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CmoCh14G013910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G013910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpalmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
Genome locationCmo_Chr14:11456134..11456911
RNA-Seq ExpressionCmoCh14G013910
SyntenyCmoCh14G013910
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (molecular function)
InterPro domainsIPR015876 - Acyl-CoA desaturase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581935.1 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2486.67Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        + LLAFGEGWHNNHHAFEYSARLGIEWWQ+DPGWYVI FL+AIGVATHVKLPSQ H Q+L
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

XP_022955955.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita moschata]1.4e-36100Show/hide
Query:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI
        LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI
Subjt:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI

XP_022955962.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita moschata]2.1e-2486.67Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        + LLAFGEGWHNNHHAFEYSARLGIEWWQ+DPGWYVI FL+AIGVATHVKLPSQ H Q+L
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

XP_022980838.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita maxima]1.1e-3191.78Show/hide
Query:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL-IHKPETPSIGI
        LVGLLAFGEGWHNNHHAFEYSAR GIEWW++DPGWYVI FLQAIGVATHVK PSQIHKQRL IHKPETPSIGI
Subjt:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL-IHKPETPSIGI

XP_023526679.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]4.7e-3291.67Show/hide
Query:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI
        LVGLLAFGEGWHNNHHAFEYSAR GIEWW++DPGWYVI FLQAIGVAT VKLPSQIHKQRLIHKP TPSIGI
Subjt:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI

TrEMBL top hitse value%identityAlignment
A0A6J1DHK1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like1.8e-2483.61Show/hide
Query:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        ++GLL FGEGWHNNHHAFEYSAR+G+EWWQ+DPGWYVI FLQ IGVATHVKLPSQ HKQ L
Subjt:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

A0A6J1GV23 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like1.0e-2486.67Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        + LLAFGEGWHNNHHAFEYSARLGIEWWQ+DPGWYVI FL+AIGVATHVKLPSQ H Q+L
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

A0A6J1GWI3 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like6.9e-37100Show/hide
Query:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI
        LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI
Subjt:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI

A0A6J1IZD1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like1.8e-2485.25Show/hide
Query:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        +V LL FGEGWHNNHHAFEYSAR+GIEWWQ+DPGWYVI FLQAIGVATHVKLPSQ H Q+L
Subjt:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

A0A6J1J0F3 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like5.1e-3291.78Show/hide
Query:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL-IHKPETPSIGI
        LVGLLAFGEGWHNNHHAFEYSAR GIEWW++DPGWYVI FLQAIGVATHVK PSQIHKQRL IHKPETPSIGI
Subjt:  LVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL-IHKPETPSIGI

SwissProt top hitse value%identityAlignment
P0DOW2 Acyl-CoA C20 Delta5-desaturase1.6e-1960.32Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHK
        + +L  GEGWHNNHHAFEYSAR GIEWWQ D  WY+I  L+ +G+AT +K+PS+IHK+++  K
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHK

P0DOW3 Acyl-CoA 5-desaturase AL211.3e-1961.9Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHK
        + +L  GEGWHNNHHAFEYSAR GIEWWQ D  WYVI  L+ +G+AT VK+PS++HK+++  K
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHK

Q949X0 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic2.3e-2173.33Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        V  LAFGEGWHNNHHAFE+SAR G+EWWQ D  WYV+ FLQAIG+AT VKLPS+  KQR+
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

Q9FV68 Icosanoyl-CoA 5-desaturase (Fragment)9.7e-2067.74Show/hide
Query:  LLVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        + V L AFGEGWHNNHHAFE SAR G+EWW+ D  WYVI  LQAIG+AT+VKLP++  KQ+L
Subjt:  LLVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

Q9LND8 Delta-9 desaturase-like 2 protein1.5e-1760Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        + LL  GE WHNNHHAFE SAR G+EW+Q D  WY+IWF QA+G+AT+VKLP+   K+++
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

Arabidopsis top hitse value%identityAlignment
AT1G06080.1 delta 9 desaturase 11.4e-1858.33Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        + + +FGE WHNNHHAFE SAR G+EWWQ D  WY++ FL+ IG+AT VKLPS+  ++R+
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

AT1G06100.1 Fatty acid desaturase family protein1.1e-1860Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        + LL  GE WHNNHHAFE SAR G+EW+Q D  WY+IWF QA+G+AT+VKLP+   K+++
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

AT1G06360.1 Fatty acid desaturase family protein7.1e-1860Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        + L   GE WHNNHHAFE SAR G+EWWQ D  WY+I   + +G+AT VKLPS+I KQ+L
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

AT3G15850.1 fatty acid desaturase 51.6e-2273.33Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL
        V  LAFGEGWHNNHHAFE+SAR G+EWWQ D  WYV+ FLQAIG+AT VKLPS+  KQR+
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRL

AT3G15870.1 Fatty acid desaturase family protein5.4e-1866.67Show/hide
Query:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQ
        V +L  GEGWHNNHHAFE+SAR G+EWWQ D  W +I FL+AIG+AT+VKLP++
Subjt:  VGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGACAAGGTATTGTTGGTAGGCTTGCTTGCATTTGGAGAAGGTTGGCACAATAACCACCATGCTTTCGAGTACTCAGCTAGGTTGGGCATTGAATGGTGGCAATT
TGACCCTGGTTGGTATGTTATTTGGTTTCTTCAAGCCATTGGAGTGGCCACTCATGTCAAATTACCCTCACAAATTCACAAGCAAAGGCTTATACACAAACCCGAAACCC
CTTCCATTGGAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGACAAGGTATTGTTGGTAGGCTTGCTTGCATTTGGAGAAGGTTGGCACAATAACCACCATGCTTTCGAGTACTCAGCTAGGTTGGGCATTGAATGGTGGCAATT
TGACCCTGGTTGGTATGTTATTTGGTTTCTTCAAGCCATTGGAGTGGCCACTCATGTCAAATTACCCTCACAAATTCACAAGCAAAGGCTTATACACAAACCCGAAACCC
CTTCCATTGGAATATAA
Protein sequenceShow/hide protein sequence
MRDKVLLVGLLAFGEGWHNNHHAFEYSARLGIEWWQFDPGWYVIWFLQAIGVATHVKLPSQIHKQRLIHKPETPSIGI