; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G013960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G013960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionribonuclease 3-like protein 1 isoform X1
Genome locationCmo_Chr14:11479752..11482205
RNA-Seq ExpressionCmoCh14G013960
SyntenyCmoCh14G013960
Gene Ontology termsGO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR014720 - Double-stranded RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581945.1 Endoribonuclease Dicer-like 4, partial [Cucurbita argyrosperma subsp. sororia]8.2e-12295.93Show/hide
Query:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
        ++ TVHYREIVGEE KNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPD+RPNEYDGVPMNPACFDSARS
Subjt:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS

Query:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
        PNARTTP+ERKENFGDSASRSSGCSHDSTKE  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
Subjt:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK

Query:  VAAEDAAEGAVWYLKHLGYGI
        +AAEDAAEGAVWYLKHLGYGI
Subjt:  VAAEDAAEGAVWYLKHLGYGI

XP_022956286.1 ribonuclease 3-like protein 1 isoform X1 [Cucurbita moschata]7.9e-12599.1Show/hide
Query:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
        MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
Subjt:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS

Query:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
        PNARTTPKERKENFGDSASRSSGCSHDSTKE  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
Subjt:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK

Query:  VAAEDAAEGAVWYLKHLGYGI
        VAAEDAAEGAVWYLKHLGYGI
Subjt:  VAAEDAAEGAVWYLKHLGYGI

XP_022956287.1 ribonuclease 3-like protein 1 isoform X2 [Cucurbita moschata]5.7e-12397.74Show/hide
Query:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
        MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
Subjt:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS

Query:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
        PNARTTPKERKENFGDSASRSSGCSHDSTKE     VKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
Subjt:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK

Query:  VAAEDAAEGAVWYLKHLGYGI
        VAAEDAAEGAVWYLKHLGYGI
Subjt:  VAAEDAAEGAVWYLKHLGYGI

XP_022956288.1 ribonuclease 3-like protein 1 isoform X3 [Cucurbita moschata]2.0e-11299Show/hide
Query:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS
        MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS
Subjt:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS

Query:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI
        SGCSHDSTKE  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI
Subjt:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI

XP_023528856.1 endoribonuclease Dicer homolog 4-like [Cucurbita pepo subsp. pepo]9.4e-11096Show/hide
Query:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS
        MENTPSCPRSVNVNLKNLPPIHNPC GNANHSSIPAKFEKSRYIGRVPQFMPPNHSPD+RPNEYDG+P+N ACFDSARSPNARTTP+ERKENFGDSASRS
Subjt:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS

Query:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI
        SGCSHDSTKE  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI
Subjt:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI

TrEMBL top hitse value%identityAlignment
A0A6J1GVX2 ribonuclease 3-like protein 1 isoform X22.8e-12397.74Show/hide
Query:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
        MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
Subjt:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS

Query:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
        PNARTTPKERKENFGDSASRSSGCSHDSTKE     VKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
Subjt:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK

Query:  VAAEDAAEGAVWYLKHLGYGI
        VAAEDAAEGAVWYLKHLGYGI
Subjt:  VAAEDAAEGAVWYLKHLGYGI

A0A6J1GW48 ribonuclease 3-like protein 1 isoform X13.8e-12599.1Show/hide
Query:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
        MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS
Subjt:  MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARS

Query:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
        PNARTTPKERKENFGDSASRSSGCSHDSTKE  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK
Subjt:  PNARTTPKERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKK

Query:  VAAEDAAEGAVWYLKHLGYGI
        VAAEDAAEGAVWYLKHLGYGI
Subjt:  VAAEDAAEGAVWYLKHLGYGI

A0A6J1GWD5 ribonuclease 3-like protein 1 isoform X39.8e-11399Show/hide
Query:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS
        MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS
Subjt:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS

Query:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI
        SGCSHDSTKE  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI
Subjt:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI

A0A6J1IQF2 ribonuclease 3-like protein 1 isoform X12.0e-10593.5Show/hide
Query:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS
        MENTPSCPRSVNVNLKNLPPIHNPC G ANHSSIPAKFEKSRYIGRVPQFMPPNHSPD+RPNEYDG+PM PACFDSARSPNARTTP+ERKENFGDSA RS
Subjt:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS

Query:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI
        SG SHDSTKE  GTSVKKSAKSLLYEICT NHWKPPLFECCEEEGPSHAKKYTFKVIVEMKG CGEDLECYG PQTRKKVAAEDAAEGAVWYLKHLGYGI
Subjt:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI

A0A6J1IY75 ribonuclease 3-like protein 1 isoform X21.9e-10392Show/hide
Query:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS
        MENTPSCPRSVNVNLKNLPPIHNPC G ANHSSIPAKFEKSRYIGRVPQFMPPNHSPD+RPNEYDG+PM PACFDSARSPNARTTP+ERKENFGDSA RS
Subjt:  MENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRS

Query:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI
        SG SHDSTKE     VKKSAKSLLYEICT NHWKPPLFECCEEEGPSHAKKYTFKVIVEMKG CGEDLECYG PQTRKKVAAEDAAEGAVWYLKHLGYGI
Subjt:  SGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYGI

SwissProt top hitse value%identityAlignment
A7LFZ6 Endoribonuclease Dicer homolog 41.5e-2253.49Show/hide
Query:  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY
        G  V K+A+S L+E+C AN+WKPP F+ C+EEGPSH +K+T+KV+VE+KG     LEC+   + +KK A E AA+GA+W LK LG+
Subjt:  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY

P84634 Dicer-like protein 41.5e-2255.81Show/hide
Query:  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY
        G    K+AKSLL+E C AN WKPP FECCEEEGP H K + +KVI+E++      LECYG+ +  KK AAE AA+ A+W LKH G+
Subjt:  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY

Q8LMR2 Endoribonuclease Dicer homolog 12.9e-0536.36Show/hide
Query:  KSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAA
        +  L +IC    W  P + C  E GP+HAK++ + V V    D G   EC G+P    K A + AA
Subjt:  KSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAA

Q9M8N2 Ribonuclease 3-like protein 14.2e-2030.77Show/hide
Query:  RSVNVNLKNLPPIHNPCVGNANHSSIPA--KFEKSRYIGRVPQFMPPN----HSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRSSG
        RS+ ++LK++PP+        + SSIP+     +  +   + +F           D   + +  + ++P    S  S   +  PK  +E+        + 
Subjt:  RSVNVNLKNLPPIHNPCVGNANHSSIPA--KFEKSRYIGRVPQFMPPN----HSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRSSG

Query:  CSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGED-LECYGKPQTRKKVAAEDAAEGAVWYLKHL
         +   +K+    + + SAKS+L+E+C +  W+PP++ECC  +GP H + +T+KV+VE++   G+  LEC+G P+ +KK AAE AAEGA+WYL+H+
Subjt:  CSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGED-LECYGKPQTRKKVAAEDAAEGAVWYLKHL

Q9SP32 Endoribonuclease Dicer homolog 12.9e-0532Show/hide
Query:  KERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAA
        KE+  N G++        + + K G     +   +  L +IC   +W  P + C +E GP+HAK++TF V V    D G   EC G+P    K A + AA
Subjt:  KERKENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAA

Arabidopsis top hitse value%identityAlignment
AT1G80650.1 RNAse THREE-like protein 13.0e-2130.77Show/hide
Query:  RSVNVNLKNLPPIHNPCVGNANHSSIPA--KFEKSRYIGRVPQFMPPN----HSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRSSG
        RS+ ++LK++PP+        + SSIP+     +  +   + +F           D   + +  + ++P    S  S   +  PK  +E+        + 
Subjt:  RSVNVNLKNLPPIHNPCVGNANHSSIPA--KFEKSRYIGRVPQFMPPN----HSPDVRPNEYDGVPMNPACFDSARSPNARTTPKERKENFGDSASRSSG

Query:  CSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGED-LECYGKPQTRKKVAAEDAAEGAVWYLKHL
         +   +K+    + + SAKS+L+E+C +  W+PP++ECC  +GP H + +T+KV+VE++   G+  LEC+G P+ +KK AAE AAEGA+WYL+H+
Subjt:  CSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGED-LECYGKPQTRKKVAAEDAAEGAVWYLKHL

AT4G00420.1 Double-stranded RNA-binding domain (DsRBD)-containing protein1.9e-2052.69Show/hide
Query:  STKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCG-EDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY
        +T+  T  + + SAKS LY +C+  HWK PL+E    EGP H K +T KV VEMK D     LEC+G PQ +KK+AAE AAE A+WYLK++GY
Subjt:  STKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCG-EDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY

AT4G00420.2 Double-stranded RNA-binding domain (DsRBD)-containing protein2.5e-2056.63Show/hide
Query:  KKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCG-EDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY
        + SAKS LY +C+  HWK PL+E    EGP H K +T KV VEMK D     LEC+G PQ +KK+AAE AAE A+WYLK++GY
Subjt:  KKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCG-EDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY

AT5G20320.1 dicer-like 41.1e-2355.81Show/hide
Query:  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY
        G    K+AKSLL+E C AN WKPP FECCEEEGP H K + +KVI+E++      LECYG+ +  KK AAE AA+ A+W LKH G+
Subjt:  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY

AT5G20320.2 dicer-like 41.1e-2355.81Show/hide
Query:  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY
        G    K+AKSLL+E C AN WKPP FECCEEEGP H K + +KVI+E++      LECYG+ +  KK AAE AA+ A+W LKH G+
Subjt:  GTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAGACAGTACACTACAGAGAGATCGTCGGAGAAGAGCGGAAGAATCGAGAAAATCAGATGGAGAACACTCCTTCCTGTCCTCGAAGTGTGAATGTCAATCTCAA
AAATCTTCCTCCAATTCATAATCCGTGTGTTGGAAATGCAAATCACTCCTCGATTCCGGCTAAATTTGAGAAATCGAGGTATATTGGGCGCGTTCCTCAGTTTATGCCAC
CTAATCACTCGCCGGATGTAAGGCCGAACGAATATGATGGCGTGCCGATGAACCCGGCGTGTTTTGATTCTGCTCGTTCTCCTAATGCGAGGACGACTCCGAAGGAAAGG
AAAGAGAATTTCGGGGATTCAGCTTCGAGGTCCAGTGGTTGCAGTCATGACTCGACCAAAGAAGGTACCGGTACTTCAGTAAAGAAATCGGCGAAGTCCCTTCTGTATGA
GATATGCACTGCAAATCACTGGAAGCCTCCTCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCACGCAAAAAAGTACACATTCAAGGTTATTGTAGAGATGAAGGGAG
ATTGTGGAGAAGATTTGGAATGCTATGGAAAACCTCAAACAAGAAAGAAAGTAGCAGCAGAGGATGCGGCAGAAGGAGCAGTATGGTATTTAAAGCATTTGGGGTATGGT
ATTTAA
mRNA sequenceShow/hide mRNA sequence
TATTATTATGCTTCTGTTGCTTTGAATTCTCTGTTTTCTGATTTTGCTCTGTGAAATTGATGTTTCAGACAGTACACTACAGAGAGATCGTCGGAGAAGAGCGGAAGAAT
CGAGAAAATCAGATGGAGAACACTCCTTCCTGTCCTCGAAGTGTGAATGTCAATCTCAAAAATCTTCCTCCAATTCATAATCCGTGTGTTGGAAATGCAAATCACTCCTC
GATTCCGGCTAAATTTGAGAAATCGAGGTATATTGGGCGCGTTCCTCAGTTTATGCCACCTAATCACTCGCCGGATGTAAGGCCGAACGAATATGATGGCGTGCCGATGA
ACCCGGCGTGTTTTGATTCTGCTCGTTCTCCTAATGCGAGGACGACTCCGAAGGAAAGGAAAGAGAATTTCGGGGATTCAGCTTCGAGGTCCAGTGGTTGCAGTCATGAC
TCGACCAAAGAAGGTACCGGTACTTCAGTAAAGAAATCGGCGAAGTCCCTTCTGTATGAGATATGCACTGCAAATCACTGGAAGCCTCCTCTGTTTGAATGCTGCGAGGA
AGAAGGTCCAAGCCACGCAAAAAAGTACACATTCAAGGTTATTGTAGAGATGAAGGGAGATTGTGGAGAAGATTTGGAATGCTATGGAAAACCTCAAACAAGAAAGAAAG
TAGCAGCAGAGGATGCGGCAGAAGGAGCAGTATGGTATTTAAAGCATTTGGGGTATGGTATTTAAGAATAATTAATTAAGGGAATTGTAAAGAGCTAGAAATGGGAAGTG
AGTGATCATTTTGAACCCAAGACTCTTTTTCAGGGCATAAAATTATTTTCCAATTGCTAGAAAAGAATTCCATATTCTATATCCAATCTTCTCATATCTTTTTGTCACCC
CTAATCAAGTAAGTGGGTGGGTAGGAAGGATCATGACTATGAGCCATG
Protein sequenceShow/hide protein sequence
MFQTVHYREIVGEERKNRENQMENTPSCPRSVNVNLKNLPPIHNPCVGNANHSSIPAKFEKSRYIGRVPQFMPPNHSPDVRPNEYDGVPMNPACFDSARSPNARTTPKER
KENFGDSASRSSGCSHDSTKEGTGTSVKKSAKSLLYEICTANHWKPPLFECCEEEGPSHAKKYTFKVIVEMKGDCGEDLECYGKPQTRKKVAAEDAAEGAVWYLKHLGYG
I