; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G014010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G014010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSAM domain-containing protein
Genome locationCmo_Chr14:11498057..11499113
RNA-Seq ExpressionCmoCh14G014010
SyntenyCmoCh14G014010
Gene Ontology termsNA
InterPro domainsIPR013761 - Sterile alpha motif/pointed domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018370.1 hypothetical protein SDJN02_20238, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-55100Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
        MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS

Query:  KALVLVPKSTYA
        KALVLVPKSTYA
Subjt:  KALVLVPKSTYA

XP_022955907.1 uncharacterized protein LOC111457752 isoform X1 [Cucurbita moschata]6.6e-55100Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
        MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS

Query:  KALVLVPKSTYA
        KALVLVPKSTYA
Subjt:  KALVLVPKSTYA

XP_022955908.1 uncharacterized protein LOC111457752 isoform X2 [Cucurbita moschata]4.5e-88100Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
        MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS

Query:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL
        KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL
Subjt:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL

XP_022979618.1 uncharacterized protein LOC111479293 [Cucurbita maxima]7.2e-7895.09Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
        MDWFLWLSRT LHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFT RDQDDS
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS

Query:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSV
        KALVLVPKSTY AFPVRFC  SGRRRG  RRRSRMVTGGMASRRSVDAAV+GNWECFTVSFSV
Subjt:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSV

XP_023528181.1 uncharacterized protein LOC111791171 isoform X2 [Cucurbita pepo subsp. pepo]2.0e-8397.02Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
        MDWFLWLSRT LHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIR+FT+RDQDDS
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS

Query:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL
        KALVLVPKSTYAAFPVRFCM SGRRRGG RRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL
Subjt:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL

TrEMBL top hitse value%identityAlignment
A0A5A7TQT5 Uncharacterized protein1.8e-4279.13Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQ--D
        MDWF WLS+T LHP+LVYEYGLALA+N+LE EDI YFNHEFLQSIGISIAKHRLEILKL RK+ AL PRPITR+LLA+K TKRRFANLIR+FT+ D   +
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQ--D

Query:  DSKALVLVPKSTYAA
        +SKALVLVPKS+YAA
Subjt:  DSKALVLVPKSTYAA

A0A5D3E0J4 Uncharacterized protein1.8e-4279.13Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQ--D
        MDWF WLS+T LHP+LVYEYGLALA+N+LE EDI YFNHEFLQSIGISIAKHRLEILKL RK+ AL PRPITR+LLA+K TKRRFANLIR+FT+ D   +
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQ--D

Query:  DSKALVLVPKSTYAA
        +SKALVLVPKS+YAA
Subjt:  DSKALVLVPKSTYAA

A0A6J1GUX0 uncharacterized protein LOC111457752 isoform X13.2e-55100Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
        MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS

Query:  KALVLVPKSTYA
        KALVLVPKSTYA
Subjt:  KALVLVPKSTYA

A0A6J1GVB2 uncharacterized protein LOC111457752 isoform X22.2e-88100Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
        MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS

Query:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL
        KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL
Subjt:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL

A0A6J1IWS8 uncharacterized protein LOC1114792933.5e-7895.09Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS
        MDWFLWLSRT LHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFT RDQDDS
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDS

Query:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSV
        KALVLVPKSTY AFPVRFC  SGRRRG  RRRSRMVTGGMASRRSVDAAV+GNWECFTVSFSV
Subjt:  KALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein5.1e-2950Show/hide
Query:  WFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRP----RPITRLLLAVKSTKRRFANLIRSFTYRDQD
        WF WLSRT L P+L++EYGL+ + N+LE EDI YF+HEFLQS+GISIAKHRLEILKLAR+D    P    R I+R++ A+K T++  ++ +R++  R+++
Subjt:  WFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRP----RPITRLLLAVKSTKRRFANLIRSFTYRDQD

Query:  --DSKALVLVPKSTYAAFPVRFCMGSGRRRGG---RRRRSRMVTGG
           S+ALVLVPK T          G G+ RGG   R +RS M + G
Subjt:  --DSKALVLVPKSTYAAFPVRFCMGSGRRRGG---RRRRSRMVTGG

AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein1.6e-3051.41Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKD---TALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQ
        MDWF WLSRT L  +L+YEYGL+ ++N+LE EDI YFNHEFLQS+GISIAKHRLEILKLAR+D   + L  R I R+L+A+K T + F+  +R++  R +
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKD---TALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQ

Query:  DDSKALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGG
        + S+ALV+V +ST ++       G+GR +  R++R  M + G
Subjt:  DDSKALVLVPKSTYAAFPVRFCMGSGRRRGGRRRRSRMVTGG

AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1)9.0e-1848.86Show/hide
Query:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDT----ALRPRPITRLLLAV--KSTK
        MDWF WLS+T L P L YEYGL  A  +L+ EDI  FNH FL+ +G+++ KHR+EILKL++++T    +   RP++  L++V  K+TK
Subjt:  MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDT----ALRPRPITRLLLAV--KSTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGTTCTTATGGCTTTCAAGAACACCTTTACATCCTGCTCTGGTCTACGAGTACGGCCTTGCCCTAGCCCATAACCAGCTTGAGCGAGAAGATATCCGCTATTT
CAACCACGAATTTCTTCAGAGTATCGGAATCTCCATTGCCAAGCACCGTCTCGAGATCCTCAAGCTCGCTCGCAAGGACACCGCACTTCGTCCCCGTCCGATCACTCGTC
TTCTTCTCGCTGTTAAGAGTACCAAGCGCCGTTTTGCTAATCTAATTCGTAGTTTCACTTATCGGGATCAAGACGACTCCAAAGCCCTAGTTCTTGTTCCGAAATCTACT
TACGCGGCTTTTCCGGTCCGATTCTGTATGGGCTCCGGCCGGAGGAGAGGAGGAAGAAGAAGAAGAAGCAGAATGGTTACTGGAGGAATGGCGTCCAGGAGATCAGTGGA
TGCTGCTGTGTATGGGAATTGGGAATGCTTCACTGTTTCTTTCTCAGTGGCAGAAGACAAGCTTTAG
mRNA sequenceShow/hide mRNA sequence
CACAGAGAAACAAGAAGAAGAAGAAGAAGAACACATGGATTGGTTCTTATGGCTTTCAAGAACACCTTTACATCCTGCTCTGGTCTACGAGTACGGCCTTGCCCTAGCCC
ATAACCAGCTTGAGCGAGAAGATATCCGCTATTTCAACCACGAATTTCTTCAGAGTATCGGAATCTCCATTGCCAAGCACCGTCTCGAGATCCTCAAGCTCGCTCGCAAG
GACACCGCACTTCGTCCCCGTCCGATCACTCGTCTTCTTCTCGCTGTTAAGAGTACCAAGCGCCGTTTTGCTAATCTAATTCGTAGTTTCACTTATCGGGATCAAGACGA
CTCCAAAGCCCTAGTTCTTGTTCCGAAATCTACTTACGCGGCTTTTCCGGTCCGATTCTGTATGGGCTCCGGCCGGAGGAGAGGAGGAAGAAGAAGAAGAAGCAGAATGG
TTACTGGAGGAATGGCGTCCAGGAGATCAGTGGATGCTGCTGTGTATGGGAATTGGGAATGCTTCACTGTTTCTTTCTCAGTGGCAGAAGACAAGCTTTAGGAAGAAGAA
GGGTGTGATGATTCTCCCATTACCATGTTTGTTTCTCTGTTTCTGGAGTATGATTCGTTCGTTCGTTCGTTCGTTCGTTCATGCCTTTAGCTCTCTGTTCTAACAGGCTC
AATGAATGGGATGTTGATTTGTTGAGTAGATATCATGATCTCCGCCAAACCCAGCTTTTGTGCTTGTGGTTCGAGG
Protein sequenceShow/hide protein sequence
MDWFLWLSRTPLHPALVYEYGLALAHNQLEREDIRYFNHEFLQSIGISIAKHRLEILKLARKDTALRPRPITRLLLAVKSTKRRFANLIRSFTYRDQDDSKALVLVPKST
YAAFPVRFCMGSGRRRGGRRRRSRMVTGGMASRRSVDAAVYGNWECFTVSFSVAEDKL