; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G014640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G014640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmembrane-associated 30 kDa protein, chloroplastic
Genome locationCmo_Chr14:11858049..11865918
RNA-Seq ExpressionCmoCh14G014640
SyntenyCmoCh14G014640
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
InterPro domainsIPR007157 - PspA/IM30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018428.1 Membrane-associated 30 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]6.5e-16386.91Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGG--------------------------------------------------GNIL
        MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGG                                                  GNIL
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGG--------------------------------------------------GNIL

Query:  QITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKA
        QITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKA
Subjt:  QITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKA

Query:  QFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV
        QFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV
Subjt:  QFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV

Query:  MAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        MAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  MAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

XP_022955518.1 membrane-associated 30 kDa protein, chloroplastic [Cucurbita moschata]5.5e-170100Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL

Query:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL
        PPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL

XP_022979446.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita maxima]5.1e-16898.49Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MAVQTHV+TGLALASTPSSSFQPSSSKPATLC ATKLLRTSFLNGGGNILQITEMKSLH D+SHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL

Query:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL
        PPGRTVSGSAFPVRDAEIESELNELRQKARE+
Subjt:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL

XP_023528686.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]1.6e-16999.7Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MAVQTHVFTGLALASTPSSSFQPSSSKP TLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL

Query:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL
        PPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL

XP_038882220.1 probable membrane-associated 30 kDa protein, chloroplastic [Benincasa hispida]4.2e-16295.18Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MA QTH+FTGLALAS+PSSSFQ SSSKPA+LCVATKLLRTSFLNGGGN+LQIT MKSLH D SHGCRRGGALGARM+L DRFARV+KSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKS+ADNAN+LKAQLDQQK+VVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL

Query:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL
        PPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL

TrEMBL top hitse value%identityAlignment
A0A0A0KXA3 Uncharacterized protein4.5e-16295.48Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MA QTHVFTGLALASTPSSSFQPSSSKPATLCVA+KLLRTSFLNGGGN LQIT M SLHLDRSHG RRGGALGARMNLFDR AR+VKSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQ ALQKGDDDLAREALKRRKS+ADNAN+LKAQLDQQK VVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEALGQLT DDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL

Query:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL
        PPGRTVSGSAFPVRDAEIESELNELRQ+AREL
Subjt:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL

A0A1S3BX93 membrane-associated 30 kDa protein, chloroplastic2.7e-16295.48Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MA QTHVFTGLALASTPSSSFQPSSSKP TLCVA+KLLRTSFLNGGGN LQIT MKSLHLDRSHG RRGGALGARMNLFDR AR+VKSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQ ALQKGDDDLAREALKRRKS+ADNAN+LKAQLDQQK+VVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEALGQLT DDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL

Query:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL
        PPGRTVSGSAFPVRDAEIESELNELRQ+AREL
Subjt:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL

A0A5D3D1E0 Membrane-associated 30 kDa protein1.0e-15891.33Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MA QTHVFTGLALASTPSSSFQPSSSKP TLCVA+KLLRTSFLNGGGN LQIT MKSLHLDRSHG RRGGALGARMNLFDR AR+VKSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQ ALQKGDDDLAREALKRRKS+ADNAN+LKAQLDQQK+VVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKK---
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEALGQLT DDLEGKFALLEGSSVDDELANLKKELSGSSK    
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKK---

Query:  -----------GELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
                   GELPPGRTVSGSAFPVRDAEIESELNELRQ+AREL
Subjt:  -----------GELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

A0A6J1GWI0 membrane-associated 30 kDa protein, chloroplastic2.6e-170100Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL

Query:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL
        PPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL

A0A6J1INR4 membrane-associated 30 kDa protein, chloroplastic-like2.5e-16898.49Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
        MAVQTHV+TGLALASTPSSSFQPSSSKPATLC ATKLLRTSFLNGGGNILQITEMKSLH D+SHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDP

Query:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
        EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL
Subjt:  EKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLL

Query:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL
Subjt:  ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL

Query:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL
        PPGRTVSGSAFPVRDAEIESELNELRQKARE+
Subjt:  PPGRTVSGSAFPVRDAEIESELNELRQKAREL

SwissProt top hitse value%identityAlignment
O80796 Membrane-associated protein VIPP1, chloroplastic1.4e-10768.36Show/hide
Query:  MAVQTHVFTGL--ALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFE
        MA++    TGL   L  T SSS   SS++P +L +    LRTSF       L++  ++ L  D    C      GA MNLF+RF+RVVKSYANAL+SSFE
Subjt:  MAVQTHVFTGL--ALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFE

Query:  DPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTR
        DPEKILEQTV+EMN DLTKMRQATAQVLASQK+L+NKYK+AQQ++DDWY++AQ AL KGD+DLAREALKRRKSFADNA +LK QLDQQK VV+NLVSNTR
Subjt:  DPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTR

Query:  LLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKG
        LLESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS ALSAFEKMEEKVMAMES+A+AL Q+  D+LEGKF +LE SSVDD+LA+LKKELSGSSKKG
Subjt:  LLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKG

Query:  ELPPGR-TVSGSA-FPVRDAEIESELNELRQKARE
        ELPPGR TV+ S  +P +D+EIE+ELNELR+KA +
Subjt:  ELPPGR-TVSGSA-FPVRDAEIESELNELRQKARE

Q03943 Membrane-associated 30 kDa protein, chloroplastic2.8e-11672.73Show/hide
Query:  MAVQTHVFTGLALASTPSSSFQPSSS---KPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSF
        M  +  +F+GL     PS+  QPSSS   KP    +AT L  T           +  +K   +  +   R GGA+G RMNLFDRFARVVKSYANALVS+F
Subjt:  MAVQTHVFTGLALASTPSSSFQPSSS---KPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSF

Query:  EDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNT
        EDPEKILEQ VLEMNDDLTKMRQATAQVLASQKRLENKYK+AQQA+++WYRKAQ ALQKG++DLAREALKRRKSFADNA+SLKAQLDQQK+VV+NLVSNT
Subjt:  EDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNT

Query:  RLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKK
        RLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVM MESQAEALGQLT DDLEGKFA+LE SSVDD+LANLKKEL+GSSKK
Subjt:  RLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKK

Query:  GELPPGR------TVSGSAFPVRDAEIESELNELRQKAREL
        GELPPGR      T + +  P RDA+IE EL +LR++++EL
Subjt:  GELPPGR------TVSGSAFPVRDAEIESELNELRQKAREL

Q55707 Protein sll06172.3e-4643.82Show/hide
Query:  MNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADN
        M LFDR  RVV++  N LVS  EDPEK+LEQ V++M +DL ++RQA A+ +A +KR E +     Q A  W  +A+ AL  G+++LAREAL R+KS  D 
Subjt:  MNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADN

Query:  ANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALL
        A + + QL QQ+ + ENL  N   LE+KI EA++KK+ L+ARA++AK   ++ + LG + TSSA SAFE+ME KV+ ME+ ++A G+L    +E +FA L
Subjt:  ANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALL

Query:  EGSS-VDDELANLKKELSGSSKKG---------ELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        E SS V+DELA LK  ++G +  G           P   +V  +     DA I+ EL++LR++   L
Subjt:  EGSS-VDDELANLKKELSGSSKKG---------ELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

Q8S0J7 Probable membrane-associated 30 kDa protein, chloroplastic2.2e-11373.9Show/hide
Query:  PSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLT
        P +S + +   PA+       LRTSFLNG  + L++ +++  +++R   C      G R NL DRF+RVVKSYANA++SSFEDPEKIL+Q VLEMNDDLT
Subjt:  PSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLT

Query:  KMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKA
        KMRQATAQVLASQKRLENKYK+A+QA+DDWYR+AQ ALQKGD+DLAREALKRRKS+ADNA+SLKAQLDQQK VVENLVSNTR+LESKI EA+ KKDTLKA
Subjt:  KMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKA

Query:  RAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTV---SGSAFPV
        RAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKVMAMESQAEALGQL  DDLEGKFALLE SSVDD+LA +KKE+SGSS KGELPPGRT    SG+A P 
Subjt:  RAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTV---SGSAFPV

Query:  RDAEIESELNELRQKARE
        RD EIE+ELNELR+KA E
Subjt:  RDAEIESELNELRQKARE

Q9RUB7 Phage shock protein A homolog2.1e-2334.08Show/hide
Query:  MNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADN
        M++FDR +R++++  N ++S  EDP KI++Q + +M       R   A  +A   +LE +  +  + A ++ +KA+ AL+ G +DLAREAL+R ++  D 
Subjt:  MNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADN

Query:  ANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTAD-DLEGKFA-
        A     Q   Q++ V+ L +  R LE+KI E  SKK  L AR ++A+    +  + G      A+ AF +ME+KV  ME + +A+G+L  D D + +   
Subjt:  ANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTAD-DLEGKFA-

Query:  LLEGSSVDDELANLKKELSGSSK
        L     VDD LA LK ++  S++
Subjt:  LLEGSSVDDELANLKKELSGSSK

Arabidopsis top hitse value%identityAlignment
AT1G65260.1 plastid transcriptionally active 49.8e-10968.36Show/hide
Query:  MAVQTHVFTGL--ALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFE
        MA++    TGL   L  T SSS   SS++P +L +    LRTSF       L++  ++ L  D    C      GA MNLF+RF+RVVKSYANAL+SSFE
Subjt:  MAVQTHVFTGL--ALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFE

Query:  DPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTR
        DPEKILEQTV+EMN DLTKMRQATAQVLASQK+L+NKYK+AQQ++DDWY++AQ AL KGD+DLAREALKRRKSFADNA +LK QLDQQK VV+NLVSNTR
Subjt:  DPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTR

Query:  LLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKG
        LLESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS ALSAFEKMEEKVMAMES+A+AL Q+  D+LEGKF +LE SSVDD+LA+LKKELSGSSKKG
Subjt:  LLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKG

Query:  ELPPGR-TVSGSA-FPVRDAEIESELNELRQKARE
        ELPPGR TV+ S  +P +D+EIE+ELNELR+KA +
Subjt:  ELPPGR-TVSGSA-FPVRDAEIESELNELRQKARE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCCAAACCCACGTTTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCGTTTCAACCCTCTTCTTCCAAGCCCGCTACCCTCTGTGTCGCCACAAAGCT
CTTAAGAACGTCCTTCCTTAATGGCGGAGGGAACATTTTACAAATTACAGAGATGAAATCTTTGCATCTTGATCGATCTCATGGTTGTAGACGTGGAGGTGCTCTTGGTG
CCCGCATGAACCTCTTTGACCGTTTTGCAAGGGTCGTAAAGTCATATGCAAATGCACTTGTAAGTTCCTTTGAGGATCCTGAGAAAATCCTGGAGCAGACAGTGCTTGAA
ATGAATGATGATTTGACGAAGATGCGTCAAGCCACAGCACAGGTACTAGCTTCTCAGAAGCGCTTGGAAAACAAGTACAAATCTGCACAGCAAGCTGCAGATGATTGGTA
TCGAAAGGCACAATTTGCTCTCCAAAAGGGAGATGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATTTGCTGATAATGCAAATTCTTTGAAAGCTCAACTTG
ATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACACGGCTATTAGAGAGCAAGATACAAGAGGCGAGATCAAAGAAAGACACACTGAAAGCACGTGCGCAGTCT
GCAAAGACTGCAACCAAAGTGAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTCGAGAAGATGGAAGAGAAAGTTATGGCAATGGAGTCTCAAGC
AGAAGCTCTTGGACAGTTAACTGCTGACGATCTTGAAGGAAAGTTTGCTCTGTTGGAGGGCTCATCAGTCGATGATGAGCTAGCGAACTTGAAGAAAGAGTTATCTGGAA
GCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCGTTTCCGGTTCGTGATGCCGAGATCGAGTCGGAACTGAATGAACTGAGGCAAAAAGCAAGA
GAATTGTAG
mRNA sequenceShow/hide mRNA sequence
AGAGTCGGTTTTGTTGGACCAAAAAGCCAAAAACCGTGTAGAACGAACGATTACGGAGGAACACGAGTGATTCTGTTATCTTCAATCTATCTCAACTCAACACAATTTCT
CAATTCTTTTCTGCAACATTCTTGCTTGGGCTTGGCTTGGATTGATCACTCATGGCTGTCCAAACCCACGTTTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTC
GTTTCAACCCTCTTCTTCCAAGCCCGCTACCCTCTGTGTCGCCACAAAGCTCTTAAGAACGTCCTTCCTTAATGGCGGAGGGAACATTTTACAAATTACAGAGATGAAAT
CTTTGCATCTTGATCGATCTCATGGTTGTAGACGTGGAGGTGCTCTTGGTGCCCGCATGAACCTCTTTGACCGTTTTGCAAGGGTCGTAAAGTCATATGCAAATGCACTT
GTAAGTTCCTTTGAGGATCCTGAGAAAATCCTGGAGCAGACAGTGCTTGAAATGAATGATGATTTGACGAAGATGCGTCAAGCCACAGCACAGGTACTAGCTTCTCAGAA
GCGCTTGGAAAACAAGTACAAATCTGCACAGCAAGCTGCAGATGATTGGTATCGAAAGGCACAATTTGCTCTCCAAAAGGGAGATGATGATCTTGCTCGGGAAGCTTTAA
AGAGGCGCAAATCATTTGCTGATAATGCAAATTCTTTGAAAGCTCAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACACGGCTATTAGAGAGCAAG
ATACAAGAGGCGAGATCAAAGAAAGACACACTGAAAGCACGTGCGCAGTCTGCAAAGACTGCAACCAAAGTGAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCT
TTCTGCTTTCGAGAAGATGGAAGAGAAAGTTATGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGACGATCTTGAAGGAAAGTTTGCTCTGTTGGAGG
GCTCATCAGTCGATGATGAGCTAGCGAACTTGAAGAAAGAGTTATCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCGTTTCCGGTT
CGTGATGCCGAGATCGAGTCGGAACTGAATGAACTGAGGCAAAAAGCAAGAGAATTGTAG
Protein sequenceShow/hide protein sequence
MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHLDRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLE
MNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQS
AKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAR
EL