CuGenDBv2

Gene ID	CmoCh14G014680
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	stress-associated endoplasmic reticulum protein 2-like
Genome location	Cmo_Chr14:11893424..11895976
RNA-Seq Expression	CmoCh14G014680
Synteny	CmoCh14G014680
Gene Ontology terms	GO:0006486 - protein glycosylation (biological process) GO:0006605 - protein targeting (biological process) GO:0006779 - porphyrin-containing compound biosynthetic process (biological process) GO:0030968 - endoplasmic reticulum unfolded protein response (biological process) GO:0071806 - protein transmembrane transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003723 - RNA binding (molecular function) GO:0004109 - coproporphyrinogen oxidase activity (molecular function) GO:0008320 - protein transmembrane transporter activity (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR010580 - Stress-associated endoplasmic reticulum protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAF2292900.1 hypothetical protein GH714_029713 [Hevea brasiliensis]

3.4e-23

84.38

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Query:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGM
        TTSRRLADRKVE+FEKNI KRGAVPETTTKKGKDYPVGP+LLGFF+FVVIGSYN D N+W +G+
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGM

RZB96231.1 hypothetical protein D0Y65_020164, partial [Glycine soja]

1.2e-23

79.71

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Query:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIF
        TTSRRLADRKVE+FEKNI KRG VP+TTTKKGKDYPVGP+LLGFFVFVVIGSYN D N+WR+G+   +F
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIF

THF94354.1 hypothetical protein TEA_029898 [Camellia sinensis var. sinensis]

2.0e-23

74.32

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Query:  SASQISHSVMTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGM
        +AS   ++  TTSRRLADRKVERFEKNI KRGAVPETTTKKG  YPVGP++LGFF+FVVIGSYNPD ++WR+G+
Subjt:  SASQISHSVMTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGM

TYK28997.1 KH domain-containing protein [Cucumis melo var. makuwa]

2.5e-26

87.5

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Query:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIFSSE
        TTSRRLADRKVERFEKNILKRGAVPET TKKGKDYPVGP+LLGFFVFVVIGSYN D NRWRN  MR IF+S+
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIFSSE

XP_040873531.1 ribosome associated membrane protein RAMP4 isoform X1 [Glycine max]

5.2e-24

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Query:  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIF
        MTTSRRLADRKVE+FEKNI KRG VP+TTTKKGKDYPVGP+LLGFFVFVVIGSYN D N WR+G+   +F
Subjt:  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIF

TrEMBL top hits

e value

%identity

Alignment

A0A445JCR9 Uncharacterized protein (Fragment)

5.6e-24

79.71

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Query:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIF
        TTSRRLADRKVE+FEKNI KRG VP+TTTKKGKDYPVGP+LLGFFVFVVIGSYN D N+WR+G+   +F
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIF

A0A4S4CWU8 Uncharacterized protein

9.5e-24

74.32

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Query:  SASQISHSVMTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGM
        +AS   ++  TTSRRLADRKVERFEKNI KRGAVPETTTKKG  YPVGP++LGFF+FVVIGSYNPD ++WR+G+
Subjt:  SASQISHSVMTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGM

A0A5D3DYM9 KH domain-containing protein

1.2e-26

87.5

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Query:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIFSSE
        TTSRRLADRKVERFEKNILKRGAVPET TKKGKDYPVGP+LLGFFVFVVIGSYN D NRWRN  MR IF+S+
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIFSSE

A0A6A6KV46 Uncharacterized protein

1.6e-23

84.38

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Query:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGM
        TTSRRLADRKVE+FEKNI KRGAVPETTTKKGKDYPVGP+LLGFF+FVVIGSYN D N+W +G+
Subjt:  TTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGM

I1KS28 Uncharacterized protein

2.5e-24

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Query:  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIF
        MTTSRRLADRKVE+FEKNI KRG VP+TTTKKGKDYPVGP+LLGFFVFVVIGSYN D N WR+G+   +F
Subjt:  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIF

SwissProt top hits

e value

%identity

Alignment

Q3T073 Stress-associated endoplasmic reticulum protein 2

3.6e-04

53.66

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Query:  ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS
        E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS
Subjt:  ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS

Q6TAW2 Stress-associated endoplasmic reticulum protein 2

3.6e-04

53.66

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Query:  ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS
        E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS
Subjt:  ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS

Q8N6R1 Stress-associated endoplasmic reticulum protein 2

3.6e-04

53.66

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Query:  ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS
        E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS
Subjt:  ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS

Arabidopsis top hits

e value

%identity

Alignment

AT1G27330.1 Ribosome associated membrane protein RAMP4

6.8e-22

88.68

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Query:  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS
        MTTS+RLADRK+E+F+KNILKRG VPETTTKKGKDYPVGP+LLGFFVFVVIGS
Subjt:  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS

AT1G27350.1 Ribosome associated membrane protein RAMP4

6.8e-22

88.68

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Query:  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS
        MTTS+RLADRK+E+F+KNILKRG VPETTTKKGKDYPVGP+LLGFFVFVVIGS
Subjt:  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGS

Sequences

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CDS sequence

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ATGGCGGGTGACCTACCCACGAAATCTGAAGAACTCGTCCCCATTTTTCATCTCCAGTTCAATTCCGCCTCCCAGATCTCCCACTCAGTAATGACGACATCGCGGCGTCT
TGCGGATCGGAAGGTGGAGAGGTTCGAGAAGAACATTTTGAAGAGAGGGGCCGTGCCCGAGACTACTACAAAGAAGGGAAAGGACTATCCTGTTGGTCCTCTTCTTCTTG
GATTCTTCGTCTTTGTCGTCATTGGATCATATAATCCGGACGGCAACAGGTGGAGGAATGGCATGATGAGAGGCATCTTCAGTTCTGAGTGGGCATATGGCGTTTTCATT
CTTTGA

mRNA sequence

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Protein sequence

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MAGDLPTKSEELVPIFHLQFNSASQISHSVMTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSYNPDGNRWRNGMMRGIFSSEWAYGVFI
L

CmoCh14G014680 (gene) of Cucurbita moschata (Rifu) v1 genome