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CmoCh14G014950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G014950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNuclear transport factor 2B
Genome locationCmo_Chr14:12008131..12009104
RNA-Seq ExpressionCmoCh14G014950
SyntenyCmoCh14G014950
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582033.1 hypothetical protein SDJN03_22035, partial [Cucurbita argyrosperma subsp. sororia]3.2e-7398.72Show/hide
Query:  MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL
        MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSG DDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL
Subjt:  MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL

Query:  VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA
        VSAMVVL VAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA
Subjt:  VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA

XP_022956151.1 uncharacterized protein LOC111457933 [Cucurbita moschata]3.4e-83100Show/hide
Query:  MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL
        MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL
Subjt:  MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL

Query:  VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPACLTSCEPTRFSLE
        VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPACLTSCEPTRFSLE
Subjt:  VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPACLTSCEPTRFSLE

XP_022979951.1 uncharacterized protein LOC111479485 [Cucurbita maxima]5.8e-6795.3Show/hide
Query:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVL
        MAEAAAEEMELISLAIRRLMEE NNRT SHRSSGG+DLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKN+TEKEIVKEIKEV+RQNFITHCLVSAMVVL
Subjt:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVL

Query:  NVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA
         VAWQVSEVSFILKLRDGLSNPFK+LARILKRNTTSAIQHKIEATELPA
Subjt:  NVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA

XP_023526027.1 uncharacterized protein LOC111789626 [Cucurbita pepo subsp. pepo]3.0e-7196.15Show/hide
Query:  MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL
        +GKENQRMAEAAAEEMELISLAIRRLMEEN NRTASHRS GGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEV+RQNFITHCL
Subjt:  MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL

Query:  VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA
        VSA VVL VAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA
Subjt:  VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA

XP_038895500.1 uncharacterized protein LOC120083719 [Benincasa hispida]1.1e-4670.76Show/hide
Query:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGD--DLQFLSRLLSQVESTREQGRRKHS-----QQDDKIIQ-------KNV---------TEKEIV
        MAE A EEMELISLAIRRLMEE++NRTASHRSSG D  DLQ LSRLLSQVESTRE+ R  HS     Q+D+KII+       +NV          EK IV
Subjt:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGD--DLQFLSRLLSQVESTREQGRRKHS-----QQDDKIIQ-------KNV---------TEKEIV

Query:  KEIKEVQRQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELP
        KE+KEV+RQNFITHCLVSAM++L VAWQVSEVSFILKLR+GLSNPFK+L  ILKR TTSAIQH+IEATELP
Subjt:  KEIKEVQRQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELP

TrEMBL top hitse value%identityAlignment
A0A0A0KTW6 Uncharacterized protein1.1e-4466.67Show/hide
Query:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSS------GGDDLQFLSRLLSQVESTREQGRRKHSQQDD-KIIQKN---------------VTEKEIVK
        MAEAAA EMELISLAIRRLMEEN +RT SHRSS        DD+Q LSRLLS+VESTR + R  HS+Q+D +II+ N               +  +EIVK
Subjt:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSS------GGDDLQFLSRLLSQVESTREQGRRKHSQQDD-KIIQKN---------------VTEKEIVK

Query:  EIKEVQRQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP
        E+KEV++QNFITHCLVSAM++L VAWQ+SEVSFILKLRDG LSNPFK+LA ILKR TTSAIQH+IEATELP
Subjt:  EIKEVQRQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP

A0A1S3BXR6 uncharacterized protein LOC1034945623.3e-4465.29Show/hide
Query:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSS----GGDDLQFLSRLLSQVESTREQGRRKH--SQQDDKIIQKN---------------VTEKEIVKE
        M +AA EEMELISLAIRRLMEEN NRT SHRSS      DD+Q LS+LLS+VESTRE+ R  H   Q+D +II+ N               V  +EIVKE
Subjt:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSS----GGDDLQFLSRLLSQVESTREQGRRKH--SQQDDKIIQKN---------------VTEKEIVKE

Query:  IKEVQRQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP
        +KEV++QNF+THCLVSAM++L VAWQ+SEVSFILKLRDG LSNPFK+L  ILKR TTSAIQH+IEATELP
Subjt:  IKEVQRQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP

A0A5A7TSP6 Uncharacterized protein5.3e-4265.43Show/hide
Query:  MELISLAIRRLMEENNNRTASHRSS----GGDDLQFLSRLLSQVESTREQGRRKH--SQQDDKIIQKN---------------VTEKEIVKEIKEVQRQN
        MELISLAIRRLMEEN NRT SHRSS      DD+Q LS+LLS+VESTRE+ R  H   Q+D +II+ N               V  +EIVKE+KEV++QN
Subjt:  MELISLAIRRLMEENNNRTASHRSS----GGDDLQFLSRLLSQVESTREQGRRKH--SQQDDKIIQKN---------------VTEKEIVKEIKEVQRQN

Query:  FITHCLVSAMVVLNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP
        F+THCLVSAM++L VAWQ+SEVSFILKLRDG LSNPFK+L  ILKR TTSAIQH+IEATELP
Subjt:  FITHCLVSAMVVLNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP

A0A6J1GVS4 uncharacterized protein LOC1114579331.6e-83100Show/hide
Query:  MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL
        MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL
Subjt:  MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCL

Query:  VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPACLTSCEPTRFSLE
        VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPACLTSCEPTRFSLE
Subjt:  VSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPACLTSCEPTRFSLE

A0A6J1IS75 uncharacterized protein LOC1114794852.8e-6795.3Show/hide
Query:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVL
        MAEAAAEEMELISLAIRRLMEE NNRT SHRSSGG+DLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKN+TEKEIVKEIKEV+RQNFITHCLVSAMVVL
Subjt:  MAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVL

Query:  NVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA
         VAWQVSEVSFILKLRDGLSNPFK+LARILKRNTTSAIQHKIEATELPA
Subjt:  NVAWQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein7.9e-1434.93Show/hide
Query:  AAEEMELISLAIRRLMEENNNRTASHRS--SGGDDLQFLSRLLSQVESTREQGR---------RKHSQQDDKIIQKNVTE---------KEIVKEIKEVQ
        ++E++E +S AI +L+ E   R AS  +     DD  FLS L+SQ+ES   +G+          K  +  D    K  +E         +EI K+IK+V+
Subjt:  AAEEMELISLAIRRLMEENNNRTASHRS--SGGDDLQFLSRLLSQVESTREQGR---------RKHSQQDDKIIQKNVTE---------KEIVKEIKEVQ

Query:  RQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARIL
        +QN ITH L+SA ++L + WQ+SE S I  L+D +S+P +++  +L
Subjt:  RQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNLARIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAAGAAAACCAGAGGATGGCGGAAGCGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGGTTGATGGAAGAGAACAACAACAGAACCGCCTCTCA
CCGGAGCTCCGGCGGCGACGATCTGCAATTCCTCTCCCGATTACTCTCTCAGGTGGAATCAACCAGAGAACAGGGGCGGCGCAAGCACTCCCAACAGGATGATAAAATAA
TTCAGAAAAACGTAACAGAGAAGGAGATAGTGAAAGAGATAAAAGAAGTGCAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCCGCCATGGTTGTCCTCAACGTTGCT
TGGCAAGTTTCTGAGGTGTCCTTTATTTTGAAGCTCAGAGATGGGTTGAGTAACCCATTCAAGAACCTGGCTAGAATTCTGAAAAGAAACACAACTTCAGCAATACAACA
TAAGATTGAAGCTACTGAATTGCCTGCCTGCCTTACCTCATGTGAACCTACCAGATTTTCACTTGAATGA
mRNA sequenceShow/hide mRNA sequence
AAGGGAATGAGTGACAACAAACCATTCGAAAGCCACCACGTGTCAAAGAGCAATTGGAGGACGTTCCACTAGGAAAACGATACGACTCTGCTGCCGGAGGAAGCGGAGAG
GGGAGGGTGGAGAAGCAGAAAATAAAATGGGTAAAGAAAACCAGAGGATGGCGGAAGCGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGGTTGATGGAA
GAGAACAACAACAGAACCGCCTCTCACCGGAGCTCCGGCGGCGACGATCTGCAATTCCTCTCCCGATTACTCTCTCAGGTGGAATCAACCAGAGAACAGGGGCGGCGCAA
GCACTCCCAACAGGATGATAAAATAATTCAGAAAAACGTAACAGAGAAGGAGATAGTGAAAGAGATAAAAGAAGTGCAGAGGCAGAATTTCATAACTCACTGCCTTGTTT
CCGCCATGGTTGTCCTCAACGTTGCTTGGCAAGTTTCTGAGGTGTCCTTTATTTTGAAGCTCAGAGATGGGTTGAGTAACCCATTCAAGAACCTGGCTAGAATTCTGAAA
AGAAACACAACTTCAGCAATACAACATAAGATTGAAGCTACTGAATTGCCTGCCTGCCTTACCTCATGTGAACCTACCAGATTTTCACTTGAATGACCACAAAATCCAGT
AGTAGCATCATCAAGATCCCAAGTTGTTTGTAATTTTTCAGGCATTATAACAATGTCTGTAATTTTTTATCATTCATATTTCAATTTTCATGCTGTAGAAGTTCAAAGTT
TCGATTTTTACGACGGGTATAATAGCATATAGTAGTATGAGCAAATCACTTGAATTTGAAGAAAGCA
Protein sequenceShow/hide protein sequence
MGKENQRMAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVLNVA
WQVSEVSFILKLRDGLSNPFKNLARILKRNTTSAIQHKIEATELPACLTSCEPTRFSLE