; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G015110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G015110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibonuclease
Genome locationCmo_Chr14:12113749..12124598
RNA-Seq ExpressionCmoCh14G015110
SyntenyCmoCh14G015110
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:2000640 - positive regulation of SREBP signaling pathway (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR019352 - SREBP regulating gene protein
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582048.1 Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]9.8e-14499.61Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSK LKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

XP_004152096.1 ribonuclease H2 subunit A [Cucumis sativus]1.8e-13794.88Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLK+LSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

XP_022955431.1 ribonuclease H2 subunit A [Cucurbita moschata]3.4e-144100Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]2.4e-14298.43Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSK LKEEKREELFEGLK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]3.7e-14399.21Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSK LKEEKREELFEGLK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ4 Ribonuclease8.6e-13894.88Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLK+LSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

A0A1S3BXP1 Ribonuclease4.3e-13794.88Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

A0A5A7TT92 Ribonuclease4.3e-13794.88Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

A0A6J1GTR5 Ribonuclease1.6e-144100Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

A0A6J1IPY0 Ribonuclease1.2e-14298.43Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSK LKEEKREELFEGLK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
        TTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSG

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A4.2e-6547.88Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISH
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSK L E +RE LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SH
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISH

Query:  DSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKC
        D+A GL+   L  GV +T+V+VDTVG PE Y+ +L + FP ++  V  KAD+LYPVVS ASI AKV RD+ ++ W   E  +++  ++GSGYP DP TK 
Subjt:  DSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKC

Query:  WLEDHKHSVFGFPTLVRFSWGTC-TSYFKDIVEVSWE-SDKVDEDGATGGSGYVCDASS
        WL++H   VFGFP  VRFSW T  T   K+  +V WE S   +++G    + Y  +  S
Subjt:  WLEDHKHSVFGFPTLVRFSWGTC-TSYFKDIVEVSWE-SDKVDEDGATGGSGYVCDASS

Q2TBT5 Ribonuclease H2 subunit A2.7e-6447.43Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINL
        +SS  P P    +PCV+G+DEAGRGPVLGPMVY   YC  S L++L +L  ADSK L E +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NL
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINL

Query:  NEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGD
        N +SHD+A GLV   L  GV + +V+VDTVG PE Y+ +L ++FP ++  V  KAD+LYPVVS ASI AKV RD+ +++W   E  +++  ++GSGYP D
Subjt:  NEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGD

Query:  PTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVE-VSWESDKVDEDGATGGSGYVCDASSFDPMSRCCL
        P TK WL  H   VFGFP  VRFSW T  S  +   E V WE     E G   G G +   S F    + CL
Subjt:  PTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVE-VSWESDKVDEDGATGGSGYVCDASSFDPMSRCCL

Q5U209 Ribonuclease H2 subunit A1.4e-6548.57Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSK L E +RE LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS

Query:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTK
        HD+A GL+   +   V +T+V+VDTVG PE Y+ +L ++FP ++  V  KADSL+PVVS ASI+AKV RD+ +++W   E+ + +  ++GSGYP DP TK
Subjt:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTK

Query:  CWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED
         WL  H   VFGFP  VRFSW T  +   K+   V+WE    +ED
Subjt:  CWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED

Q9CWY8 Ribonuclease H2 subunit A3.2e-6549.39Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSK L E +RE LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS

Query:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTK
        HD+A GL+   L   V +T+V+VDTVG PE Y+ +L + FP ++  V  KADSL+PVVS ASI AKV RD+ +++W   E  +++  ++GSGYP DP TK
Subjt:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTK

Query:  CWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED
         WL  H   VFGFP  VRFSW T  +   K+  +V WE  + +ED
Subjt:  CWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED

Q9SEZ6 Ribonuclease H2 subunit A2.4e-10870.99Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSK LKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDR L++W +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGYVCDASSF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G    S      SSF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGYVCDASSF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-10970.99Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSK LKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDR L++W +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGYVCDASSF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G    S      SSF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGYVCDASSF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-9866.03Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSK LKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML        
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
                    KVL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDR L++W +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGYVCDASSF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G    S      SSF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGYVCDASSF

AT3G59390.1 unknown protein2.1e-7561.58Show/hide
Query:  GYVCDASSFDPMSRCCLGKGEKFPCHGCNLVSQCCNSYEYCVSCCQDPSRTKREQILKIKIAKPSTAGTYAGVFDFCVGRCRHNSESVVHENAYRSDYHH
        G VCDA S +  +RCC  KGE+F CHGCN++SQCCNSYE+CVSCC +PS+T  E+++K+K+AKP+T+GTY  VFDFC GRCRHNSESVVHENAY S++HH
Subjt:  GYVCDASSFDPMSRCCLGKGEKFPCHGCNLVSQCCNSYEYCVSCCQDPSRTKREQILKIKIAKPSTAGTYAGVFDFCVGRCRHNSESVVHENAYRSDYHH

Query:  CFSLPSYSSGVNGTELEFKLNGVNVIIGRQGESCDSVCKTNGQSCIPNKLMVLNHCNIMQKYLSCKGGCLPSVGPDQPAEVAYNSPKELF
        CFSL S +SG N T++E +L G++VI+G QG+SCD+VCK+ GQ C+ NKL +LN C++M++Y++CKG CL S G DQPAEV  ++P++L+
Subjt:  CFSLPSYSSGVNGTELEFKLNGVNVIIGRQGESCDSVCKTNGQSCIPNKLMVLNHCNIMQKYLSCKGGCLPSVGPDQPAEVAYNSPKELF

AT3G59390.2 unknown protein2.1e-7561.58Show/hide
Query:  GYVCDASSFDPMSRCCLGKGEKFPCHGCNLVSQCCNSYEYCVSCCQDPSRTKREQILKIKIAKPSTAGTYAGVFDFCVGRCRHNSESVVHENAYRSDYHH
        G VCDA S +  +RCC  KGE+F CHGCN++SQCCNSYE+CVSCC +PS+T  E+++K+K+AKP+T+GTY  VFDFC GRCRHNSESVVHENAY S++HH
Subjt:  GYVCDASSFDPMSRCCLGKGEKFPCHGCNLVSQCCNSYEYCVSCCQDPSRTKREQILKIKIAKPSTAGTYAGVFDFCVGRCRHNSESVVHENAYRSDYHH

Query:  CFSLPSYSSGVNGTELEFKLNGVNVIIGRQGESCDSVCKTNGQSCIPNKLMVLNHCNIMQKYLSCKGGCLPSVGPDQPAEVAYNSPKELF
        CFSL S +SG N T++E +L G++VI+G QG+SCD+VCK+ GQ C+ NKL +LN C++M++Y++CKG CL S G DQPAEV  ++P++L+
Subjt:  CFSLPSYSSGVNGTELEFKLNGVNVIIGRQGESCDSVCKTNGQSCIPNKLMVLNHCNIMQKYLSCKGGCLPSVGPDQPAEVAYNSPKELF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGCAAGATCCACTCCCGAAATGGGCATCGAAGCCTTGTGTAATGGGCATCGACGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTA
CTGCACTCGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAGCATTAAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGGATTGAAGACTAATGAGT
CAATTGGATGGGCTGTTGATGTCATAGATCCTCGGGAACTTTCATCCAAAATGCTAAATAAAGTGAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTG
GTTACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTATCTGAAAAATTTCCCAATGTAAA
ATTTGTAGTTGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTTGCAAAGGTCACAAGAGATCGTGTGTTGCGGGATTGGGCATTGGAGGAAA
CAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACATTGGTC
CGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACATTGTTGAAGTATCATGGGAATCAGACAAAGTGGATGAAGATGGGGCTACGGGTGGAAGTGGCTATGTATG
TGATGCTTCGTCTTTTGATCCAATGTCTCGTTGCTGCCTAGGGAAAGGGGAAAAATTTCCTTGTCATGGATGCAATCTTGTTTCACAATGTTGTAATTCCTACGAATATT
GTGTTTCATGCTGCCAGGATCCTTCAAGGACAAAAAGGGAGCAAATACTAAAAATAAAAATTGCTAAGCCTTCCACTGCAGGGACATATGCCGGTGTGTTTGATTTCTGT
GTTGGGAGGTGTCGTCATAATTCGGAGAGTGTTGTGCACGAAAATGCTTATCGCAGCGATTACCATCATTGCTTTTCTCTGCCGTCATATTCTTCAGGAGTCAATGGCAC
GGAACTAGAATTCAAACTCAACGGCGTCAACGTCATTATTGGAAGACAAGGAGAGTCATGTGATTCAGTTTGCAAGACAAATGGACAATCATGCATCCCAAACAAGCTTA
TGGTCCTAAATCACTGTAACATTATGCAAAAATACTTGAGCTGCAAAGGAGGTTGCTTACCAAGTGTTGGGCCTGATCAACCTGCTGAAGTTGCTTATAATTCTCCTAAA
GAACTGTTTACTTTTAAGGAATTCCATCAGTTTCATGCAGCAGATAGAAGGAAGTTGAAGGAGATCGAAAAACGGCGAATTGTAGAACTAGTTAAGACATATTTCTGTTC
ATGTGTTGAACTCGAATAG
mRNA sequenceShow/hide mRNA sequence
AAAACGCTCAAGAGGGGAAGTGAGATTTGGTAGTAAACTGACGTAGTGAGAAGAACTCAGCAATGTCTTCGCAAGATCCACTCCCGAAATGGGCATCGAAGCCTTGTGTA
ATGGGCATCGACGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCACTCGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGA
CTCAAAAGCATTAAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGGATTGAAGACTAATGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGGGAACTTTCATCCA
AAATGCTAAATAAAGTGAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTTACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTG
GATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTATCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGG
GGCAAGCATAGTTGCAAAGGTCACAAGAGATCGTGTGTTGCGGGATTGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATC
CAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACATTGGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACATTGTTGAA
GTATCATGGGAATCAGACAAAGTGGATGAAGATGGGGCTACGGGTGGAAGTGGCTATGTATGTGATGCTTCGTCTTTTGATCCAATGTCTCGTTGCTGCCTAGGGAAAGG
GGAAAAATTTCCTTGTCATGGATGCAATCTTGTTTCACAATGTTGTAATTCCTACGAATATTGTGTTTCATGCTGCCAGGATCCTTCAAGGACAAAAAGGGAGCAAATAC
TAAAAATAAAAATTGCTAAGCCTTCCACTGCAGGGACATATGCCGGTGTGTTTGATTTCTGTGTTGGGAGGTGTCGTCATAATTCGGAGAGTGTTGTGCACGAAAATGCT
TATCGCAGCGATTACCATCATTGCTTTTCTCTGCCGTCATATTCTTCAGGAGTCAATGGCACGGAACTAGAATTCAAACTCAACGGCGTCAACGTCATTATTGGAAGACA
AGGAGAGTCATGTGATTCAGTTTGCAAGACAAATGGACAATCATGCATCCCAAACAAGCTTATGGTCCTAAATCACTGTAACATTATGCAAAAATACTTGAGCTGCAAAG
GAGGTTGCTTACCAAGTGTTGGGCCTGATCAACCTGCTGAAGTTGCTTATAATTCTCCTAAAGAACTGTTTACTTTTAAGGAATTCCATCAGTTTCATGCAGCAGATAGA
AGGAAGTTGAAGGAGATCGAAAAACGGCGAATTGTAGAACTAGTTAAGACATATTTCTGTTCATGTGTTGAACTCGAATAG
Protein sequenceShow/hide protein sequence
MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEEKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGL
VTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLV
RFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGYVCDASSFDPMSRCCLGKGEKFPCHGCNLVSQCCNSYEYCVSCCQDPSRTKREQILKIKIAKPSTAGTYAGVFDFC
VGRCRHNSESVVHENAYRSDYHHCFSLPSYSSGVNGTELEFKLNGVNVIIGRQGESCDSVCKTNGQSCIPNKLMVLNHCNIMQKYLSCKGGCLPSVGPDQPAEVAYNSPK
ELFTFKEFHQFHAADRRKLKEIEKRRIVELVKTYFCSCVELE