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CmoCh14G015780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G015780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein RALF-like 32
Genome locationCmo_Chr14:12574286..12574621
RNA-Seq ExpressionCmoCh14G015780
SyntenyCmoCh14G015780
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582127.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5698.2Show/hide
Query:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
        MTTRI KSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGE+ETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
Subjt:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

KAG7018527.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-5697.3Show/hide
Query:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
        MTTRI KSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGE+ETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYT+SGSCAPPPANPYNRG
Subjt:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

XP_022956250.1 protein RALF-like 32 [Cucurbita moschata]9.4e-58100Show/hide
Query:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
        MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
Subjt:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

XP_023528073.1 protein RALF-like 32 [Cucurbita pepo subsp. pepo]2.0e-5596.4Show/hide
Query:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
        MTTRI KSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGE+ETLMESEISRRFL QQKKYISIGALKKDHPACDGGGGGQPYT+SGSCAPPPANPYNRG
Subjt:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

XP_038900965.1 protein RALF-like 32 [Benincasa hispida]1.1e-4586.11Show/hide
Query:  KSCFL---LFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSK
        +SCFL   LFLLL+QDLCLVRA SKHSCNGSIAECG E+E LMESEISRRFL Q KKYISIGALKKDHPACDG GGGQPYTKSGSC PPP NPY RGCSK
Subjt:  KSCFL---LFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSK

Query:  IYRCRSDD
        IYRCRSDD
Subjt:  IYRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L624 Uncharacterized protein3.7e-2872.45Show/hide
Query:  KSCFLLFL---LLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKK-YISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
        ++CFLL L    L+QDLCLVR SS HSCNGSIAEC  E+E LMESEI+RRFLAQQKK YIS   LKKD PACD G  GQPYTKSGSC P  ANPYN G
Subjt:  KSCFLLFL---LLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKK-YISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG

A0A0A0L9A8 Uncharacterized protein2.9e-4482.57Show/hide
Query:  KSCFL----LFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCS
        ++CFL    LFL L QDLCLVRASS HSCNGSIA C  E+E LMESEI+RRFL QQKKYISIGALKKDHPACDG  GGQPYT+SGSCAPPPANPYNRGCS
Subjt:  KSCFL----LFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCS

Query:  KIYRCRSDD
        KIYRCRSDD
Subjt:  KIYRCRSDD

A0A5A7VKE5 Protein RALF-like 328.9e-4690.1Show/hide
Query:  LLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD
        LLFL L+QDLCLVRASS HSCNGSIAECG EDE LMESEISRRFLAQQKKYISIGALKKDHPACDG  GG+PYTKSGSCAPPPANPY+RGC KIYRCRSD
Subjt:  LLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD

Query:  D
        D
Subjt:  D

A0A6J1C9Y4 protein RALF-like 326.2e-3980.39Show/hide
Query:  FLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRS
        FLL L L+Q LCL+RAS    CNGSIAEC  E E LMESEISRRFL QQKKYISIGALKKD PACDG G GQPYTKSGSC PPP+NPY+RGCSKIYRCRS
Subjt:  FLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRS

Query:  DD
        DD
Subjt:  DD

A0A6J1GXB3 protein RALF-like 324.5e-58100Show/hide
Query:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
        MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG
Subjt:  MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 321.2e-1846.02Show/hide
Query:  TRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDET-----LMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPY
        +RI  +  + FL L+      +ASS   CNGS+AEC    ET     +MES  S+R   +Q   +S GAL+++ PACDGG  G+ Y  S  C PPP+NPY
Subjt:  TRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDET-----LMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPY

Query:  NRGCSKIYRCRSD
        +RGCSK YRC  D
Subjt:  NRGCSKIYRCRSD

Q8L9P8 Protein RALF-like 335.8e-1048.15Show/hide
Query:  CNGSIAECG---GEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR
        CNG+IAEC     E+E  M+SEI+RR LA   KYIS GAL+++   C   G      + G+     ANPY+RGCS I RCR
Subjt:  CNGSIAECG---GEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR

Q945T0 Rapid alkalinization factor8.9e-1148.84Show/hide
Query:  ASSKHSCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRS
        A S   C GSI EC  E+E   ++SE +RR LA  KKYIS GAL+K+   C   G      K G+     ANPY+RGCS I RCRS
Subjt:  ASSKHSCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRS

Q9MA62 Protein RALF-like 224.0e-1147.31Show/hide
Query:  LCLVRASSK---HSCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR
        L  VRA S      C GSIAEC  E+E +  +S+ISRR LA QKKYIS GA++++   C   G      + G+     ANPY+RGCS I RCR
Subjt:  LCLVRASSK---HSCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR

Q9SRY3 Protein RALF-like 11.8e-1150.63Show/hide
Query:  CNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRS
        C+GSIAEC G +E  M+SEI+RR LA   KYIS  +LK++   C   G      ++G+     ANPY+RGCSKI RCRS
Subjt:  CNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.3e-1250.63Show/hide
Query:  CNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRS
        C+GSIAEC G +E  M+SEI+RR LA   KYIS  +LK++   C   G      ++G+     ANPY+RGCSKI RCRS
Subjt:  CNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRS

AT3G05490.1 ralf-like 222.8e-1247.31Show/hide
Query:  LCLVRASSK---HSCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR
        L  VRA S      C GSIAEC  E+E +  +S+ISRR LA QKKYIS GA++++   C   G      + G+     ANPY+RGCS I RCR
Subjt:  LCLVRASSK---HSCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR

AT3G16570.1 rapid alkalinization factor 238.6e-0941.05Show/hide
Query:  CNGSIAEC---------------GGE--DETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR
        C G+IAEC               GGE  +E  M+SEI+RR LA  ++YIS GAL+++   C   G      + G+     ANPY+RGCS I RCR
Subjt:  CNGSIAEC---------------GGE--DETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR

AT4G14010.1 ralf-like 328.3e-2046.02Show/hide
Query:  TRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDET-----LMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPY
        +RI  +  + FL L+      +ASS   CNGS+AEC    ET     +MES  S+R   +Q   +S GAL+++ PACDGG  G+ Y  S  C PPP+NPY
Subjt:  TRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDET-----LMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPY

Query:  NRGCSKIYRCRSD
        +RGCSK YRC  D
Subjt:  NRGCSKIYRCRSD

AT4G15800.1 ralf-like 334.1e-1148.15Show/hide
Query:  CNGSIAECG---GEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR
        CNG+IAEC     E+E  M+SEI+RR LA   KYIS GAL+++   C   G      + G+     ANPY+RGCS I RCR
Subjt:  CNGSIAECG---GEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACAAGAATCCCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAAGCACTCTTGCAATGGCTCCATAGCTGA
GTGTGGTGGTGAAGACGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAGCAAAAGAAATATATCTCTATTGGAGCTTTGAAAAAGGATCACCCAGCTT
GTGATGGGGGTGGCGGTGGTCAACCTTACACTAAAAGCGGAAGCTGCGCTCCGCCGCCAGCAAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGAC
GATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACAAGAATCCCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAAGCACTCTTGCAATGGCTCCATAGCTGA
GTGTGGTGGTGAAGACGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAGCAAAAGAAATATATCTCTATTGGAGCTTTGAAAAAGGATCACCCAGCTT
GTGATGGGGGTGGCGGTGGTCAACCTTACACTAAAAGCGGAAGCTGCGCTCCGCCGCCAGCAAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGAC
GATTGA
Protein sequenceShow/hide protein sequence
MTTRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD
D