; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G015880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G015880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionchromatin structure-remodeling complex protein BSH
Genome locationCmo_Chr14:12614066..12619772
RNA-Seq ExpressionCmoCh14G015880
SyntenyCmoCh14G015880
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0000228 - nuclear chromosome (cellular component)
GO:0070603 - SWI/SNF superfamily-type complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR006939 - SNF5/SMARCB1/INI1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582138.1 Chromatin structure-remodeling complex protein BSH, partial [Cucurbita argyrosperma subsp. sororia]5.8e-10298.95Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIHSKFQSFEGQDMYSGETVISIKLDL
        MEALASAHSKAPFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIHSKFQSFEGQDMYSGETVISIKLDL
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIHSKFQSFEGQDMYSGETVISIKLDL

Query:  RVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSKFEHVPASKTGGASVDLVKLF
        RVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSKFEHVPASKTGGASVDLVKLF
Subjt:  RVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSKFEHVPASKTGGASVDLVKLF

XP_004147636.1 chromatin structure-remodeling complex protein BSH [Cucumis sativus]1.3e-8271.67Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS
        M+A AS HSKAPFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN SDPDSE  +  K   +  K  P  I     +I S   +F+SFEGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQ LWDLNNYESDPEEFS T CKDLGI+DPEVGPAIA  IREQLYEIAVQNV S+RESRMSK     FEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ERTAR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

XP_008439008.1 PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo]1.1e-8170.83Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS
        M+A AS HSKAPFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN SDPDSE  +  K   +  K  P  I     +I S   +F+SFEGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNT+IKDQ LWDLNNYESDPEEFS T CKDLGI+DPEVGPAIA  IREQLYEIAVQNV S+RESRMSK     FEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ER AR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

XP_022138105.1 chromatin structure-remodeling complex protein BSH isoform X1 [Momordica charantia]1.3e-8270.42Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNC--TIHS---KFQSFEGQDMYSGETVIS
        M+A ASAHSK PFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN SDPDSE  +  +   +    P  + T    +I S   +F+SFEGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNC--TIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQ LWDLNNYESDPEEFS T CKDLGIEDPEVGPA+A  IREQLYEIA+QNV S+RESRMSK     FEHVPASK GGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ERTAR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

XP_038898737.1 chromatin structure-remodeling complex protein BSH [Benincasa hispida]4.2e-8472.92Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS
        M+A AS HSKAPFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN SDPDSE  +  K   +  K  P  I     +I S   +F+SFEGQDMYSGE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQ LWDLNNYESDPEEFS TFCKDLGIEDPEVGPAIA  IREQLYEIAVQNV S+RESRMSK     FEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ERTAR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

TrEMBL top hitse value%identityAlignment
A0A0A0L868 Uncharacterized protein6.5e-8371.67Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS
        M+A AS HSKAPFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN SDPDSE  +  K   +  K  P  I     +I S   +F+SFEGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQ LWDLNNYESDPEEFS T CKDLGI+DPEVGPAIA  IREQLYEIAVQNV S+RESRMSK     FEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ERTAR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

A0A1S3AXP6 chromatin structure-remodeling complex protein BSH isoform X15.5e-8270.83Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS
        M+A AS HSKAPFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN SDPDSE  +  K   +  K  P  I     +I S   +F+SFEGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNT+IKDQ LWDLNNYESDPEEFS T CKDLGI+DPEVGPAIA  IREQLYEIAVQNV S+RESRMSK     FEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ER AR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

A0A5A7UEL5 Chromatin structure-remodeling complex protein BSH isoform X15.5e-8270.83Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS
        M+A AS HSKAPFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN SDPDSE  +  K   +  K  P  I     +I S   +F+SFEGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNT+IKDQ LWDLNNYESDPEEFS T CKDLGI+DPEVGPAIA  IREQLYEIAVQNV S+RESRMSK     FEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ER AR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

A0A6J1C8H9 chromatin structure-remodeling complex protein BSH isoform X16.5e-8370.42Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNC--TIHS---KFQSFEGQDMYSGETVIS
        M+A ASAHSK PFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN SDPDSE  +  +   +    P  + T    +I S   +F+SFEGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNC--TIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQ LWDLNNYESDPEEFS T CKDLGIEDPEVGPA+A  IREQLYEIA+QNV S+RESRMSK     FEHVPASK GGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ERTAR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

A0A6J1I8S2 chromatin structure-remodeling complex protein BSH8.0e-8169.58Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS
        M++ ASA+SK+PFKFRIPTAE L+PIRLDIEIDGQRFKDAFTWN +DPDSE  +  K   +  K  P  I     +I S   +F+SFEGQDMY+GE +I+
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGAL-CKEDGERFKASPV-IYNTNCTIHS---KFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLI+DQ LWDLNNYESDPEEFS TFCKDLGIEDPEVGPAIA  IREQLYEIAVQNV S+RESR+SK     FEHV ASKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKDWD Y+PI+DLLSNE+ +ALE++ ER AR
Subjt:  ----ECNRIRKDWDNYQPIIDLLSNEKANALESERERTAR

SwissProt top hitse value%identityAlignment
P93045 Chromatin structure-remodeling complex protein BSH2.3e-6957.08Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIH-----SKFQSFEGQDMYSGETVIS
        M+ L S   K P KFR+PTAE L+PIRLDI+ +GQR+KDAFTWN SDPD+E  +  +   +    P  + T          S F+++EGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIH-----SKFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVN+TLIKDQ LWDLNN+ESDPEEF+ T CKDLG+EDPEVGPA+AF IREQLYEIA+Q+V S+RESR+SK      +H  ASK  G S+DL+KLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ECN----RIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKD D Y+P++DLL++E+ +ALE+  ER AR
Subjt:  ECN----RIRKDWDNYQPIIDLLSNEKANALESERERTAR

Q5BIN2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 13.1e-1331.37Show/hide
Query:  HSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSD----PDSEGALCKEDGERFKASPVIY--NTNCTIHSKFQSFEGQDMYSGET--VISIKLD
        H  A         E L+PIRLD+EIDGQ+ +DAFTWN ++    P+    +  +D      +P+ +       I  + +S+    +   ++   + IKL+
Subjt:  HSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSD----PDSEGALCKEDGERFKASPVIY--NTNCTIHSKFQSFEGQDMYSGET--VISIKLD

Query:  LRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQL
        + V N  + DQ  WD++  E+ PE+F++  C +LG+   E    IA+ IR QL
Subjt:  LRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQL

Q5U379 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A3.1e-1332.03Show/hide
Query:  HSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSD----PDSEGALCKEDGERFKASPVIY--NTNCTIHSKFQSFEGQDMYSG--ETVISIKLD
        H  A         E L+PIRLD+EIDGQ+ +DAFTWN ++    P+    +  +D      SP+ +       I  + +S+    +     +  + IKL+
Subjt:  HSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSD----PDSEGALCKEDGERFKASPVIY--NTNCTIHSKFQSFEGQDMYSG--ETVISIKLD

Query:  LRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQL
        + V N  + DQ  WD++  E+ PE+F++  C +LG+   E    IA+ IR QL
Subjt:  LRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQL

Q5ZK40 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 13.1e-1331.37Show/hide
Query:  HSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSD----PDSEGALCKEDGERFKASPVIY--NTNCTIHSKFQSFEGQDMYSGET--VISIKLD
        H  A         E L+PIRLD+EIDGQ+ +DAFTWN ++    P+    +  +D      +P+ +       I  + +S+    +   ++   + IKL+
Subjt:  HSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSD----PDSEGALCKEDGERFKASPVIY--NTNCTIHSKFQSFEGQDMYSGET--VISIKLD

Query:  LRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQL
        + V N  + DQ  WD++  E+ PE+F++  C +LG+   E    IA+ IR QL
Subjt:  LRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQL

Q6DFM1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 11.8e-1331.37Show/hide
Query:  HSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSD----PDSEGALCKEDGERFKASPVIY--NTNCTIHSKFQSFEGQDMYSGET--VISIKLD
        H  A        +E L+PIRLD+EIDGQ+ +DAFTWN ++    P+    +  +D      +P+ +       I  + +S+    +   ++   + IKL+
Subjt:  HSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSD----PDSEGALCKEDGERFKASPVIY--NTNCTIHSKFQSFEGQDMYSGET--VISIKLD

Query:  LRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQL
        + V N  + DQ  WD++  E+ PE+F++  C +LG+   E    IA+ IR QL
Subjt:  LRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQL

Arabidopsis top hitse value%identityAlignment
AT3G17590.1 transcription regulatory protein SNF5, putative (BSH)1.6e-7057.08Show/hide
Query:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIH-----SKFQSFEGQDMYSGETVIS
        M+ L S   K P KFR+PTAE L+PIRLDI+ +GQR+KDAFTWN SDPD+E  +  +   +    P  + T          S F+++EGQDMY+GE +I 
Subjt:  MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIH-----SKFQSFEGQDMYSGETVIS

Query:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF
        IKLDLRVN+TLIKDQ LWDLNN+ESDPEEF+ T CKDLG+EDPEVGPA+AF IREQLYEIA+Q+V S+RESR+SK      +H  ASK  G S+DL+KLF
Subjt:  IKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVKLF

Query:  ECN----RIRKDWDNYQPIIDLLSNEKANALESERERTAR
               R RKD D Y+P++DLL++E+ +ALE+  ER AR
Subjt:  ECN----RIRKDWDNYQPIIDLLSNEKANALESERERTAR

AT3G17590.2 transcription regulatory protein SNF5, putative (BSH)2.4e-6957.02Show/hide
Query:  MEALASAHSKAPFKFRI--PTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIH-----SKFQSFEGQDMYSGETV
        M+ L S   K P KFRI  PTAE L+PIRLDI+ +GQR+KDAFTWN SDPD+E  +  +   +    P  + T          S F+++EGQDMY+GE +
Subjt:  MEALASAHSKAPFKFRI--PTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIH-----SKFQSFEGQDMYSGETV

Query:  ISIKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVK
        I IKLDLRVN+TLIKDQ LWDLNN+ESDPEEF+ T CKDLG+EDPEVGPA+AF IREQLYEIA+Q+V S+RESR+SK      +H  ASK  G S+DL+K
Subjt:  ISIKLDLRVNNTLIKDQSLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSK-----FEHVPASKTGGASVDLVK

Query:  LFECN----RIRKDWDNYQPIIDLLSNEKANALESERERTAR
        LF       R RKD D Y+P++DLL++E+ +ALE+  ER AR
Subjt:  LFECN----RIRKDWDNYQPIIDLLSNEKANALESERERTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTTGGCCTCAGCTCACTCAAAAGCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGTATCTAATGCCAATTCGTTTGGACATTGAAATCGACGGTCAGAGGTT
CAAAGATGCCTTCACCTGGAACTCTTCTGATCCAGATTCAGAGGGTGCTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCCCCGTTATTTATAACACAAATTGCA
CAATCCATTCAAAATTTCAATCCTTTGAAGGTCAAGATATGTATAGTGGTGAAACGGTCATTTCAATCAAGCTTGATCTCCGAGTGAACAATACCCTCATAAAAGATCAG
TCTCTGTGGGACTTGAACAACTATGAGAGCGACCCTGAAGAGTTTTCCATGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACCTGCAATTGCTTTTGT
AATTAGAGAACAGCTCTATGAGATAGCTGTGCAGAATGTTAATTCATCAAGAGAAAGCAGAATGAGCAAGTTTGAGCATGTTCCTGCAAGTAAAACTGGAGGTGCTTCGG
TGGACCTCGTGAAGTTATTTGAATGCAACAGGATAAGAAAGGATTGGGACAATTACCAACCAATTATTGATCTTTTGTCAAACGAGAAAGCTAATGCCCTTGAATCAGAA
AGAGAGAGGACTGCTCGGCAATATATTCTCAGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATCCAAACTCAGAGAAGCGCACTGCAATCCTTCTGAAAGCTACAGAATTGAACTCCCGAAGTAACCATGGAAGCTTTGGCCTCAGCTCACTCAAAAGCTCCTTTCAAGTT
CAGGATTCCGACGGCGGAGTATCTAATGCCAATTCGTTTGGACATTGAAATCGACGGTCAGAGGTTCAAAGATGCCTTCACCTGGAACTCTTCTGATCCAGATTCAGAGG
GTGCTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCCCCGTTATTTATAACACAAATTGCACAATCCATTCAAAATTTCAATCCTTTGAAGGTCAAGATATGTAT
AGTGGTGAAACGGTCATTTCAATCAAGCTTGATCTCCGAGTGAACAATACCCTCATAAAAGATCAGTCTCTGTGGGACTTGAACAACTATGAGAGCGACCCTGAAGAGTT
TTCCATGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACCTGCAATTGCTTTTGTAATTAGAGAACAGCTCTATGAGATAGCTGTGCAGAATGTTAATT
CATCAAGAGAAAGCAGAATGAGCAAGTTTGAGCATGTTCCTGCAAGTAAAACTGGAGGTGCTTCGGTGGACCTCGTGAAGTTATTTGAATGCAACAGGATAAGAAAGGAT
TGGGACAATTACCAACCAATTATTGATCTTTTGTCAAACGAGAAAGCTAATGCCCTTGAATCAGAAAGAGAGAGGACTGCTCGGCAATATATTCTCAGTTGTTGATCATA
TCACTTCTATGGTCTAAGGTAAACTATCTGACACGGATGAAGTTGTTAGGCAATTGTTCTTGCTGTTTTAACACATAATTAACATCCTTTAACTTTCCAAGTTACAGGAT
TTCATAGCAATTCTTCATTGTAAGCCTATAAATCTAGCTGTTTAGTATGGTTATAAACTCTCTGAGCTCTGATAATGACATGGGTAGCACTTCTGACATGAATTTCATTC
TTACTTTTTTTTTGTTTTTGATAGCATACTCAGAACCATTCCAAAAGTTACTGAAAGACCGACTCATAAAGGATGAATTTGTTCCATTCAGCTGACAAGTGAAGAAAATT
TTCAAAAGCCAAAAGTTCTTTGATAGAATCATGGATGATATGGAGCAGTTCTTTGAGCAGTTCTTCGATAGAATCATGGATGATAAGAGACTGATATGTCACCAACTAAA
AGTTGGGGAATAATTTGCTCAATTTACTTCATGAAACCAATCATGTGCCCAAATTGAATTCGATTGGACGATATGGATAACATTGTGAAAAATGCAAATGGAAGGATAGA
GCTCTGAAAAAGGCCTTCACGAGAAGCCCATCCAAATCCCTATCTTCCTTCCTCACATATCTATGAAAATGATAGAAAGAGATATTTTGTACGGACTGAAATAGACCTCA
ATAGTGGTGTGGCAGTTGAATTTTGTGGCTCAAAATTCGAGTTGGATGAGATATTTTTTGTAACGGAAACAAAAGTAACCATAGTTTAATTCAAAATTACACCAAATATC
TTTATAATTCCGAAATAAATTATGAAAATTGCCG
Protein sequenceShow/hide protein sequence
MEALASAHSKAPFKFRIPTAEYLMPIRLDIEIDGQRFKDAFTWNSSDPDSEGALCKEDGERFKASPVIYNTNCTIHSKFQSFEGQDMYSGETVISIKLDLRVNNTLIKDQ
SLWDLNNYESDPEEFSMTFCKDLGIEDPEVGPAIAFVIREQLYEIAVQNVNSSRESRMSKFEHVPASKTGGASVDLVKLFECNRIRKDWDNYQPIIDLLSNEKANALESE
RERTARQYILSC