; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G016610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G016610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCAP-Gly domain-containing linker protein 1-like
Genome locationCmo_Chr14:13114491..13116567
RNA-Seq ExpressionCmoCh14G016610
SyntenyCmoCh14G016610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018617.1 hypothetical protein SDJN02_20487 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6090.32Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPSAAVPAPLSA             ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEIS+KEDAGEATKEG GSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
XP_008438879.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo]3.8e-5786.45Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSAK ENLTPIGSKI+ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVD NET+HQHPA   +KEDA EA K+  G TEEKGNEA N
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
XP_022956216.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata]7.1e-72100Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
XP_022979959.1 CAP-Gly domain-containing linker protein 1 [Cucurbita maxima]1.9e-6997.42Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPS   PAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEG GSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
XP_023527984.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]8.7e-7097.42Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPSAA PAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEIS+KEDA EATKEGRGSTEEKGNE GN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
TrEMBL top hitse value%identityAlignment
A0A1S3AXE8 CAP-Gly domain-containing linker protein 1 isoform X14.5e-5685.9Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSAK ENLTPIGSKI+ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLG-LQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLG LQDVSVD NET+HQHPA   +KEDA EA K+  G TEEKGNEA N
Subjt:  DVTTSLRNLG-LQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
A0A1S3AY29 CAP-Gly domain-containing linker protein 1 isoform X21.8e-5786.45Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSAK ENLTPIGSKI+ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVD NET+HQHPA   +KEDA EA K+  G TEEKGNEA N
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
A0A5D3D134 CAP-Gly domain-containing linker protein 1 isoform X21.8e-5786.45Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSAK ENLTPIGSKI+ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVD NET+HQHPA   +KEDA EA K+  G TEEKGNEA N
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
A0A6J1GVY7 CAP-Gly domain-containing linker protein 1-like3.5e-72100Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
A0A6J1IY17 CAP-Gly domain-containing linker protein 19.4e-7097.42Show/hide
Query:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPS   PAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEG GSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15790.1 unknown protein6.5e-3156.55Show/hide
Query:  MAD--ADSSSPSA--AVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQ
        MAD  +DS+SP A  +V +P + K +N  P+ SK++ELNESRAELLNRIQ+LKQDLQ+WR KLDTQV  YR ELS LKK+LN+EVE LR EF++L+TTL 
Subjt:  MAD--ADSSSPSA--AVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQ

Query:  QQQEDVTTSLRNLGLQD--VSVD-NNETRHQHPAEISEKEDAGEA
        QQQ+DV+ SL++LGLQD    +D  +E   +    +S  ++A EA
Subjt:  QQQEDVTTSLRNLGLQD--VSVD-NNETRHQHPAEISEKEDAGEA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGCCGACTCTTCCTCTCCCTCCGCCGCTGTCCCAGCTCCTCTATCGGCTAAAAATGAGAATCTAACTCCCATTGGATCGAAAATTTCGGAATTGAACGAATC
AAGAGCGGAGTTGCTTAATAGAATTCAATCTCTTAAGCAGGATCTTCAGAATTGGAGGTCAAAGCTAGACACGCAAGTTAATACCTACCGGAGTGAACTCTCTGAACTCA
AGAAATCACTTAATGTTGAGGTCGAGCACCTTCGAACGGAATTCCAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGACGTGACTACCAGCCTGAGGAACTTGGGT
CTTCAGGATGTTTCCGTGGACAATAACGAGACTCGACATCAACATCCAGCAGAAATCAGCGAGAAAGAAGATGCAGGCGAGGCAACGAAGGAAGGTCGTGGCTCGACGGA
GGAAAAGGGGAATGAAGCTGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
CGTCCCCATCTCCTTTTAATTTTCCTCTCTTCTCTTTCCTCCATTTTTTGAATTTCGATTTCATCCCATCCCCTTCTCAAAACCCTAATTTTCAGTTCAACAGATTCGGT
TCCATTCGATCCCTGCTTCTATGGCGGACGCCGACTCTTCCTCTCCCTCCGCCGCTGTCCCAGCTCCTCTATCGGCTAAAAATGAGAATCTAACTCCCATTGGATCGAAA
ATTTCGGAATTGAACGAATCAAGAGCGGAGTTGCTTAATAGAATTCAATCTCTTAAGCAGGATCTTCAGAATTGGAGGTCAAAGCTAGACACGCAAGTTAATACCTACCG
GAGTGAACTCTCTGAACTCAAGAAATCACTTAATGTTGAGGTCGAGCACCTTCGAACGGAATTCCAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGACGTGACTA
CCAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCCGTGGACAATAACGAGACTCGACATCAACATCCAGCAGAAATCAGCGAGAAAGAAGATGCAGGCGAGGCAACGAAG
GAAGGTCGTGGCTCGACGGAGGAAAAGGGGAATGAAGCTGGAAATTAAGAGGCACTTTGTAGCATGTAGGTTGTAAGTTTTTCATTGCATGATAAGATAACATTAGCAGC
AGCTCTCTCGGCTATGGATTTCCACAATGTTTACTGTTTAAATTTCAATGCTTGTAATGGGTTTCTTTTCAATATTTCCCATTGAGGGTTCTATGAGATCTCCCTTTAGC
TCACTCTCTACCTCTATCCTTCTCTCTAAACAACTTAATGATGGTCG
Protein sequenceShow/hide protein sequence
MADADSSSPSAAVPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG
LQDVSVDNNETRHQHPAEISEKEDAGEATKEGRGSTEEKGNEAGN