; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G016940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G016940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL28
Genome locationCmo_Chr14:13315019..13319831
RNA-Seq ExpressionCmoCh14G016940
SyntenyCmoCh14G016940
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0007283 - spermatogenesis (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR003954 - RNA recognition motif domain, eukaryote
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582250.1 Serine/arginine-rich SC35-like splicing factor SCL28, partial [Cucurbita argyrosperma subsp. sororia]4.5e-10799.05Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+YRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSRLDLICHTYSATSKTKIIIVLLFPLL
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSRLDLICHTYS TSKTKIIIVLLFPLL
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSRLDLICHTYSATSKTKIIIVLLFPLL

Query:  LTSIPCFEIL
        LTSIPCFEIL
Subjt:  LTSIPCFEIL

XP_008438778.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28 [Cucumis melo]6.7e-8798.29Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+YRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRS RRRSPARSPRRRY SYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

XP_022955785.1 serine/arginine-rich SC35-like splicing factor SCL28 [Cucurbita moschata]7.2e-89100Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

XP_022979912.1 serine/arginine-rich SC35-like splicing factor SCL28 [Cucurbita maxima]1.6e-8899.43Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+YRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

XP_023527505.1 serine/arginine-rich SC35-like splicing factor SCL28 [Cucurbita pepo subsp. pepo]1.6e-8899.43Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+YRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

TrEMBL top hitse value%identityAlignment
A0A1S3AXW0 serine/arginine-rich SC35-like splicing factor SCL283.3e-8798.29Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+YRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRS RRRSPARSPRRRY SYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

A0A5D3CXM8 Serine/arginine-rich SC35-like splicing factor SCL283.3e-8798.29Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+YRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRS RRRSPARSPRRRY SYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

A0A6J1C7W4 serine/arginine-rich SC35-like splicing factor SCL286.8e-8596Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+YRSRSRSYSPRRRSR+PPRGRKRYDDDPRDRY ESRS+RDRRSPAPSGLLVRNLPLDARPEDLR PFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRS RRRSPARSPRRRY SYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

A0A6J1GW11 serine/arginine-rich SC35-like splicing factor SCL283.5e-89100Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

A0A6J1IQ05 serine/arginine-rich SC35-like splicing factor SCL287.7e-8999.43Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+YRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSR

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL285.2e-5870.45Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+ RSRSRSYSPR R R+PPR RK YDD   +R RE  S RD  S  PSGLL+RNLPLDARP DLR  FERFGP+KD+YLP+NYYTGEPRGFGFVK+R+
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEA +++NH VIGGREI IVFAEENRKTPQEMR T+ +SGR    +R+  RSPRRRY S+SRS SP R +SR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL307.8e-3048.37Show/hide
Query:  YSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQ
        YSP RR     RGR      PR  Y        RR  +   LLVRN+PLD RPE+LR PFERFGPV+DVY+P++YY+G+PRGF FV+F  A DA EA++ 
Subjt:  YSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQ

Query:  LNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR---SSRRRSPARSPRRRYHSYSRSPSPAR-HDSRLDLICHTYSATSKTK
        +N     GREI +V A E+RK P+EMRV +R+  R    SR RS  RS   R  S SRS SP R  DSR      +YS   + +
Subjt:  LNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR---SSRRRSPARSPRRRYHSYSRSPSPAR-HDSRLDLICHTYSATSKTK

Q8WXF0 Serine/arginine-rich splicing factor 122.6e-1743.94Show/hide
Query:  PAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSR-SSGR
        P  + L +RN+    RPEDLR  F R+GP+ DVY+P ++YT  PRGF +V+F    DA +A   LN   + GR+I I FA+ +RKTP +M+   R     
Subjt:  PAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSR-SSGR

Query:  SSRRRSPARSPRRRYHSYSRSPSPARHDSRLD
        S  RRS  RSP +R  + SRS S  R+  R D
Subjt:  SSRRRSPARSPRRRYHSYSRSPSPARHDSRLD

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A2.6e-3353.89Show/hide
Query:  RSRSYSPRRRSRTPPR--GRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDA
        R RSY+P     +PPR  GR+     PR R+  SR      S  P+ LLVRNL  D R EDLR PFE+FGPVKD+YLP++YYTG+PRGFGF++F    DA
Subjt:  RSRSYSPRRRSRTPPR--GRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDA

Query:  AEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPAR
        AEAK Q++  ++ GRE+ +VFAEENRK P EMR   R  GRS+R +   RSP R    YSRSP P R
Subjt:  AEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPAR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.3e-3252.35Show/hide
Query:  RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAE
        R RSY+P     +PPRG  R    P  R R     RD     P+ LLVRNL  D R EDLR  FE+FGPVKD+YLP++YYTG+PRGFGFV+F    DAA+
Subjt:  RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAE

Query:  AKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AK  ++  ++ GRE+ +VFAEENRK P EMR   R  GR   RRR+P      RY+S SRSP P R  SR
Subjt:  AKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 339.2e-3452.35Show/hide
Query:  RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAE
        R RSY+P     +PPRG  R    P  R R     RD     P+ LLVRNL  D R EDLR  FE+FGPVKD+YLP++YYTG+PRGFGFV+F    DAA+
Subjt:  RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAE

Query:  AKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AK  ++  ++ GRE+ +VFAEENRK P EMR   R  GR   RRR+P      RY+S SRSP P R  SR
Subjt:  AKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR

AT1G55310.2 SC35-like splicing factor 339.2e-3452.35Show/hide
Query:  RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAE
        R RSY+P     +PPRG  R    P  R R     RD     P+ LLVRNL  D R EDLR  FE+FGPVKD+YLP++YYTG+PRGFGFV+F    DAA+
Subjt:  RSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAE

Query:  AKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AK  ++  ++ GRE+ +VFAEENRK P EMR   R  GR   RRR+P      RY+S SRSP P R  SR
Subjt:  AKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR

AT3G13570.1 SC35-like splicing factor 30A1.9e-3453.89Show/hide
Query:  RSRSYSPRRRSRTPPR--GRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDA
        R RSY+P     +PPR  GR+     PR R+  SR      S  P+ LLVRNL  D R EDLR PFE+FGPVKD+YLP++YYTG+PRGFGF++F    DA
Subjt:  RSRSYSPRRRSRTPPR--GRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDA

Query:  AEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPAR
        AEAK Q++  ++ GRE+ +VFAEENRK P EMR   R  GRS+R +   RSP R    YSRSP P R
Subjt:  AEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPAR

AT3G55460.1 SC35-like splicing factor 305.6e-3148.37Show/hide
Query:  YSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQ
        YSP RR     RGR      PR  Y        RR  +   LLVRN+PLD RPE+LR PFERFGPV+DVY+P++YY+G+PRGF FV+F  A DA EA++ 
Subjt:  YSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQ

Query:  LNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR---SSRRRSPARSPRRRYHSYSRSPSPAR-HDSRLDLICHTYSATSKTK
        +N     GREI +V A E+RK P+EMRV +R+  R    SR RS  RS   R  S SRS SP R  DSR      +YS   + +
Subjt:  LNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR---SSRRRSPARSPRRRYHSYSRSPSPAR-HDSRLDLICHTYSATSKTK

AT5G18810.1 SC35-like splicing factor 283.7e-5970.45Show/hide
Query:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF
        MA+ RSRSRSYSPR R R+PPR RK YDD   +R RE  S RD  S  PSGLL+RNLPLDARP DLR  FERFGP+KD+YLP+NYYTGEPRGFGFVK+R+
Subjt:  MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRF

Query:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR
        AEDAAEA +++NH VIGGREI IVFAEENRKTPQEMR T+ +SGR    +R+  RSPRRRY S+SRS SP R +SR
Subjt:  AEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGR-SSRRRSPARSPRRRYHSYSRSPSPARHDSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTACCGAAGCCGGAGTAGAAGTTACAGCCCTCGTCGGCGTAGCCGAACCCCACCACGAGGGCGGAAGCGGTACGACGACGACCCTAGAGACCGGTACCGCGA
AAGCAGGTCTCATAGGGACCGTCGCTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTCCCCCTTGATGCTAGGCCGGAAGATCTTAGGATCCCGTTCGAGCGTTTTG
GTCCTGTTAAGGATGTGTATCTTCCGAAAAACTACTACACTGGGGAGCCCCGAGGGTTTGGGTTTGTGAAGTTTCGGTTTGCAGAAGATGCAGCTGAAGCAAAACAACAA
CTGAATCATACAGTTATAGGTGGACGGGAGATACGAATTGTGTTTGCTGAGGAGAACAGGAAAACTCCACAAGAAATGCGTGTGACTTCACGCTCAAGTGGCAGAAGCAG
CAGAAGGCGTTCTCCAGCAAGGTCTCCGCGACGGCGATATCATTCTTACTCACGCTCACCTTCACCTGCCAGGCATGACTCAAGGTTGGATCTTATCTGTCATACTTATT
CTGCTACTAGCAAGACTAAAATCATTATTGTCCTGCTGTTTCCGTTACTCCTTACTTCTATACCGTGTTTTGAAATATTGGAGATCGTGTACAATCTACTTAATTCCTTG
TTTATGCAGATATTAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TCCCACGTCTCACCGGACCATAGGTGGACGTTTAAGTCTTTGAAGCGTAGGGTTTAGGTTATGATTTATCGATAGCGCTCTCATCTCCCTCTCCCCTTCCCAAACATTCG
AATCATTTTCCCAAATCTCCCTAGGGTTAGGGTTTTCTCTGTTTCTTTCGCGTGATTTTCGTTTGCAGGTACTCGAGGAGACGCAAACAATCCACTATGGCGAAGTACCG
AAGCCGGAGTAGAAGTTACAGCCCTCGTCGGCGTAGCCGAACCCCACCACGAGGGCGGAAGCGGTACGACGACGACCCTAGAGACCGGTACCGCGAAAGCAGGTCTCATA
GGGACCGTCGCTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTCCCCCTTGATGCTAGGCCGGAAGATCTTAGGATCCCGTTCGAGCGTTTTGGTCCTGTTAAGGAT
GTGTATCTTCCGAAAAACTACTACACTGGGGAGCCCCGAGGGTTTGGGTTTGTGAAGTTTCGGTTTGCAGAAGATGCAGCTGAAGCAAAACAACAACTGAATCATACAGT
TATAGGTGGACGGGAGATACGAATTGTGTTTGCTGAGGAGAACAGGAAAACTCCACAAGAAATGCGTGTGACTTCACGCTCAAGTGGCAGAAGCAGCAGAAGGCGTTCTC
CAGCAAGGTCTCCGCGACGGCGATATCATTCTTACTCACGCTCACCTTCACCTGCCAGGCATGACTCAAGGTTGGATCTTATCTGTCATACTTATTCTGCTACTAGCAAG
ACTAAAATCATTATTGTCCTGCTGTTTCCGTTACTCCTTACTTCTATACCGTGTTTTGAAATATTGGAGATCGTGTACAATCTACTTAATTCCTTGTTTATGCAGATATT
AAAGTGAGCCGTGGGGCCAGGGATGAGTATCTCTCTCCTGCACGATCTAGATCAATTTCACGTTCTCATTCCCCTCGTGATAGAAGGGATTATAGCCGATCTCCAACTCC
AAAGGAGAATGGTCGGAGCCCTCGTGCAGTGGACACTGCACGCAGTAGGTCAAGGAGTCCAAGGGCTGCTAGCCGCAGTCCATCTGGTTCTCGTTCACGTTCCTATAGTC
CTCGCTGATGGATGTGTTTCGGGATCATCCTCGAGATTTGTTAGTCTGCCTTCCGTTATGGCCAGATGAACTTTGCTATTCCATGCTATGCAGCTTCTGTAAGGAAATTT
TATTTATATGTGAAAGTTGGGAGGCGGGACTTGAGTTGTGGGTTGAAGAACAATGAGTGTAGTCTTGCTGTTTCTCAAGTAGTTAACTTCATGTGAGTGCATGCTCTGGT
GGACTTCTACTTGACAACCTTTCCTAGATTTAGATTTTTGGGGTTCAGTGGATTTCGTTTATACTCTTGTATATGTCTAGTGGTTGTATTTGTTAAGTTTAGGATGCTCA
AATCTTGTTATGGATATTGTCTCGTTTGTTTACCCCAGTTTTGTGTTATTGTTCAGTAATACCATTTTATATCTGTTCTTAAACCTTTTTTGAAATTTCCAAATTTTATT
ATTAAAACTAGAAACAAA
Protein sequenceShow/hide protein sequence
MAKYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQ
LNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSRLDLICHTYSATSKTKIIIVLLFPLLLTSIPCFEILEIVYNLLNSL
FMQILK