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CmoCh14G017450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G017450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr14:13588104..13588847
RNA-Seq ExpressionCmoCh14G017450
SyntenyCmoCh14G017450
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5587814.1 hypothetical protein H5410_048248 [Solanum commersonii]4.3e-2285.48Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ
        MGWLQS FSPLKKLWFRLHS+ KKRRGIYILYEDVKSCPCEDV VLWSILVESH  S PP++
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ

KAG6597448.1 hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2291.23Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSF
        MGWLQS FSPLKKLWFRLHSS +KRRGIYILYEDVKSCPCEDVHVLWSILVESHT +
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSF

KGN56989.1 hypothetical protein Csa_010650 [Cucumis sativus]1.1e-2593.44Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPPKQ
        MGWLQS FSPLKKLWFRLHSS KKRRGIYILYEDVKSCPCEDVHVLWSILVESHT  PPKQ
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPPKQ

RXH80416.1 hypothetical protein DVH24_041563 [Malus domestica]1.3e-2184.75Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPP
        MGWL S FSPLKK+WFRLHS  KKRRGIYILYEDVKSCPCEDVHVLWSILVE+HT   P
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPP

XP_007157137.1 hypothetical protein PHAVU_002G045900g [Phaseolus vulgaris]7.4e-2283.61Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPPKQ
        MGWLQS  SPLKKLWFR+HS+ KKRRGIYILYEDVKSCP EDVHVLWSILVESH+S+P K+
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPPKQ

TrEMBL top hitse value%identityAlignment
A0A0A0L7K5 Uncharacterized protein5.3e-2693.44Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPPKQ
        MGWLQS FSPLKKLWFRLHSS KKRRGIYILYEDVKSCPCEDVHVLWSILVESHT  PPKQ
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPPKQ

A0A0V0GKY9 Putative ovule protein2.1e-2285.48Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ
        MGWLQS FSPLKKLWFRLHS+ KKRRGIYILYEDVKSCPCEDV VLWSILVESH  S PP++
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ

A0A3Q7I6A2 Uncharacterized protein2.1e-2285.48Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ
        MGWLQS FSPLKKLWFRLHS+ KKRRGIYILYEDVKSCPCEDV VLWSILVESH  S PP++
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ

A0A6N2ATN6 Uncharacterized protein2.1e-2285.48Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ
        MGWLQS FSPLKKLWFRLHS+ KKRRGIYILYEDVKSCPCEDV VLWSILVESH  S PP++
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ

M1CYA3 Uncharacterized protein2.1e-2285.48Show/hide
Query:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ
        MGWLQS FSPLKKLWFRLHS+ KKRRGIYILYEDVKSCPCEDV VLWSILVESH  S PP++
Subjt:  MGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-SFPPKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACAAAATCCCTCTTTCTTGTCTAAGCTAAAAGAAAAGAAAAGAAAAGAAAACCAAAAACAAATTCATACCTTTGCTCTTTCTCTTACCCTCTGCCATGAGCTGAA
AGGAATGGGGTGGCTCCAATCCTTCTTCTCCCCATTGAAGAAGCTCTGGTTTCGACTCCATTCTTCGTCGAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTCA
AATCATGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTTCATTTCCACCAAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACAAAATCCCTCTTTCTTGTCTAAGCTAAAAGAAAAGAAAAGAAAAGAAAACCAAAAACAAATTCATACCTTTGCTCTTTCTCTTACCCTCTGCCATGAGCTGAA
AGGAATGGGGTGGCTCCAATCCTTCTTCTCCCCATTGAAGAAGCTCTGGTTTCGACTCCATTCTTCGTCGAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTCA
AATCATGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTTCATTTCCACCAAAGCAATGAAGCTTTCAACCTCCTAAACACAGTTTCCCC
AGCAATGTACATAAAATATTTATAATGCTTTACATACTGAAGGGGGGGAAAATGAATGCCCAGAAATAAAAGTTTACCTTCACCATTTTCACCATTTTTCTCTCTTCTGT
CTAATTTTTTGTGTAGCTTCTTACAGTAGTTGCTTTGTCCATTTCAGCAGTTGTGGTGGCAG
Protein sequenceShow/hide protein sequence
MPQNPSFLSKLKEKKRKENQKQIHTFALSLTLCHELKGMGWLQSFFSPLKKLWFRLHSSSKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTSFPPKQ