CuGenDBv2

Gene ID	CmoCh14G017770
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	40S ribosomal protein S3a
Genome location	Cmo_Chr14:13711640..13713731
RNA-Seq Expression	CmoCh14G017770
Synteny	CmoCh14G017770
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005829 - cytosol (cellular component) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008438626.1 PREDICTED: 40S ribosomal protein S3a [Cucumis melo]

9.1e-126

75.22

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADEAA E ATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

XP_022956208.1 40S ribosomal protein S3a-like [Cucurbita moschata]

5.7e-128

76.72

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADEAAAEEATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

XP_022979234.1 40S ribosomal protein S3a-like [Cucurbita maxima]

1.3e-127

76.42

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADEAAAEEATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

XP_023527182.1 40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo]

2.8e-127

76.12

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADEAAAEEATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

XP_038875051.1 40S ribosomal protein S3a [Benincasa hispida]

5.4e-126

74.93

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFE+SLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIM+NQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADEAA E ATE+VGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4P6 40S ribosomal protein S3a

1.3e-125

74.93

Show/hide

Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADE A E ATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

A0A1S3AXI4 40S ribosomal protein S3a

4.4e-126

75.22

Show/hide

Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADEAA E ATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

A0A5D3CZ21 40S ribosomal protein S3a

1.3e-125

74.93

Show/hide

Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADE A E ATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

A0A6J1GW62 40S ribosomal protein S3a

2.8e-128

76.72

Show/hide

Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADEAAAEEATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

A0A6J1IW45 40S ribosomal protein S3a

6.2e-128

76.42

Show/hide

Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVKVERPADEAAAEEATEVVGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

2.6e-115

67.76

Show/hide

Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNFWGM+FTTDKLRSLVRKW TLIEAHVDVKTTD+YTLR+FCI FTK+R NQ K+TC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIM N A+SCDLKELV+KFIPESIG+EIEKATSSIYPLQNV+IRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVG K+ERPADE  AE  TEV+GA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

P33444 40S ribosomal protein S3a

2.2e-114

67.26

Show/hide

Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGL+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNFWGM+FTTDKLRSLVRKW +LIEAHVDVKTTDSYTLRMFCIGFTK+R NQ KRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSE-DVGVKVERPADEAAAEEATEVVGA
            VHGDY+E D+G K++RPA+EA A E TEV+GA
Subjt:  KNSIVHGDYSE-DVGVKVERPADEAAAEEATEVVGA

P49198 40S ribosomal protein S3a

1.7e-114

67.16

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNFWGM+ TTDKLRSLV+KW +LIEAHVDVKTTD++TLRMFCIGFTK+R NQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVK++RPA+E AA EATEV+GA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

Q285L8 40S ribosomal protein S3a

4.9e-114

67.16

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKA DP+AKKDWYDIKAPSVF +KNVGKTLVTRTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEAHVDVKTTDSYTLRMFCI FTK+RPNQ KRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKM EIM NQASSCDLKELV KFIPESIG+EIEKATSSI+PLQNV+IRKVKILKAPKFD+GKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVGVK++RPADE  AE   E+ GA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

Q8GTE3 40S ribosomal protein S3a

4.0e-116

68.66

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF+GM+FTTDKLRSLVRKW TLIEAHVDVKTTD+YTLRMFCIGFTKRR NQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILK+PKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA
            VHGDYSEDVG KVE PADE   E   E+VGA
Subjt:  KNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

1.1e-113

66.07

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKG+KGGKKKA DPF+KKDWYD+KAPS+FT +NVGKTLV+RTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  FWGM+FTTDKLRSLV+KW TLIEAHVDVKTTDSYTLR+FCI FTKRR NQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKMR+IMV +ASSCDLK+LV KFIPE+IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLM+                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDYS-EDVGVKVERPADEAAAEEATEVVGA
            VHGDYS EDVGVKV+RPADE A EE TE++GA
Subjt:  KNSIVHGDYS-EDVGVKVERPADEAAAEEATEVVGA

AT4G34670.1 Ribosomal protein S3Ae

5.5e-113

66.07

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Query:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV
        + KNKRISKG+KGGKKKA DPF+KKDWYD+KAP  FT +NVGKTLV+RTQGTK                                               
Subjt:  ISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIILALRPLFCCRDLYVLVGLISYNV

Query:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC
         IASEGLKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT FWGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTC
Subjt:  NIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTC

Query:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG
        YAQSSQIRQIRRKM EIMV +ASSCDLKELV KFIPE+IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLME                        
Subjt:  YAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVLEG

Query:  KNSIVHGDY-SEDVGVKVERPADEAAAEEATEVVGA
            VHGDY +EDVGVKV+RPADE   EE TE++GA
Subjt:  KNSIVHGDY-SEDVGVKVERPADEAAAEEATEVVGA

Sequences

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CDS sequence

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ATGGCCGTCGGGTACTATCTCTCATTCTCTCATTCCGATTGTTTTCGATTTTATGCTGCATTTTGGTTTTTATCTCTGACACTCGATTTCTGTTGGATCAGCAAGAACAA
GCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCTCCTTCAGTTTTCACTGTTAAGAATGTTG
GAAAGACTCTTGTTACGCGCACGCAGGGTACCAAGATGACTTGCAATACTAATTGCAAGTTTGTTTGCATTGGATACGATAGTTTTCTCAAGTCATATTATATCATTTTA
GCTTTAAGACCCCTGTTTTGCTGCCGTGATTTGTATGTTCTTGTAGGTCTTATTTCATACAATGTGAATATTGCATCTGAAGGACTCAAACATAGAGTCTTCGAGGTCTC
GTTGGCTGATCTTCAGGATGATGAGGAGCATGCTTACAGGAAGATTCGATTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTGACAAATTTCTGGGGAATGAACTTCA
CTACTGACAAATTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCACGTGGATGTCAAAACCACAGACAGCTACACCCTTAGAATGTTTTGCATTGGATTC
ACTAAGAGAAGGCCAAACCAGGTGAAAAGAACCTGTTATGCGCAATCCAGCCAGATCAGGCAGATCCGCCGGAAGATGAGAGAGATCATGGTAAACCAGGCGTCCTCTTG
TGATTTGAAGGAATTGGTTCGCAAGTTCATTCCAGAGTCAATTGGCAAGGAGATCGAAAAGGCAACATCAAGTATCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTTA
AAATTTTGAAAGCTCCCAAATTCGATCTTGGGAAGTTAATGGAGGTATATATCTGGTTTATTTCTGGAAGTATTTCAGAGTTTTATGTTTCCTCCGTGATATTTGTATTA
GAAGGGAAAAATTCTATTGTTCACGGCGACTACTCAGAAGACGTTGGCGTGAAGGTTGAGAGACCGGCCGACGAAGCGGCGGCAGAGGAGGCTACTGAAGTTGTTGGAGC
TTGA

mRNA sequence

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Protein sequence

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MAVGYYLSFSHSDCFRFYAAFWFLSLTLDFCWISKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKMTCNTNCKFVCIGYDSFLKSYYIIL
ALRPLFCCRDLYVLVGLISYNVNIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGF
TKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVYIWFISGSISEFYVSSVIFVL
EGKNSIVHGDYSEDVGVKVERPADEAAAEEATEVVGA

CmoCh14G017770 (gene) of Cucurbita moschata (Rifu) v1 genome