; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G018140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G018140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationCmo_Chr14:13852296..13854113
RNA-Seq ExpressionCmoCh14G018140
SyntenyCmoCh14G018140
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582352.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.0e-10599.49Show/hide
Query:  IWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRH
        IWEMF EVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRH
Subjt:  IWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRH

Query:  IFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        IFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
Subjt:  IFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

KAG7018763.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-10697.99Show/hide
Query:  WPQFIWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHG
        W   IWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITF CRTFLPLEGEILHG
Subjt:  WPQFIWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHG

Query:  VVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        VVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
Subjt:  VVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

XP_022924760.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita moschata]3.4e-104100Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

XP_022980115.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita maxima]2.1e-10197.92Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MFCEVELVR+VEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK EVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCI KEFVMLASLEGNTSLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

XP_038877103.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]2.1e-9386.21Show/hide
Query:  PITTWPQFIWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGE
        P   +P  IWEMF EVELV+DVE+T EKEKRD +N QRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGKG V   S+SQCVSFPITFSCRTFLP EGE
Subjt:  PITTWPQFIWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGE

Query:  ILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        ILHGVV HIFRRGLLLKCGPIKYVFLSA KMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDE
Subjt:  ILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

Query:  FDL
        FDL
Subjt:  FDL

TrEMBL top hitse value%identityAlignment
A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like8.0e-9189.06Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFL+VTSLKSIGKG VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKY FLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like8.0e-9189.06Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFL+VTSLKSIGKG VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKY FLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

A0A6J1D1U6 DNA-directed RNA polymerase V subunit 7-like1.2e-9187.05Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGV-NLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIF
        MFCEVEL RDVEV  E EKRDG  N  RYIITCLLENLLKEKAS+DHGYFLAVT+LKSIGKGEVKNES+SQC+SFP+TFSCRTFLP EGEILHGVVRHIF
Subjt:  MFCEVELVRDVEVTVEKEKRDGV-NLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIF

Query:  RRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RRGLLL+CGPIKYVFLSARKMPTY YVGG+NP+FSS + ATI NDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPISSS+SDEFDL
Subjt:  RRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like1.7e-104100Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X11.0e-10197.92Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MFCEVELVR+VEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK EVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCI KEFVMLASLEGNTSLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 74.6e-3541.53Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF +V+L  +V +  E     G+ L+R I+  LLE    +KA+K+ GY++AVT+L  IG+G+++  +    V FP+ FS  TF   +GEI+HGVV  + +
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPIS
         G+ ++CGPI+ V+LS  KMP Y Y+ GENP+F + +++ I  +  VR  V+G++W+E    +++EF  LASLEG+  LGP+S
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPIS

P46279 DNA-directed RNA polymerase II subunit RPB75.4e-1228.66Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF  + L R++++     +  G NL+  +++ L+++ ++   S  HG+ +AVT +++IGKG +++   +  V+FP+ + C  F P +GEIL  VV  + +
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSTQ-SATIGNDVVVRFSVLGVR
         G   + GP++ +F+S   +P    +  G+ P ++++  S  I  D  VR  ++G R
Subjt:  RGLLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSTQ-SATIGNDVVVRFSVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein8.3e-3740.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV
        MF EVE+ RDV +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

Q8LE42 DNA-directed RNA polymerase IV subunit 72.2e-2940.33Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF +V+L  DV +  E +   G+ LQR I+  LLE   KEKA+KD GY +  T L++IG+G++K ++    + FP+ F+   F   +GEI+HGVV  + +
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGP
         G+ LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+ +LGP
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain1.6e-3040.33Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF +V+L  DV +  E +   G+ LQR I+  LLE   KEKA+KD GY +  T L++IG+G++K ++    + FP+ F+   F   +GEI+HGVV  + +
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGP
         G+ LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+ +LGP
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGP

AT4G14520.1 DNA-directed RNA polymerase II-related5.9e-3840.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV
        MF EVE+ RDV +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

AT4G14520.2 DNA-directed RNA polymerase II-related5.9e-3840.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV
        MF EVE+ RDV +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

AT4G14520.3 DNA-directed RNA polymerase II-related5.9e-3840.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV
        MF EVE+ RDV +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain3.3e-3641.53Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF +V+L  +V +  E     G+ L+R I+  LLE    +KA+K+ GY++AVT+L  IG+G+++  +    V FP+ FS  TF   +GEI+HGVV  + +
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPIS
         G+ ++CGPI+ V+LS  KMP Y Y+ GENP+F + +++ I  +  VR  V+G++W+E    +++EF  LASLEG+  LGP+S
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACCATCAGCCCTCACTTATCCACTGCAATGCTTTTCACCAATCACAACATGGCCACAGTTCATCTGGGAAATGTTTTGTGAAGTGGAACTAGTGAGAGATGT
GGAAGTCACGGTGGAAAAGGAAAAGAGAGATGGTGTCAACTTGCAGAGGTACATTATAACATGTCTATTAGAAAACCTCTTGAAGGAGAAGGCCAGCAAAGACCATGGCT
ATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGGAAGGGAGAGGTCAAGAATGAGTCTGAGTCACAATGTGTTTCATTCCCCATTACCTTTAGTTGCCGAACCTTTTTG
CCTTTGGAGGGAGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTACGTGTTTCTTTCAGCTCGTAAAATGCC
AACCTACCATTATGTTGGAGGTGAAAATCCTGTCTTCTCGAGCACCCAATCTGCAACGATTGGAAATGATGTCGTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGTTAG
AGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACACCTCACTTGGACCCATTTCATCGTCCGACTCCGACGAGTTTGACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACCATCAGCCCTCACTTATCCACTGCAATGCTTTTCACCAATCACAACATGGCCACAGTTCATCTGGGAAATGTTTTGTGAAGTGGAACTAGTGAGAGATGT
GGAAGTCACGGTGGAAAAGGAAAAGAGAGATGGTGTCAACTTGCAGAGGTACATTATAACATGTCTATTAGAAAACCTCTTGAAGGAGAAGGCCAGCAAAGACCATGGCT
ATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGGAAGGGAGAGGTCAAGAATGAGTCTGAGTCACAATGTGTTTCATTCCCCATTACCTTTAGTTGCCGAACCTTTTTG
CCTTTGGAGGGAGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTACGTGTTTCTTTCAGCTCGTAAAATGCC
AACCTACCATTATGTTGGAGGTGAAAATCCTGTCTTCTCGAGCACCCAATCTGCAACGATTGGAAATGATGTCGTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGTTAG
AGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACACCTCACTTGGACCCATTTCATCGTCCGACTCCGACGAGTTTGACTTGTAA
Protein sequenceShow/hide protein sequence
MAKPSALTYPLQCFSPITTWPQFIWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFSCRTFL
PLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL