; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G018190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G018190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAlba domain-containing protein
Genome locationCmo_Chr14:13887842..13888863
RNA-Seq ExpressionCmoCh14G018190
SyntenyCmoCh14G018190
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582358.1 hypothetical protein SDJN03_22360, partial [Cucurbita argyrosperma subsp. sororia]1.2e-8993.85Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        MESGMVVSEAISE+KNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVK+PFFYYYNLSK         RYIKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTKFLQEIGDLVANRRVNGRAFGRSRFNPNRTEGEESIVKDWM
        AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTKFLQEIGDLVANRRVNG AFGRSRFNPNRTEGEESIVKDWM
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTKFLQEIGDLVANRRVNGRAFGRSRFNPNRTEGEESIVKDWM

KAG7018769.1 hypothetical protein SDJN02_20642 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6391.67Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGM--AIPTVV
        MESGMVVSEAISE+KNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSK         RYIKQYNEVELSALGM   IPTVV
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGM--AIPTVV

Query:  TIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        TIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
Subjt:  TIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

XP_022924600.1 uncharacterized protein At2g34160-like [Cucurbita moschata]5.6e-6694.16Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSK         RYIKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

XP_022980835.1 uncharacterized protein At2g34160-like [Cucurbita maxima]5.3e-6492.21Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        MESGMVVSEA SE+KNEIRNEEEKLLVVAPD EVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSK         RYIKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

XP_038877187.1 uncharacterized protein At2g34160-like [Benincasa hispida]4.8e-5783.77Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        MESGMVVSE   E+KNEIR+EEEKLLVVA DGEVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSK         R+IKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        AEILK+NGLAFQK LTISSVSLK GEND+LVMKPKIEIAL+NAEK+K ISTA T
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

TrEMBL top hitse value%identityAlignment
A0A0A0L8F8 Alba domain-containing protein8.8e-5782.47Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        M+SGMVVSEA  E+KNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSK         R+IKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        AEILK+NGLAFQK L ISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA T
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

A0A1S3AXD3 uncharacterized protein At2g34160-like1.2e-5682.47Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        M+SG VVSEA  E+KNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSK         R+IKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        AEILK+NGLAFQK LTISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA T
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

A0A5D3CZ81 Alba DNA/RNA-binding protein1.2e-5682.47Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        M+SG VVSEA  E+KNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSK         R+IKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        AEILK+NGLAFQK LTISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA T
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

A0A6J1EFH1 uncharacterized protein At2g34160-like2.7e-6694.16Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSK         RYIKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

A0A6J1IXN8 uncharacterized protein At2g34160-like2.6e-6492.21Show/hide
Query:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI
        MESGMVVSEA SE+KNEIRNEEEKLLVVAPD EVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSK         RYIKQYNEVELSALGMAIPTVVTI
Subjt:  MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTI

Query:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
Subjt:  AEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341608.9e-2247.54Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAE
        +K+N+IQVSN KKP F+Y NL+K         RY++QYN+VELSALGMAI TVVT+ EILK NG A +K +  S+V +K+    R V K KIEI L+ +E
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAE

Query:  KMKKISTATTKFLQEIGDLVAN
        K  ++  A  +  ++    V N
Subjt:  KMKKISTATTKFLQEIGDLVAN

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein5.3e-2250.45Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAE
        +K+N+IQVSN KKP F+Y NL+K         RY++QY +VELSALGMAI TVVT+AEILK NG A +K +  S+V +K+    R V K KIEI L  +E
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAE

Query:  KMKKISTATTK
        K  ++  A  +
Subjt:  KMKKISTATTK

AT2G34160.1 Alba DNA/RNA-binding protein6.3e-2347.54Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAE
        +K+N+IQVSN KKP F+Y NL+K         RY++QYN+VELSALGMAI TVVT+ EILK NG A +K +  S+V +K+    R V K KIEI L+ +E
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAE

Query:  KMKKISTATTKFLQEIGDLVAN
        K  ++  A  +  ++    V N
Subjt:  KMKKISTATTKFLQEIGDLVAN

AT3G04620.1 Alba DNA/RNA-binding protein5.3e-2247.73Show/hide
Query:  EKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSL
        E+ +V+AP        V T    K+N+IQVSN KKP F+Y NL+K         RYI+Q+NEVELSALGMAI TVVTI+EILK NGLA +K +  S+V +
Subjt:  EKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSL

Query:  KNGENDRLVMKPKIEIALINAEKMKKISTATT
        K+    ++V K KIEI L  ++K   +    T
Subjt:  KNGENDRLVMKPKIEIALINAEKMKKISTATT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCGGCATGGTCGTCTCAGAAGCCATCTCTGAGCTCAAGAATGAAATCCGTAATGAGGAGGAAAAGCTCCTGGTCGTTGCTCCAGATGGTGAGGTTAAGGAGAT
CGCTGTTTTGACCGAGATCAAGAAGAAGAGGAACCAAATCCAGGTTTCCAATGTCAAGAAGCCGTTCTTCTACTACTACAATCTTTCTAAGGTATTCATTTCTTGCTTCC
TCAAGATCAGGTACATTAAGCAGTACAACGAAGTTGAGCTCTCTGCCCTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTAGCA
TTTCAAAAGTATTTGACGATATCTTCTGTAAGCTTGAAGAATGGGGAAAATGATAGGCTGGTTATGAAACCTAAGATTGAGATTGCCCTGATAAATGCAGAAAAGATGAA
GAAAATTTCGACTGCTACAACAAAGTTTCTACAGGAGATTGGAGATTTGGTAGCGAATAGGCGAGTGAATGGCAGAGCTTTTGGTCGAAGTAGATTCAATCCTAACAGAA
CTGAAGGAGAAGAGTCCATTGTTAAAGATTGGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCGGCATGGTCGTCTCAGAAGCCATCTCTGAGCTCAAGAATGAAATCCGTAATGAGGAGGAAAAGCTCCTGGTCGTTGCTCCAGATGGTGAGGTTAAGGAGAT
CGCTGTTTTGACCGAGATCAAGAAGAAGAGGAACCAAATCCAGGTTTCCAATGTCAAGAAGCCGTTCTTCTACTACTACAATCTTTCTAAGGTATTCATTTCTTGCTTCC
TCAAGATCAGGTACATTAAGCAGTACAACGAAGTTGAGCTCTCTGCCCTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTAGCA
TTTCAAAAGTATTTGACGATATCTTCTGTAAGCTTGAAGAATGGGGAAAATGATAGGCTGGTTATGAAACCTAAGATTGAGATTGCCCTGATAAATGCAGAAAAGATGAA
GAAAATTTCGACTGCTACAACAAAGTTTCTACAGGAGATTGGAGATTTGGTAGCGAATAGGCGAGTGAATGGCAGAGCTTTTGGTCGAAGTAGATTCAATCCTAACAGAA
CTGAAGGAGAAGAGTCCATTGTTAAAGATTGGATGTAG
Protein sequenceShow/hide protein sequence
MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKVFISCFLKIRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLA
FQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTKFLQEIGDLVANRRVNGRAFGRSRFNPNRTEGEESIVKDWM