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CmoCh14G018230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G018230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr14:13895177..13896257
RNA-Seq ExpressionCmoCh14G018230
SyntenyCmoCh14G018230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]1.5e-2479.73Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR  +EL LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    STRRPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

KAG6582361.1 hypothetical protein SDJN03_22363, partial [Cucurbita argyrosperma subsp. sororia]5.9e-2997.06Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHST
        LHPNIAGRTLHENPSMVRRT  ELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHST
Subjt:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHST

KAG7018772.1 hypothetical protein SDJN02_20645, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4090.32Show/hide
Query:  MDGIWLPCLDLVGTVHCNNLHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        MDGIWLPCLDL        LHPNIAGRTLHENPSMVRRTEL+LKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
Subjt:  MDGIWLPCLDLVGTVHCNNLHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]1.0e-2581.08Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR  +EL LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY  NHST+RPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]1.5e-2479.73Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR  +EL LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    STRRPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein5.0e-2681.08Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR  +EL LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY  NHST+RPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

A0A5A7U6N3 Putative transmembrane protein7.2e-2579.73Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR  +EL LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    STRRPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

A0A5D3CZY7 Putative transmembrane protein7.2e-2579.73Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR  +EL LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    STRRPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

A0A5N6R1J5 Uncharacterized protein4.0e-0764.44Show/hide
Query:  RRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHY
        R    E  ++LQSLQR +VPPSG SGCT+IPGT GPGCP K  HY
Subjt:  RRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHY

A0A7N2LY56 Uncharacterized protein8.0e-0853.33Show/hide
Query:  AGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTIN
        A R L++   ++R+     ++ LQSLQR  V PSGPSGCT+IPGTNGPGCP    HY  N
Subjt:  AGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAATTTGGCTTCCCTGCCTAGACTTGGTGGGTACTGTCCACTGTAATAACCTTCACCCAAACATAGCTGGTAGAACTCTGCATGAGAACCCATCAATGGTGAG
AAGAACGGAGCTGGAGCTGAAGCTGAAGCTGCAGTCTCTTCAAAGGGTCAGTGTACCGCCCTCCGGCCCCTCCGGTTGCACCTTCATTCCCGGCACCAACGGCCCCGGCT
GTCCCCAGAAAGTGAGGCACTACACCATCAACCATTCGACTCGACGTCCAAGCGCTCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAATTTGGCTTCCCTGCCTAGACTTGGTGGGTACTGTCCACTGTAATAACCTTCACCCAAACATAGCTGGTAGAACTCTGCATGAGAACCCATCAATGGTGAG
AAGAACGGAGCTGGAGCTGAAGCTGAAGCTGCAGTCTCTTCAAAGGGTCAGTGTACCGCCCTCCGGCCCCTCCGGTTGCACCTTCATTCCCGGCACCAACGGCCCCGGCT
GTCCCCAGAAAGTGAGGCACTACACCATCAACCATTCGACTCGACGTCCAAGCGCTCACTGA
Protein sequenceShow/hide protein sequence
MDGIWLPCLDLVGTVHCNNLHPNIAGRTLHENPSMVRRTELELKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH