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CmoCh14G018270 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G018270
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionC2H2-type domain-containing protein
Genome locationCmo_Chr14:13912429..13913346
RNA-Seq ExpressionCmoCh14G018270
SyntenyCmoCh14G018270
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582365.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. sororia]4.8e-7992.77Show/hide
Query:  MNTTISGGGAPAAA------GGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHF
        MNTTISGGGAPAAA      GGGGGG  N A KSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHF
Subjt:  MNTTISGGGAPAAA------GGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHF

Query:  TNLNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF
        TNLNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATL+TESKKKDIDLELRLG+
Subjt:  TNLNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF

KAG7018776.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-7991.67Show/hide
Query:  MNTTISGGGAPAAA--------GGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHT
        MNTTISGGGAPAAA        GGGGGG  N A KSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHT
Subjt:  MNTTISGGGAPAAA--------GGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHT

Query:  HFTNLNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF
        HFTNLNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATL+TESKKKDIDLELRLG+
Subjt:  HFTNLNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF

XP_022924639.1 zinc finger protein 11-like [Cucurbita moschata]7.6e-8599.38Show/hide
Query:  MNTTISGGGAPAAAGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLN
        MNTTISGGGAPAAAGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLN
Subjt:  MNTTISGGGAPAAAGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLN

Query:  LHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF
        LHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLG+
Subjt:  LHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF

XP_022979614.1 transcriptional regulator SUPERMAN-like [Cucurbita maxima]9.6e-7288.41Show/hide
Query:  MNTTISGGGAPAAA----GGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
        MNTTISGG A AAA    GGGGGG  N A KSQRNK CRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
Subjt:  MNTTISGGGAPAAA----GGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN

Query:  LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF
        LNLNL+HNPFPNRP KALEIAKPNRNK HKFIGLDIEI+TT NTATL+TES KKDIDLELRLG+
Subjt:  LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF

XP_023526745.1 zinc finger protein 11-like [Cucurbita pepo subsp. pepo]2.8e-7992.68Show/hide
Query:  MNTTISGGGAPAA----AGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
        MNTTIS GG  AA     GGGGGGGPNG GKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
Subjt:  MNTTISGGGAPAA----AGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN

Query:  LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF
        LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEI+TTNNTATL+TESKKKDIDLELRLG+
Subjt:  LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF

TrEMBL top hitse value%identityAlignment
A0A0A0L9Y8 C2H2-type domain-containing protein2.5e-4164.88Show/hide
Query:  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHNPFPN----------
        GGG N + KSQRNKVCR  AA EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNLNLNL HNP PN          
Subjt:  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHNPFPN----------

Query:  -RPFKALEIA--------KPNR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF
         R    L+++        KPN        K  KF IGLDIEI+TT++T  ++T+S KKDIDLELRLG+
Subjt:  -RPFKALEIA--------KPNR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF

A0A1S3AWP0 transcriptional regulator SUPERMAN-like7.3e-4162.35Show/hide
Query:  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHNPFPNRPFKALE---
        GGG N + KSQRNKVCR  AA EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNLNLNL HNP PN    + +   
Subjt:  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHNPFPNRPFKALE---

Query:  ------------------IAKPNR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF
                           AKPN        K  KF IGLDIEI+TT++T  L     K DIDLELRLG+
Subjt:  ------------------IAKPNR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF

A0A5A7U0H2 Transcriptional regulator SUPERMAN-like7.3e-4162.35Show/hide
Query:  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHNPFPNRPFKALE---
        GGG N + KSQRNKVCR  AA EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNLNLNL HNP PN    + +   
Subjt:  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHNPFPNRPFKALE---

Query:  ------------------IAKPNR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF
                           AKPN        K  KF IGLDIEI+TT++T  L     K DIDLELRLG+
Subjt:  ------------------IAKPNR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF

A0A6J1E9R8 zinc finger protein 11-like3.7e-8599.38Show/hide
Query:  MNTTISGGGAPAAAGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLN
        MNTTISGGGAPAAAGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLN
Subjt:  MNTTISGGGAPAAAGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLN

Query:  LHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF
        LHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLG+
Subjt:  LHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF

A0A6J1IX36 transcriptional regulator SUPERMAN-like4.7e-7288.41Show/hide
Query:  MNTTISGGGAPAAA----GGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
        MNTTISGG A AAA    GGGGGG  N A KSQRNK CRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
Subjt:  MNTTISGGGAPAAA----GGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN

Query:  LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF
        LNLNL+HNPFPNRP KALEIAKPNRNK HKFIGLDIEI+TT NTATL+TES KKDIDLELRLG+
Subjt:  LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.9e-1465.52Show/hide
Query:  KSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL
        KS +       A AE+D   G  WPPRSYTC+FC+REF+SAQALGGHMNVHRRDRA L
Subjt:  KSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL

Q38895 Transcriptional regulator SUPERMAN6.0e-1650.57Show/hide
Query:  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA---LLYSPPADHTHFTNLNLNLHHNPFPNRPFKALEIAKPNRNKP
        + D++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA   L  SP +  T            P PN  +  +  + P  + P
Subjt:  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA---LLYSPPADHTHFTNLNLNLHHNPFPNRPFKALEIAKPNRNKP

Q9LHS9 Probable transcriptional regulator RABBIT EARS2.8e-1372.55Show/hide
Query:  RAAAAAEE-DFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL
        RA A+AEE     G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRA L
Subjt:  RAAAAAEE-DFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL

Q9SLB8 Zinc finger protein 114.3e-1441.07Show/hide
Query:  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPA------DHTHFTNLNLNLHHNPFPNRPFKALEIAKPN---RNKPHKFIGLDIEINTTN
        I WPP++YTC+FC+REFRSAQALGGHMNVHRRDRA L   P+       HT   N N N   +   +     LE +  N   +  P      D+  +TT+
Subjt:  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPA------DHTHFTNLNLNLHHNPFPNRPFKALEIAKPN---RNKPHKFIGLDIEINTTN

Query:  NTATLITESKKK
            ++   K K
Subjt:  NTATLITESKKK

Q9SR34 Transcriptional regulator TAC13.9e-0775Show/hide
Query:  RSYTCNFCKREFRSAQALGGHMNVHRRDRALL
        RSY C+FC R F +AQALGGHMN+HRRDRA L
Subjt:  RSYTCNFCKREFRSAQALGGHMNVHRRDRALL

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 101.4e-1565.52Show/hide
Query:  KSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL
        KS +       A AE+D   G  WPPRSYTC+FC+REF+SAQALGGHMNVHRRDRA L
Subjt:  KSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL

AT2G42410.1 zinc finger protein 113.0e-1541.07Show/hide
Query:  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPA------DHTHFTNLNLNLHHNPFPNRPFKALEIAKPN---RNKPHKFIGLDIEINTTN
        I WPP++YTC+FC+REFRSAQALGGHMNVHRRDRA L   P+       HT   N N N   +   +     LE +  N   +  P      D+  +TT+
Subjt:  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPA------DHTHFTNLNLNLHHNPFPNRPFKALEIAKPN---RNKPHKFIGLDIEINTTN

Query:  NTATLITESKKK
            ++   K K
Subjt:  NTATLITESKKK

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein4.2e-1750.57Show/hide
Query:  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA---LLYSPPADHTHFTNLNLNLHHNPFPNRPFKALEIAKPNRNKP
        + D++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA   L  SP +  T            P PN  +  +  + P  + P
Subjt:  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA---LLYSPPADHTHFTNLNLNLHHNPFPNRPFKALEIAKPNRNKP

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein4.4e-1457.75Show/hide
Query:  GGGGGGGPNGAGKSQRNKVCRAAAAAEEDF---INGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA
        GG     PN   + + +       A E+D    I+G +WPPRSYTCNFC+REFRSAQALGGHMNVHRRDRA
Subjt:  GGGGGGGPNGAGKSQRNKVCRAAAAAEEDF---INGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein2.0e-1472.55Show/hide
Query:  RAAAAAEE-DFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL
        RA A+AEE     G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRA L
Subjt:  RAAAAAEE-DFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACCACCATCAGCGGCGGAGGAGCACCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGACCCAACGGGGCAGGGAAAAGCCAGAGAAACAAGGTGTGCAGGGCGGC
GGCGGCGGCAGAGGAGGATTTCATAAATGGGATTTCATGGCCACCAAGAAGTTACACGTGCAACTTCTGCAAAAGGGAATTCAGATCGGCTCAAGCACTTGGCGGCCACA
TGAATGTCCATCGTAGAGATAGAGCCTTACTCTACTCTCCCCCTGCTGATCATACCCACTTCACAAATCTCAACCTTAACCTTCACCATAACCCTTTCCCTAATCGCCCC
TTCAAAGCCTTGGAGATTGCCAAACCTAATAGGAACAAGCCCCACAAATTCATTGGTTTGGACATTGAAATCAACACTACCAATAACACTGCCACCCTAATTACTGAATC
CAAGAAGAAGGACATTGATTTGGAGCTCCGATTAGGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACCACCATCAGCGGCGGAGGAGCACCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGACCCAACGGGGCAGGGAAAAGCCAGAGAAACAAGGTGTGCAGGGCGGC
GGCGGCGGCAGAGGAGGATTTCATAAATGGGATTTCATGGCCACCAAGAAGTTACACGTGCAACTTCTGCAAAAGGGAATTCAGATCGGCTCAAGCACTTGGCGGCCACA
TGAATGTCCATCGTAGAGATAGAGCCTTACTCTACTCTCCCCCTGCTGATCATACCCACTTCACAAATCTCAACCTTAACCTTCACCATAACCCTTTCCCTAATCGCCCC
TTCAAAGCCTTGGAGATTGCCAAACCTAATAGGAACAAGCCCCACAAATTCATTGGTTTGGACATTGAAATCAACACTACCAATAACACTGCCACCCTAATTACTGAATC
CAAGAAGAAGGACATTGATTTGGAGCTCCGATTAGGATTTTGA
Protein sequenceShow/hide protein sequence
MNTTISGGGAPAAAGGGGGGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHNPFPNRP
FKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLELRLGF