; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G018290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G018290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionC2H2-type domain-containing protein
Genome locationCmo_Chr14:13915823..13916335
RNA-Seq ExpressionCmoCh14G018290
SyntenyCmoCh14G018290
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582366.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]7.5e-9195.43Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQ----HHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH-SSSSSPHSNDQLFPPLSTQ
        MDFGKQG+SDSSSDEYDPPPPQQ    HHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH SSSSSPHSNDQLFPPLSTQ
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQ----HHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH-SSSSSPHSNDQLFPPLSTQ

Query:  PNFPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        PN PYYPPPPQPPSSYRMYFDT+ATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  PNFPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

KAG7018777.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-9195.98Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQ---HHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH-SSSSSPHSNDQLFPPLSTQP
        MDFGKQG+SDSSSDEYDPPPPQQ   HHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH SSSSSPHSNDQLFPPLSTQP
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQ---HHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH-SSSSSPHSNDQLFPPLSTQP

Query:  NFPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        N PYYPPPPQPPSSYRMYFDT+ATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  NFPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

XP_022924669.1 transcriptional regulator SUPERMAN-like [Cucurbita moschata]1.7e-95100Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY
        MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY

Query:  YPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        YPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  YPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

XP_022979419.1 zinc finger protein 11-like [Cucurbita maxima]4.6e-8893.64Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHP---TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPN
        MDFGKQG+SDSSSDEYDPPPPQQHH HHHP   TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPN
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHP---TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPN

Query:  FPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
         PYYPPPPQP SSYRMYFDT+ATNFPIHPQIRSPGV NQEL GA+LSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  FPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

XP_023526746.1 transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo]2.3e-8792.61Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPP---QQHHHHHHP---TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLST
        MDFGKQGTSDSSSDEYDPPPP     HHHHHHP    DNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLST
Subjt:  MDFGKQGTSDSSSDEYDPPPP---QQHHHHHHP---TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLST

Query:  QPNFPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        QPN PY PPPPQPPSSYRMYFDT+ATNFPIHPQIRSPGV NQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  QPNFPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

TrEMBL top hitse value%identityAlignment
A0A0A0L4H6 C2H2-type domain-containing protein2.6e-4973.2Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQH-HHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPP-LSTQPNF
        MDFGKQG+ DSSSDEY+    Q H H      +NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK KHRNF HSSSS+  ++DQ FPP + TQP  
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQH-HHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPP-LSTQPNF

Query:  PYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTR
        P Y   P PP SYRMYFDT+ATNFPIHPQI SP V NQELLGA+LSL+IDQTR
Subjt:  PYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTR

A0A1S3AZA2 zinc finger protein 73.6e-6276.3Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTD--NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPP-LSTQPN
        MDFGKQG+ DSSSDEY+   PQ HH H    D  NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK KHRNF HSSSS+  ++DQ FPP + TQP 
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTD--NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPP-LSTQPN

Query:  FPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
         P Y   P PP SYRMYFDT+ATNFPIHPQI SP V NQELLGA+LSLQIDQ RGVW NEE+DLELRLGHEYR
Subjt:  FPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

A0A6J1DD81 zinc finger protein 8-like8.2e-5169.36Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY
        MDFGKQG+ DSSSDEY P    Q       TD DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK K RN   SSSS  HS+DQ+FPP+S  P   Y
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY

Query:  YPPPPQPPS--SYRMYFD-TSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        YPPPP   +  +YRMYFD T+A N+PIH + RS G  N++LLGA+L+LQIDQTRGVW+NEE+DLELRLGHEYR
Subjt:  YPPPPQPPS--SYRMYFD-TSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

A0A6J1E9V2 transcriptional regulator SUPERMAN-like8.4e-96100Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY
        MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY

Query:  YPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        YPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  YPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

A0A6J1IWL0 zinc finger protein 11-like2.2e-8893.64Show/hide
Query:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHP---TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPN
        MDFGKQG+SDSSSDEYDPPPPQQHH HHHP   TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPN
Subjt:  MDFGKQGTSDSSSDEYDPPPPQQHHHHHHP---TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPN

Query:  FPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
         PYYPPPPQP SSYRMYFDT+ATNFPIHPQIRSPGV NQEL GA+LSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  FPYYPPPPQPPSSYRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 103.2e-0737.93Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPYYPPPP--QPPSSYRMYFDTSATNF
        R Y C+FC+R F +AQALGGHMN+HR+DRA+ K  +           +  LFP  S+ P +P +         S Y + F+T    F
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPYYPPPP--QPPSSYRMYFDTSATNF

Q38895 Transcriptional regulator SUPERMAN3.9e-0540.54Show/hide
Query:  FGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY--
        +G+  TS  S  +YD    QQ H +       P  R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +  + SSSS+P        P    PN+ Y  
Subjt:  FGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPY--

Query:  ---YPPPPQPP
            PPP   P
Subjt:  ---YPPPPQPP

Q9LHS9 Probable transcriptional regulator RABBIT EARS3.7e-0855.56Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPP
        R Y C+FC R F +AQALGGHMN+HR+DRA+ K +      S SP S DQ  PP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPP

Q9SLB8 Zinc finger protein 111.2e-0645.95Show/hide
Query:  YECTFCKRGFTNAQALGGHMNIHRKDRAK----------PKHR--------NFTHSSSSSPHSNDQLFPPLSTQ
        Y C+FC+R F +AQALGGHMN+HR+DRAK          P H         NF+ SSSSS  +   L P L+ Q
Subjt:  YECTFCKRGFTNAQALGGHMNIHRKDRAK----------PKHR--------NFTHSSSSSPHSNDQLFPPLSTQ

Q9SR34 Transcriptional regulator TAC11.4e-0758.7Show/hide
Query:  HHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHR
        H    D+    R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Subjt:  HHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHR

Arabidopsis top hitse value%identityAlignment
AT3G09290.1 telomerase activator11.0e-0858.7Show/hide
Query:  HHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHR
        H    D+    R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Subjt:  HHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHR

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein4.5e-0941.75Show/hide
Query:  KRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQP----NF----PYYP----------PPPQPPSSYRMYFDTS
        +R Y+C  CKRGFTN QALGGH NIHR++R +        SSSSS HS     P  S  P    NF    PY+P           PP  PS    YF +S
Subjt:  KRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQP----NF----PYYP----------PPPQPPSSYRMYFDTS

Query:  ATN
        +++
Subjt:  ATN

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein6.3e-1169.05Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSS
        RPY C FC+RGF+NAQALGGHMNIHRKDRAK +  N     S
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSS

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein2.6e-0955.56Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPP
        R Y C+FC R F +AQALGGHMN+HR+DRA+ K +      S SP S DQ  PP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPP

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein3.5e-0950Show/hide
Query:  SSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KPKHRNFTHSSSSSPH
        SSS         +H      + +  T+R YECTFCKRGFTNAQALGGHMNIHR+DR  K K +N    + S  H
Subjt:  SSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KPKHRNFTHSSSSSPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGGAAAACAGGGGACCTCCGACAGTTCCAGCGACGAATATGACCCCCCGCCGCCACAACAACATCACCATCATCATCATCCCACCGATAATGACCCCACTAA
ACGCCCCTACGAGTGCACATTTTGTAAGCGTGGCTTCACCAATGCTCAAGCCCTCGGTGGCCACATGAACATCCACCGCAAGGACCGTGCCAAACCCAAACACCGCAACT
TCACTCATTCCTCTTCTTCTTCTCCTCATTCCAACGACCAATTATTCCCTCCCCTTTCCACCCAACCCAACTTCCCCTATTACCCCCCGCCGCCGCAGCCGCCGTCGTCT
TACCGGATGTACTTTGACACCTCCGCCACCAACTTCCCTATTCACCCCCAGATCAGATCGCCCGGTGTCGGCAATCAAGAGCTTCTCGGAGCCGATCTCAGCCTCCAAAT
TGATCAAACCAGGGGTGTCTGGGAAAATGAAGAAGTCGATTTGGAGCTTCGACTCGGGCATGAATATCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGGAAAACAGGGGACCTCCGACAGTTCCAGCGACGAATATGACCCCCCGCCGCCACAACAACATCACCATCATCATCATCCCACCGATAATGACCCCACTAA
ACGCCCCTACGAGTGCACATTTTGTAAGCGTGGCTTCACCAATGCTCAAGCCCTCGGTGGCCACATGAACATCCACCGCAAGGACCGTGCCAAACCCAAACACCGCAACT
TCACTCATTCCTCTTCTTCTTCTCCTCATTCCAACGACCAATTATTCCCTCCCCTTTCCACCCAACCCAACTTCCCCTATTACCCCCCGCCGCCGCAGCCGCCGTCGTCT
TACCGGATGTACTTTGACACCTCCGCCACCAACTTCCCTATTCACCCCCAGATCAGATCGCCCGGTGTCGGCAATCAAGAGCTTCTCGGAGCCGATCTCAGCCTCCAAAT
TGATCAAACCAGGGGTGTCTGGGAAAATGAAGAAGTCGATTTGGAGCTTCGACTCGGGCATGAATATCGCTGA
Protein sequenceShow/hide protein sequence
MDFGKQGTSDSSSDEYDPPPPQQHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSPHSNDQLFPPLSTQPNFPYYPPPPQPPSS
YRMYFDTSATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR