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CmoCh14G018370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G018370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionactin-related protein 9
Genome locationCmo_Chr14:13935319..13938854
RNA-Seq ExpressionCmoCh14G018370
SyntenyCmoCh14G018370
Gene Ontology termsGO:0006302 - double-strand break repair (biological process)
GO:0006338 - chromatin remodeling (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0031011 - Ino80 complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018781.1 Actin-related protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-6492.7Show/hide
Query:  SLDQHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREMNMGFPRNPSTSDTSGYKLFLISAYTSPFHFLAASCSPSCTAALKTPSSPWCVD
        ++   VLEDLHAIWDWILIE LHIPHTERSLYSA+L+VSET DNREM+MGFPRNPSTSDTSGYKLFLISAYTSPFHFLAASCSPSCTAALKTPSSPWCVD
Subjt:  SLDQHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREMNMGFPRNPSTSDTSGYKLFLISAYTSPFHFLAASCSPSCTAALKTPSSPWCVD

Query:  STTPILTAASPLTFIPLRIRSRVAKLEPILDLNSAVK
        STTPILTAASPLTFIPLRIRSRVAKLEPILDLNSAVK
Subjt:  STTPILTAASPLTFIPLRIRSRVAKLEPILDLNSAVK
KHG14376.1 Actin-related protein 9 [Gossypium arboreum]3.8e-1284.09Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHA+WDWIL+E LHIPH ERSLYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
KJB38324.1 hypothetical protein B456_006G249000 [Gossypium raimondii]3.8e-1284.09Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHA+WDWIL+E LHIPH ERSLYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
KJB38325.1 hypothetical protein B456_006G249000 [Gossypium raimondii]3.8e-1284.09Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHA+WDWIL+E LHIPH ERSLYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
XP_038877353.1 actin-related protein 9 [Benincasa hispida]5.9e-1388.64Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHAIWDWILIE LHIPHTER+LYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
TrEMBL top hitse value%identityAlignment
A0A5D2JM96 Uncharacterized protein1.9e-1284.09Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHA+WDWIL+E LHIPH ERSLYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
A0A5D2P7I3 Uncharacterized protein1.9e-1284.09Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHA+WDWIL+E LHIPH ERSLYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
A0A5D2TNK8 Uncharacterized protein1.9e-1284.09Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHA+WDWIL+E LHIPH ERSLYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
A0A5J5Q923 Uncharacterized protein1.9e-1284.09Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHA+WDWIL+E LHIPH ERSLYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
A0A5J5ULI1 Uncharacterized protein1.9e-1284.09Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q VLEDLHA+WDWIL+E LHIPH ERSLYSAILVV ETFDNRE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
SwissProt top hitse value%identityAlignment
A2XQX0 Actin-related protein 95.4e-0969.05Show/hide
Query:  VLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        VLEDL  IW+WIL E LHI   +R LYSAILV+ ETFDNRE+
Subjt:  VLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
Q0JF03 Actin-related protein 95.4e-0969.05Show/hide
Query:  VLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        VLEDL  IW+WIL E LHI   +R LYSAILV+ ETFDNRE+
Subjt:  VLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
Q9LSW2 Actin-related protein 91.3e-0761.36Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q V EDL AI DWIL+E LHI H ER  + A++VV ETFD RE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
Arabidopsis top hitse value%identityAlignment
AT5G43500.1 actin-related protein 99.4e-0961.36Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q V EDL AI DWIL+E LHI H ER  + A++VV ETFD RE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
AT5G43500.2 actin-related protein 99.4e-0961.36Show/hide
Query:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM
        Q V EDL AI DWIL+E LHI H ER  + A++VV ETFD RE+
Subjt:  QHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAAATACTTTATTGAGATATGAAACAGAAAGTTCAAGCTCCAAGGATGTGAACCATGGGTCTTTGGACCAGCATGTACTTGAGGACTTGCATGCTATTTGGGA
CTGGATTTTGATAGAAAATCTGCATATCCCTCATACTGAAAGAAGCTTGTATTCTGCTATTCTGGTGGTCTCAGAAACATTTGACAACCGCGAAATGAATATGGGCTTCC
CCCGTAACCCAAGCACCTCAGACACCTCAGGATACAAACTCTTCCTGATCTCAGCATACACTTCTCCGTTCCACTTTCTTGCCGCCAGCTGCTCCCCAAGCTGCACTGCA
GCGTTGAAGACGCCGTCCTCGCCGTGGTGCGTCGATTCCACAACGCCCATTCTGACCGCCGCTTCACCTCTCACTTTCATCCCCCTCAGAATCAGGTCGCGCGTAGCCAA
ACTGGAGCCCATCTTGGACTTAAACAGTGCCGTGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAAATACTTTATTGAGATATGAAACAGAAAGTTCAAGCTCCAAGGATGTGAACCATGGGTCTTTGGACCAGCATGTACTTGAGGACTTGCATGCTATTTGGGA
CTGGATTTTGATAGAAAATCTGCATATCCCTCATACTGAAAGAAGCTTGTATTCTGCTATTCTGGTGGTCTCAGAAACATTTGACAACCGCGAAATGAATATGGGCTTCC
CCCGTAACCCAAGCACCTCAGACACCTCAGGATACAAACTCTTCCTGATCTCAGCATACACTTCTCCGTTCCACTTTCTTGCCGCCAGCTGCTCCCCAAGCTGCACTGCA
GCGTTGAAGACGCCGTCCTCGCCGTGGTGCGTCGATTCCACAACGCCCATTCTGACCGCCGCTTCACCTCTCACTTTCATCCCCCTCAGAATCAGGTCGCGCGTAGCCAA
ACTGGAGCCCATCTTGGACTTAAACAGTGCCGTGAAGTAG
Protein sequenceShow/hide protein sequence
METNTLLRYETESSSSKDVNHGSLDQHVLEDLHAIWDWILIENLHIPHTERSLYSAILVVSETFDNREMNMGFPRNPSTSDTSGYKLFLISAYTSPFHFLAASCSPSCTA
ALKTPSSPWCVDSTTPILTAASPLTFIPLRIRSRVAKLEPILDLNSAVK