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CmoCh14G018640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G018640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionplastid-lipid-associated protein 6, chloroplastic
Genome locationCmo_Chr14:14025629..14025901
RNA-Seq ExpressionCmoCh14G018640
SyntenyCmoCh14G018640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049234.1 putative plastid-lipid-associated protein 6 [Cucumis melo var. makuwa]5.2e-0678.05Show/hide
Query:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
        MAALASSVLQ PLQIR SDS  G L  SRIHRIAPSF +KC
Subjt:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC

KAG6582397.1 Plastid-lipid-associated protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.4e-13100Show/hide
Query:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
        MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
Subjt:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC

XP_004134052.1 plastid-lipid-associated protein 6, chloroplastic [Cucumis sativus]5.7e-0573.17Show/hide
Query:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
        MAALASS+LQ  LQIR SDS  G L PS IHRIAPSF +KC
Subjt:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC

XP_008438497.1 PREDICTED: probable plastid-lipid-associated protein 6, chloroplastic [Cucumis melo]5.2e-0678.05Show/hide
Query:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
        MAALASSVLQ PLQIR SDS  G L  SRIHRIAPSF +KC
Subjt:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC

XP_038899987.1 plastid-lipid-associated protein 6, chloroplastic [Benincasa hispida]3.6e-0780.49Show/hide
Query:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
        MAALASSVLQ PLQIRPSDS  G L PSRI+RIAPSF +KC
Subjt:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC

TrEMBL top hitse value%identityAlignment
A0A0A0L4C7 PAP_fibrillin domain-containing protein2.8e-0573.17Show/hide
Query:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
        MAALASS+LQ  LQIR SDS  G L PS IHRIAPSF +KC
Subjt:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC

A0A1S3AX61 probable plastid-lipid-associated protein 6, chloroplastic2.5e-0678.05Show/hide
Query:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
        MAALASSVLQ PLQIR SDS  G L  SRIHRIAPSF +KC
Subjt:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC

A0A5D3D241 Putative plastid-lipid-associated protein 62.5e-0678.05Show/hide
Query:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC
        MAALASSVLQ PLQIR SDS  G L  SRIHRIAPSF +KC
Subjt:  MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKC

A0A6J1G6L7 plastid-lipid-associated protein 6, chloroplastic5.2e-0471.43Show/hide
Query:  MAALASSVLQFPLQIRPSD-SFSGCLSPSRIHRIAPSFKIKC
        MAALASSVL  PLQI  SD S SG LSP RIH  AP+FK+KC
Subjt:  MAALASSVLQFPLQIRPSD-SFSGCLSPSRIHRIAPSFKIKC

A0A6J1IHR9 plastid-lipid-associated protein 6, chloroplastic6.8e-0469.05Show/hide
Query:  MAALASSVLQFPLQIRPSD-SFSGCLSPSRIHRIAPSFKIKC
        MAA+A+SVL  PLQI  SD S SG LSPSRIH  AP+FK+KC
Subjt:  MAALASSVLQFPLQIRPSD-SFSGCLSPSRIHRIAPSFKIKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTCTAGCAAGCTCTGTTCTTCAGTTTCCACTTCAGATCCGTCCTTCCGATTCCTTTTCTGGGTGTCTTTCTCCATCCAGAATACATCGGATTGCACCTAGTTT
CAAGATCAAGTGTTGCGCCGGCGGCCTTTGCTTTCCGGCGACGGTGTACCCAGAAGAAATTTCTCTTGGAAATCTGCTTCAGACAATGTTTACTCCGACCCCTCGTCGGC
CTCTCCGTCTGTTGATGAATACATTGGCTCACAAGTTTGAAATCATGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTCTAGCAAGCTCTGTTCTTCAGTTTCCACTTCAGATCCGTCCTTCCGATTCCTTTTCTGGGTGTCTTTCTCCATCCAGAATACATCGGATTGCACCTAGTTT
CAAGATCAAGTGTTGCGCCGGCGGCCTTTGCTTTCCGGCGACGGTGTACCCAGAAGAAATTTCTCTTGGAAATCTGCTTCAGACAATGTTTACTCCGACCCCTCGTCGGC
CTCTCCGTCTGTTGATGAATACATTGGCTCACAAGTTTGAAATCATGGGTTAG
Protein sequenceShow/hide protein sequence
MAALASSVLQFPLQIRPSDSFSGCLSPSRIHRIAPSFKIKCCAGGLCFPATVYPEEISLGNLLQTMFTPTPRRPLRLLMNTLAHKFEIMG