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CmoCh14G019080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G019080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box domain-containing protein
Genome locationCmo_Chr14:14206638..14209727
RNA-Seq ExpressionCmoCh14G019080
SyntenyCmoCh14G019080
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582437.1 hypothetical protein SDJN03_22439, partial [Cucurbita argyrosperma subsp. sororia]3.0e-11385.31Show/hide
Query:  MAQSDFLRPPMKAR-KKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------
        MAQSDFLRPPMKAR KKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK              
Subjt:  MAQSDFLRPPMKAR-KKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------

Query:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
                             TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
Subjt:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE

Query:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

KAG7018833.1 hypothetical protein SDJN02_20706 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-11899.52Show/hide
Query:  MAQSDFLRPPMKAR-KKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQ
        MAQSDFLRPPMKAR KKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQ
Subjt:  MAQSDFLRPPMKAR-KKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQ

Query:  FHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIAD
        FHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIAD
Subjt:  FHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIAD

Query:  ADKDSGTGPL
        ADKDSGTGPL
Subjt:  ADKDSGTGPL

XP_022924581.1 uncharacterized protein LOC111432022 [Cucurbita moschata]1.2e-11485.66Show/hide
Query:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------
        MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK               
Subjt:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------

Query:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH
                            TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH
Subjt:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH

Query:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

XP_022980380.1 uncharacterized protein LOC111479766 [Cucurbita maxima]3.6e-11184.02Show/hide
Query:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------
        MAQSDFLRPPMKAR KKKKRES SDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLW+SK               
Subjt:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------

Query:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH
                            TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGE+REH
Subjt:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH

Query:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

XP_023526828.1 uncharacterized protein LOC111790211 [Cucurbita pepo subsp. pepo]2.0e-10982.79Show/hide
Query:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------
        MAQSDFLRPP KAR KKKKRESV DEQGQ+NG RNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLW+SK               
Subjt:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------

Query:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH
                            TRIMREDLCAHAWQFHFNKEAP+YWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH
Subjt:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH

Query:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

TrEMBL top hitse value%identityAlignment
A0A0A0L471 F-box domain-containing protein9.3e-9774.09Show/hide
Query:  MAQSDFL--RPPMKARKKKKKRESVSDEQGQQNG-TRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK------------
        MAQSDFL      K+RKKKKKRE+VSDE+GQQN  TRN LLQDPFEVLG DLL+ ILSY+DARSVALSL VSRSWYAVASSDRLW+SK            
Subjt:  MAQSDFL--RPPMKARKKKKKRESVSDEQGQQNG-TRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK------------

Query:  -----------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEI
                               TRIMREDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDG+QTADPDDRVWGGHE CFSTVTSF+GDGEI
Subjt:  -----------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEI

Query:  REHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        REHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD +K  GTGPL
Subjt:  REHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

A0A1S3AW05 uncharacterized protein LOC103483521 isoform X29.6e-10284.02Show/hide
Query:  MAQSDFL---------RPPMKARKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMR
        MAQSDFL         +   K +KKKKKRE+VSDE+GQQN  T N +LQDPFEVLG DLLM ILSY+DARSVALSLLVSRSWYAVASSDRLW+SKTRIMR
Subjt:  MAQSDFL---------RPPMKARKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMR

Query:  EDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNH
        EDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHE CFSTVTSF+GDGEIREHYVRINRWPRMFVSRNEDWSW+MSNH
Subjt:  EDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNH

Query:  FTSYSSIADADKDSGTGPL
        FTSYSSIAD DK  GTGPL
Subjt:  FTSYSSIADADKDSGTGPL

A0A1S3AWZ4 uncharacterized protein LOC103483521 isoform X12.1e-9672.44Show/hide
Query:  MAQSDFL---------RPPMKARKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK-----
        MAQSDFL         +   K +KKKKKRE+VSDE+GQQN  T N +LQDPFEVLG DLLM ILSY+DARSVALSLLVSRSWYAVASSDRLW+SK     
Subjt:  MAQSDFL---------RPPMKARKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK-----

Query:  ------------------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTS
                                      TRIMREDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHE CFSTVTS
Subjt:  ------------------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTS

Query:  FIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        F+GDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD DK  GTGPL
Subjt:  FIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

A0A6J1E9U6 uncharacterized protein LOC1114320225.8e-11585.66Show/hide
Query:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------
        MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK               
Subjt:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------

Query:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH
                            TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH
Subjt:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH

Query:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

A0A6J1IW44 uncharacterized protein LOC1114797661.8e-11184.02Show/hide
Query:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------
        MAQSDFLRPPMKAR KKKKRES SDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLW+SK               
Subjt:  MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK---------------

Query:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH
                            TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGE+REH
Subjt:  --------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREH

Query:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAAAGTGACTTCCTCCGGCCGCCGATGAAAGCAAGGAAGAAGAAGAAGAAGCGAGAGAGTGTCTCGGATGAACAAGGGCAACAAAATGGAACCCGTAATGAACT
TCTCCAAGATCCTTTCGAGGTTTTAGGTCCTGATCTATTAATGACGATACTTAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACG
CCGTGGCTTCCAGCGATCGCCTATGGAATTCGAAGACTCGCATTATGAGGGAGGATTTATGTGCTCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCCATATACTGG
CGGAATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTGATGCGCCGATATTTCCATCCCGATGGGAGCCAAACTGCTGATCCTGATGATAGAGTATGGGGTGGGCATGA
ATGCTGCTTTTCCACGGTTACAAGTTTCATCGGCGATGGGGAGATCAGAGAACACTACGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGA
GCTGGAAGATGTCGAATCATTTCACCTCGTACTCAAGCATAGCCGATGCTGACAAGGATAGCGGGACGGGGCCACTCTAA
mRNA sequenceShow/hide mRNA sequence
AAACTGGGTTTCTATTTTGCAACCGCCATTTCCTTAGCAATGTCGGCCAGATCACAATGCTAATCGCCGATCGCGCCATCCTCTCCAAAACCCTTTTCGCCTCTTGAGCT
TTGAATTTATGGCGCAAAGTGACTTCCTCCGGCCGCCGATGAAAGCAAGGAAGAAGAAGAAGAAGCGAGAGAGTGTCTCGGATGAACAAGGGCAACAAAATGGAACCCGT
AATGAACTTCTCCAAGATCCTTTCGAGGTTTTAGGTCCTGATCTATTAATGACGATACTTAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATC
TTGGTACGCCGTGGCTTCCAGCGATCGCCTATGGAATTCGAAGACTCGCATTATGAGGGAGGATTTATGTGCTCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCCA
TATACTGGCGGAATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTGATGCGCCGATATTTCCATCCCGATGGGAGCCAAACTGCTGATCCTGATGATAGAGTATGGGGT
GGGCATGAATGCTGCTTTTCCACGGTTACAAGTTTCATCGGCGATGGGGAGATCAGAGAACACTACGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGA
AGATTGGAGCTGGAAGATGTCGAATCATTTCACCTCGTACTCAAGCATAGCCGATGCTGACAAGGATAGCGGGACGGGGCCACTCTAA
Protein sequenceShow/hide protein sequence
MAQSDFLRPPMKARKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQFHFNKEAPIYW
RNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL