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CmoCh14G019110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G019110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGDT1 family protein
Genome locationCmo_Chr14:14211508..14213095
RNA-Seq ExpressionCmoCh14G019110
SyntenyCmoCh14G019110
Gene Ontology termsGO:0006816 - calcium ion transport (biological process)
GO:0098662 - inorganic cation transmembrane transport (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0046873 - metal ion transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582441.1 hypothetical protein SDJN03_22443, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2595.45Show/hide
Query:  PPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS
        P GEYYGF VGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASG+VIAITVLKS
Subjt:  PPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS

KAG7028783.1 Protein PAM71-homolog, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1090.7Show/hide
Query:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS
        MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASG+V A TV KS
Subjt:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS

XP_022924295.1 uncharacterized protein LOC111431826 [Cucurbita moschata]8.6e-64100Show/hide
Query:  MVSYICYHLGLNADEIRFTNSRIIPFYLCNCDVAISDSDSDFWRGFNFSELFSGSTAPPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFS
        MVSYICYHLGLNADEIRFTNSRIIPFYLCNCDVAISDSDSDFWRGFNFSELFSGSTAPPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFS
Subjt:  MVSYICYHLGLNADEIRFTNSRIIPFYLCNCDVAISDSDSDFWRGFNFSELFSGSTAPPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFS

Query:  PLLDSLPSCSASGTVIAITVLKS
        PLLDSLPSCSASGTVIAITVLKS
Subjt:  PLLDSLPSCSASGTVIAITVLKS

XP_022948496.1 protein PAM71-homolog, chloroplastic [Cucurbita moschata]1.9e-1090.7Show/hide
Query:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS
        MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASG+V A TV KS
Subjt:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS

XP_023521675.1 protein PAM71-homolog, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-1090.7Show/hide
Query:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS
        MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASG+V A TV KS
Subjt:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS

TrEMBL top hitse value%identityAlignment
A0A5A7TZZ5 GDT1 family protein1.0e-0986.05Show/hide
Query:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS
        MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASG+V + TV  S
Subjt:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS

A0A6J1EEE5 uncharacterized protein LOC1114318264.2e-64100Show/hide
Query:  MVSYICYHLGLNADEIRFTNSRIIPFYLCNCDVAISDSDSDFWRGFNFSELFSGSTAPPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFS
        MVSYICYHLGLNADEIRFTNSRIIPFYLCNCDVAISDSDSDFWRGFNFSELFSGSTAPPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFS
Subjt:  MVSYICYHLGLNADEIRFTNSRIIPFYLCNCDVAISDSDSDFWRGFNFSELFSGSTAPPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFS

Query:  PLLDSLPSCSASGTVIAITVLKS
        PLLDSLPSCSASGTVIAITVLKS
Subjt:  PLLDSLPSCSASGTVIAITVLKS

A0A6J1G9C7 GDT1 family protein9.1e-1190.7Show/hide
Query:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS
        MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASG+V A TV KS
Subjt:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS

A0A6J1IBI9 GDT1 family protein1.0e-0986.05Show/hide
Query:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS
        MEGLVVRSPFVSTGKK PFSPLLDSLPSCSASG+V A  V KS
Subjt:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS

A0A6J1IBK7 GDT1 family protein2.6e-1088.37Show/hide
Query:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS
        MEGLVVRSPFVSTGKK PFSPLLDSLPSCSASG+V A TV KS
Subjt:  MEGLVVRSPFVSTGKKLPFSPLLDSLPSCSASGTVIAITVLKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCATATATTTGCTATCACTTAGGATTGAATGCAGATGAAATTCGTTTTACAAATTCGAGAATCATCCCATTTTATCTCTGCAACTGCGACGTGGCAATTTCGGA
TTCAGATTCCGATTTTTGGCGGGGATTCAACTTCTCGGAGCTGTTCTCCGGTTCAACCGCGCCGCCCGGCGAGTATTATGGTTTTACTGTAGGTGGATATGAAGTTTTAG
GAAGGAAAAGAGAACGAGAAATGGAAGGATTGGTGGTTCGTTCGCCGTTCGTTTCAACAGGGAAGAAGCTTCCCTTCTCGCCTTTGCTCGATTCTTTGCCGAGTTGTTCT
GCTTCTGGCACTGTAATTGCCATAACCGTACTGAAATCGCATGCATTTGATAGGAACTACAGACCACGATGCACGATGACCCTCAGCAATGTTTCTGCTCCATCTGTGAC
GTGCTGGCCTGGAGGAATGAGCGACCGCACCTCTGCAATCCCACGTGCGTTCTTGAACTTGCCTGTTCCTCCAGTCACTGACAAATGCGACGAGGGGCTACCAATCCTGT
ATACTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCATATATTTGCTATCACTTAGGATTGAATGCAGATGAAATTCGTTTTACAAATTCGAGAATCATCCCATTTTATCTCTGCAACTGCGACGTGGCAATTTCGGA
TTCAGATTCCGATTTTTGGCGGGGATTCAACTTCTCGGAGCTGTTCTCCGGTTCAACCGCGCCGCCCGGCGAGTATTATGGTTTTACTGTAGGTGGATATGAAGTTTTAG
GAAGGAAAAGAGAACGAGAAATGGAAGGATTGGTGGTTCGTTCGCCGTTCGTTTCAACAGGGAAGAAGCTTCCCTTCTCGCCTTTGCTCGATTCTTTGCCGAGTTGTTCT
GCTTCTGGCACTGTAATTGCCATAACCGTACTGAAATCGCATGCATTTGATAGGAACTACAGACCACGATGCACGATGACCCTCAGCAATGTTTCTGCTCCATCTGTGAC
GTGCTGGCCTGGAGGAATGAGCGACCGCACCTCTGCAATCCCACGTGCGTTCTTGAACTTGCCTGTTCCTCCAGTCACTGACAAATGCGACGAGGGGCTACCAATCCTGT
ATACTCCATAG
Protein sequenceShow/hide protein sequence
MVSYICYHLGLNADEIRFTNSRIIPFYLCNCDVAISDSDSDFWRGFNFSELFSGSTAPPGEYYGFTVGGYEVLGRKREREMEGLVVRSPFVSTGKKLPFSPLLDSLPSCS
ASGTVIAITVLKSHAFDRNYRPRCTMTLSNVSAPSVTCWPGGMSDRTSAIPRAFLNLPVPPVTDKCDEGLPILYTP