; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G019580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G019580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type domain-containing protein
Genome locationCmo_Chr14:14456369..14458733
RNA-Seq ExpressionCmoCh14G019580
SyntenyCmoCh14G019580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582483.1 hypothetical protein SDJN03_22485, partial [Cucurbita argyrosperma subsp. sororia]4.7e-12899.13Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSIQSTNDLHE+RARVVERRTRLDIDLNCPPPDECIDPTGPHDE AQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

KAG7018870.1 hypothetical protein SDJN02_20743, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-11299.02Show/hide
Query:  RRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWP
        +RARVVERRTRLDIDLNCPPPDECIDPTGPHDE AQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWP
Subjt:  RRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSWP

Query:  PFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCP
        PFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCP
Subjt:  PFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCP

Query:  ICRR
        ICRR
Subjt:  ICRR

XP_022924677.1 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Cucurbita moschata]5.6e-129100Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

XP_022980395.1 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Cucurbita maxima]6.8e-12798.27Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDE AQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDI IPSAPAL+SS+TPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

XP_023528072.1 uncharacterized protein LOC111791100 [Cucurbita pepo subsp. pepo]2.0e-12396.54Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSI+STNDLHE+RARVVERRTRLDIDLNCPPPDECIDPTGPHDE AQY N H+EQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        YSALTDVSSWPPFTIWSPRT RNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSS TPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

TrEMBL top hitse value%identityAlignment
A0A0A0L424 RING-type domain-containing protein3.3e-10380.09Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSIQS+NDLH+  +RV+ERRT LD DLNCPPPDECIDPTG  DE AQY NH++ QATDA+DEDIAIISPRKFAEARKNFRRNHFES  G V+RRNG+TEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        Y AL+DV++WPPFTIWSP T  N+VS+QEQQT HNLDLRLSCE+SSRATK KTD  IPS  AL+SSI P DR LRCAICIEPLVEETTTKCGH+FCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        E AIATQH+CPICRRKLR+RDIIRIYLPF+S
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

A0A1S3AW86 uncharacterized protein LOC1034834702.4e-10681.82Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSIQS+NDLH+  ARV+ERRT LD DLNCPPPDECIDPTGP DE AQY NH++ QATDA+DEDIAIISPRKFAEARKNFRRNHFES YG V+RRNG+TEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        Y AL+DV++WPPFTIWSP T  N+VS+QEQQT HNLDLRLSCE+SSRATK KTD  IPS  AL+SSI P DR LRCAICIEPLVEETTTKCGH+FCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        E AIATQH+CPICRRKLRKRDIIRIYLPF+S
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

A0A5A7U158 E3 ubiquitin-protein ligase RNF4-like2.4e-10681.82Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSIQS+NDLH+  ARV+ERRT LD DLNCPPPDECIDPTGP DE AQY NH++ QATDA+DEDIAIISPRKFAEARKNFRRNHFES YG V+RRNG+TEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        Y AL+DV++WPPFTIWSP T  N+VS+QEQQT HNLDLRLSCE+SSRATK KTD  IPS  AL+SSI P DR LRCAICIEPLVEETTTKCGH+FCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        E AIATQH+CPICRRKLRKRDIIRIYLPF+S
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

A0A6J1E9N0 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like2.7e-129100Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

A0A6J1IW57 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like3.3e-12798.27Show/hide
Query:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
        MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDE AQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV
Subjt:  MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEV

Query:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
        YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDI IPSAPAL+SS+TPADRKLRCAICIEPLVEETTTKCGHIFCRNCI
Subjt:  YSALTDVSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCI

Query:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
        EIAIATQHKCPICRRKLRKRDIIRIYLPFSS
Subjt:  EIAIATQHKCPICRRKLRKRDIIRIYLPFSS

SwissProt top hitse value%identityAlignment
P87176 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx87.3e-0727.82Show/hide
Query:  PFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVK-------TDIVIPSAPALNSSITPADRKL---RCAICIEPLVEETTTKCGHIFCRNCIE
        P ++ +  TN NS+  Q    +  +DL        R  K +       T+  I         + P+ ++L   +C IC++     + T CGHIFC  CI 
Subjt:  PFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVK-------TDIVIPSAPALNSSITPADRKL---RCAICIEPLVEETTTKCGHIFCRNCIE

Query:  IAIAT---QHKCPICRRKLRKRDIIRIYLPFSS
         A+ T     KCP+CRRK+    +I + +   S
Subjt:  IAIAT---QHKCPICRRKLRKRDIIRIYLPFSS

Q2KHN1 RING finger protein 1512.3e-0531.75Show/hide
Query:  LNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRI
        LN   +P D    C++C   L       C HIFC+ CI   +A Q  CP CR++++++ ++ +
Subjt:  LNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRI

Q2TBT8 RING finger protein 1513.6e-0636.51Show/hide
Query:  LNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRI
        LN  I+P D    C++C   L       C HIFC+ CI   +A Q  CP CR+++R R ++ +
Subjt:  LNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRI

Q496Y0 LON peptidase N-terminal domain and RING finger protein 33.1e-0540Show/hide
Query:  PALNSSITPADRK-LRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICR
        PAL+  +   D   L CA+C+    E  TT CGH FC  C+E  +    KCP+C+
Subjt:  PALNSSITPADRK-LRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICR

Q6LFN2 RING finger protein PFF0165c8.1e-0640.35Show/hide
Query:  RKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQH-KCPICRRKLRKRDIIRIYL
        R+L C++C+E        KCGHI+C NCI   + T++ KCP C+    K+D+ +I+L
Subjt:  RKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQH-KCPICRRKLRKRDIIRIYL

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein3.4e-1540.23Show/hide
Query:  TSSRATKVKTDIVIPSAPALNSSITP--ADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLP
        T  R+ +   D V  + P  + ++ P   + K  C IC+ P  +E +TKCGHIFC+ CI+ A++ Q KCP CR+K+  +D+IR++LP
Subjt:  TSSRATKVKTDIVIPSAPALNSSITP--ADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLP

AT3G07200.2 RING/U-box superfamily protein3.4e-1540.23Show/hide
Query:  TSSRATKVKTDIVIPSAPALNSSITP--ADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLP
        T  R+ +   D V  + P  + ++ P   + K  C IC+ P  +E +TKCGHIFC+ CI+ A++ Q KCP CR+K+  +D+IR++LP
Subjt:  TSSRATKVKTDIVIPSAPALNSSITP--ADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKRDIIRIYLP

AT5G48655.1 RING/U-box superfamily protein4.0e-1630.63Show/hide
Query:  RRTRLDIDLNCPPPDE------------CIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTD
        RR +  IDLN  P D+             I P+ P   +            DA+++D+   S   FAEA K+  RN       V V   G+T        
Subjt:  RRTRLDIDLNCPPPDE------------CIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTD

Query:  VSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIAT
             P  I + R  R   S +      +  +      SSR ++ K     P+ P       P + K  C IC+ P  EE +TKCGHIFC+ CI++AI+ 
Subjt:  VSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIAT

Query:  QHKCPICRRKLRKRDIIRIYLP
        Q KCP CR+K+  +++IR++LP
Subjt:  QHKCPICRRKLRKRDIIRIYLP

AT5G48655.2 RING/U-box superfamily protein4.0e-1630.63Show/hide
Query:  RRTRLDIDLNCPPPDE------------CIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTD
        RR +  IDLN  P D+             I P+ P   +            DA+++D+   S   FAEA K+  RN       V V   G+T        
Subjt:  RRTRLDIDLNCPPPDE------------CIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTD

Query:  VSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIAT
             P  I + R  R   S +      +  +      SSR ++ K     P+ P       P + K  C IC+ P  EE +TKCGHIFC+ CI++AI+ 
Subjt:  VSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIAT

Query:  QHKCPICRRKLRKRDIIRIYLP
        Q KCP CR+K+  +++IR++LP
Subjt:  QHKCPICRRKLRKRDIIRIYLP

AT5G48655.3 RING/U-box superfamily protein4.0e-1630.63Show/hide
Query:  RRTRLDIDLNCPPPDE------------CIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTD
        RR +  IDLN  P D+             I P+ P   +            DA+++D+   S   FAEA K+  RN       V V   G+T        
Subjt:  RRTRLDIDLNCPPPDE------------CIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTD

Query:  VSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIAT
             P  I + R  R   S +      +  +      SSR ++ K     P+ P       P + K  C IC+ P  EE +TKCGHIFC+ CI++AI+ 
Subjt:  VSSWPPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIAT

Query:  QHKCPICRRKLRKRDIIRIYLP
        Q KCP CR+K+  +++IR++LP
Subjt:  QHKCPICRRKLRKRDIIRIYLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTCAAAGTACAAATGATCTACATGAACGGAGAGCAAGAGTTGTTGAGAGAAGAACAAGATTGGACATTGACTTAAATTGTCCACCCCCGGATGAGTGCATTGA
CCCAACTGGCCCTCACGACGAAGTGGCACAGTATAATAATCATCACCGAGAACAAGCTACGGACGCAGTTGATGAGGACATTGCTATAATCTCCCCTCGGAAATTTGCTG
AAGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTAGCTATGGTGTAGTCGTCAGACGTAATGGCAGCACAGAAGTTTATAGTGCTCTCACAGATGTATCAAGTTGG
CCCCCCTTTACAATTTGGTCGCCCCGTACGAATAGGAATAGTGTATCCATACAGGAACAACAAACAACTCACAACTTGGACCTCCGCTTAAGCTGTGAAACCAGTAGTAG
GGCCACTAAGGTAAAAACTGACATTGTTATTCCTTCTGCACCTGCACTAAATAGTAGCATCACACCTGCAGATCGGAAGTTGCGGTGTGCGATCTGCATAGAACCATTGG
TCGAAGAAACGACGACAAAATGCGGGCACATTTTCTGCAGGAATTGCATTGAAATAGCCATTGCAACTCAACACAAATGTCCCATATGTCGGCGTAAGCTTAGAAAACGA
GATATTATTCGGATTTACCTTCCTTTTTCGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATTCAAAGTACAAATGATCTACATGAACGGAGAGCAAGAGTTGTTGAGAGAAGAACAAGATTGGACATTGACTTAAATTGTCCACCCCCGGATGAGTGCATTGA
CCCAACTGGCCCTCACGACGAAGTGGCACAGTATAATAATCATCACCGAGAACAAGCTACGGACGCAGTTGATGAGGACATTGCTATAATCTCCCCTCGGAAATTTGCTG
AAGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTAGCTATGGTGTAGTCGTCAGACGTAATGGCAGCACAGAAGTTTATAGTGCTCTCACAGATGTATCAAGTTGG
CCCCCCTTTACAATTTGGTCGCCCCGTACGAATAGGAATAGTGTATCCATACAGGAACAACAAACAACTCACAACTTGGACCTCCGCTTAAGCTGTGAAACCAGTAGTAG
GGCCACTAAGGTAAAAACTGACATTGTTATTCCTTCTGCACCTGCACTAAATAGTAGCATCACACCTGCAGATCGGAAGTTGCGGTGTGCGATCTGCATAGAACCATTGG
TCGAAGAAACGACGACAAAATGCGGGCACATTTTCTGCAGGAATTGCATTGAAATAGCCATTGCAACTCAACACAAATGTCCCATATGTCGGCGTAAGCTTAGAAAACGA
GATATTATTCGGATTTACCTTCCTTTTTCGAGTTAAAAAAAAAAAAAATGAACACAACACAAGAATATTGCTTCTGTGTATTATGTATTCTTTTTCTGACGACGACAACG
ACGACTAGATTTGTACTTGCACACAGTTGCATTAACAAATATAGATTTCTTGATTTCTTCTTTCTGTATGGAATGAAACTAAAAACAAAAAACAAAAACCTGTTTGATGA
GTTGTACTCTCTACTTGTATTTGAGTTTAAATAGTTCATTGATTAGAAAGGGGTGAATGAATGATTTGGCCCTCTTCTTTG
Protein sequenceShow/hide protein sequence
MSIQSTNDLHERRARVVERRTRLDIDLNCPPPDECIDPTGPHDEVAQYNNHHREQATDAVDEDIAIISPRKFAEARKNFRRNHFESSYGVVVRRNGSTEVYSALTDVSSW
PPFTIWSPRTNRNSVSIQEQQTTHNLDLRLSCETSSRATKVKTDIVIPSAPALNSSITPADRKLRCAICIEPLVEETTTKCGHIFCRNCIEIAIATQHKCPICRRKLRKR
DIIRIYLPFSS