; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G019760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G019760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L37a
Genome locationCmo_Chr14:14557327..14559371
RNA-Seq ExpressionCmoCh14G019760
SyntenyCmoCh14G019760
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0080188 - RNA-directed DNA methylation (biological process)
GO:0009536 - plastid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KHG03179.1 60S ribosomal L37a [Gossypium arboreum]1.4e-4494.95Show/hide
Query:  LLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        L FSC   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK+KAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

PIN16102.1 60S ribosomal protein L37 [Handroanthus impetiginosus]5.4e-4490.38Show/hide
Query:  MVLLF---SCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
        M+L F   SC+   KRTKK GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Subjt:  MVLLF---SCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE

Query:  QTES
        QTES
Subjt:  QTES

RXI00911.1 hypothetical protein DVH24_001145 [Malus domestica]1.8e-4497.89Show/hide
Query:  CWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        C F TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  CWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

VVA26227.1 PREDICTED: 60S ribosomal [Prunus dulcis]7.0e-4494.06Show/hide
Query:  MVLLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        MV +FS    TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  MVLLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Query:  S
        S
Subjt:  S

XP_021892858.1 60S ribosomal protein L37a-like, partial [Carica papaya]9.1e-4498.92Show/hide
Query:  FHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        F TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  FHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

TrEMBL top hitse value%identityAlignment
A0A0B0MUK9 60S ribosomal L37a6.8e-4594.95Show/hide
Query:  LLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        L FSC   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK+KAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A2G9HEY8 60S ribosomal protein L372.6e-4490.38Show/hide
Query:  MVLLF---SCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
        M+L F   SC+   KRTKK GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Subjt:  MVLLF---SCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE

Query:  QTES
        QTES
Subjt:  QTES

A0A498JZY0 Uncharacterized protein8.9e-4597.89Show/hide
Query:  CWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        C F TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  CWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A540LXG2 Uncharacterized protein8.9e-4597.89Show/hide
Query:  CWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        C F TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  CWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A5E4FEE5 PREDICTED: 60S ribosomal3.4e-4494.06Show/hide
Query:  MVLLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        MV +FS    TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  MVLLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-16.6e-4596.7Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

P0DKK2 60S ribosomal protein L37a-26.6e-4596.7Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9SRK6 Putative 60S ribosomal protein L37a-11.2e-4394.51Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9XHE4 60S ribosomal protein L37a5.0e-4598.9Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9ZRS8 60S ribosomal protein L37a4.3e-4496.67Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein8.8e-4594.51Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

AT3G60245.1 Zinc-binding ribosomal protein family protein4.4e-4494.38Show/hide
Query:  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTACTTTTCTCTTGCTGGTTTCATACTAAAAGAACCAAGAAGGCTGGAATTGTCGGCAAATACGGTACCAGATATGGTGCTAGTCTGAGGAAGCAGATTAAGAA
GATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTCTGTGGAAAGTATGCCGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAG
CCGGAGGTGCCTACACATTGAACACTGCAAGTGCGGTGACCGTTAGGAGCACAATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTACTACTTTTCTCTTGCTGGTTTCATACTAAAAGAACCAAGAAGGCTGGAATTGTCGGCAAATACGGTACCAGATATGGTGCTAGTCTGAGGAAGCAGATTAAGAA
GATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTCTGTGGAAAGTATGCCGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAG
CCGGAGGTGCCTACACATTGAACACTGCAAGTGCGGTGACCGTTAGGAGCACAATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAAAGTTCGATTTTGTTCTGTCTCGAG
TCATTACTGGTCTGTTTAGTGTAGAGTTCTTGGAAGAAGATTGTTGGATGACTTCTATTTCATGTCGTGACCCCAGAGCTTATAAACTAGCTCTGCCTTTTTGGCCACAT
TATTTCTAATTATCCTGAGTTTTTAGACACTTCTACTCTCTTTTTTGCCCAACAGCAACATTTTTTTATATGTTTTTAAATCTGACTTTTGTTGGTTAATTGTGTGGGAT
GTCAGTTTATAATCAAAAAAATACTTTCTCCATTAGCGT
Protein sequenceShow/hide protein sequence
MVLLFSCWFHTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES