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CmoCh14G020090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G020090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein phosphatase 2C 29-like
Genome locationCmo_Chr14:14724794..14727964
RNA-Seq ExpressionCmoCh14G020090
SyntenyCmoCh14G020090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049081.1 hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa]1.6e-2581.18Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGS
        MDITVPG N PEEVTRE LI+ISYEEPET LSSKR S KLSSEN+NL NGI+HN VEGKEYD  EK+RSELIAISFLES PE GS
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGS

KAG6582528.1 hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia]2.4e-7798.72Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS
        MDITVPGGNDPEEVTRE LIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS

Query:  SGKLGSENLNLVNEIDYNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKG
        SGKLGSENLNLVNEID+NLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKG
Subjt:  SGKLGSENLNLVNEIDYNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKG

KAG6597232.1 DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.4e-2265.05Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQ
        MDITVPG N  EEVTRE LIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE+D  EKYRSELI+ISFLESPPEIGS  V +LK  +    +
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQ

Query:  SSG
         +G
Subjt:  SSG

KAG7018913.1 hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-9898.96Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS
        MDITVPGGNDPEEVTRE LIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS

Query:  SGKLGSENLNLVNEIDYNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL
        SGKLGSENLNLVNEID+NLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL
Subjt:  SGKLGSENLNLVNEIDYNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL

KGN56651.1 hypothetical protein Csa_009703 [Cucumis sativus]1.8e-2472.83Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGSGTVTELK
        MD TVPG N PEEVTRE LI+ISYEEPET LSS + S K+S EN+NL NGI+HN +EGKEYD  EK+RSELIAISFLES PE GS  V ELK
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGSGTVTELK

TrEMBL top hitse value%identityAlignment
A0A0A0L967 Uncharacterized protein8.8e-2572.83Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGSGTVTELK
        MD TVPG N PEEVTRE LI+ISYEEPET LSS + S K+S EN+NL NGI+HN +EGKEYD  EK+RSELIAISFLES PE GS  V ELK
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGSGTVTELK

A0A5A7U641 Uncharacterized protein7.9e-2681.18Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGS
        MDITVPG N PEEVTRE LI+ISYEEPET LSSKR S KLSSEN+NL NGI+HN VEGKEYD  EK+RSELIAISFLES PE GS
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGS

A0A6J1HHB9 uncharacterized protein LOC1114632631.2e-2171.74Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELK
        MDITVPG N  EEVTRE LIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE+D  EKYRSELI+ISFLESPPEIGS  V +LK
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELK

A0A6J1IHW2 uncharacterized protein LOC1114738155.3e-2272.83Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELK
        MDITVPG N  EEVTRE LIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE+D  EKYRSELIAISFLESPPEIGS  V +LK
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELK

W9RTT6 Uncharacterized protein7.4e-0854.43Show/hide
Query:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESP
        MD T P    PEEVTRE LI+ISY  PE  L+SK SS KL+ E  NLV GID    +G+    +K+RSELI+IS+ +SP
Subjt:  MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAACAGTACCTGGTGGGAATGATCCTGAGGAAGTGACTCGTGAGTTGCTTATCGCCATTTCTTACGAGGAACCAGAAACAACTCTCTCTTCCAAGCGATCATC
TGGAAAGCTCAGTAGCGAAAACCTCAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGTAGAGAAATATAGATCTGAGCTGATAGCTATTT
CCTTTCTTGAGTCACCACCTGAAATTGGAAGTGGAACCGTGACCGAACTCAAGGTAACAATTTTCTCTTCAAAGCAATCATCTGGAAAGCTTGGTAGCGAAAACCTCAAT
CTGGTCAATGAGATAGACTACAATCTGGTGAAAGGGAAAGAATACAATGATGATAAATATAGATCTGAGCTGACAGCTATTTCCTTCCTCGAGTCACCACCTGAAATTGG
AAGTGGAACAGTGGCCGAACACAAGGGTCAGGAGGCAGTGGGCGTCATTGATGAAAACAAAGAAACGGGTTTAAAGCATGCTGAAAGGCCAATCAAAGTGTTTGGAGAAC
AAATTCAGTTAAGTATTCTGAGGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATAACAGTACCTGGTGGGAATGATCCTGAGGAAGTGACTCGTGAGTTGCTTATCGCCATTTCTTACGAGGAACCAGAAACAACTCTCTCTTCCAAGCGATCATC
TGGAAAGCTCAGTAGCGAAAACCTCAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGTAGAGAAATATAGATCTGAGCTGATAGCTATTT
CCTTTCTTGAGTCACCACCTGAAATTGGAAGTGGAACCGTGACCGAACTCAAGGTAACAATTTTCTCTTCAAAGCAATCATCTGGAAAGCTTGGTAGCGAAAACCTCAAT
CTGGTCAATGAGATAGACTACAATCTGGTGAAAGGGAAAGAATACAATGATGATAAATATAGATCTGAGCTGACAGCTATTTCCTTCCTCGAGTCACCACCTGAAATTGG
AAGTGGAACAGTGGCCGAACACAAGGGTCAGGAGGCAGTGGGCGTCATTGATGAAAACAAAGAAACGGGTTTAAAGCATGCTGAAAGGCCAATCAAAGTGTTTGGAGAAC
AAATTCAGTTAAGTATTCTGAGGCTGTAAATTTTGTTGGGATTTGGACCAAACAGACACTTGGCTTTCATGATTTAGGCAAATGGGGCTCTGAATAATTCGTGGGGGTTG
CAAAGGCTAAAATGCGGTGAAGAACAGGGAAATATTTAACCAAATCATGAAAATGGGGTTAAAAGAGGTTTTGATACTTAAAAGAGATGCAATAGTTTGACCTTGGGAAC
CATGGAGAGCACAATCTTAGGGCCATTTTTAGGATGCCAACAAACAAATTTCCTAAAAATTTTAGTTGGATTCCATGAATATGGTTGTTGTTGGAGCACAATATTTTAGG
TAACCATCACACTTCAAGTCTCAGTTAC
Protein sequenceShow/hide protein sequence
MDITVPGGNDPEEVTRELLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQSSGKLGSENLN
LVNEIDYNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL