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CmoCh14G020380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G020380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlutathione transferase
Genome locationCmo_Chr14:14905019..14908885
RNA-Seq ExpressionCmoCh14G020380
SyntenyCmoCh14G020380
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0006749 - glutathione metabolic process (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0006559 - L-phenylalanine catabolic process (biological process)
GO:0043564 - Ku70:Ku80 complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016034 - maleylacetoacetate isomerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0042162 - telomeric DNA binding (molecular function)
GO:0004364 - glutathione transferase activity (molecular function)
GO:0003684 - damaged DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
InterPro domainsIPR036249 - Thioredoxin-like superfamily
IPR004045 - Glutathione S-transferase, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597197.1 hypothetical protein SDJN03_10377, partial [Cucurbita argyrosperma subsp. sororia]7.7e-1576.27Show/hide
Query:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        MDFEAQAQ          L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGEQL+P
Subjt:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

KAG7028665.1 hypothetical protein SDJN02_09846, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-1576.27Show/hide
Query:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        MDFEAQAQ          L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGEQL+P
Subjt:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

XP_022934723.1 glutathione S-transferase zeta class-like [Cucurbita moschata]7.7e-1576.27Show/hide
Query:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        MDFEAQAQ          L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGEQL+P
Subjt:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

XP_023538877.1 glutathione S-transferase zeta class-like isoform X1 [Cucurbita pepo subsp. pepo]2.6e-1576.67Show/hide
Query:  IMDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        IMDFEAQAQ          L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGEQL+P
Subjt:  IMDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

XP_023538879.1 glutathione S-transferase 2-like isoform X2 [Cucurbita pepo subsp. pepo]2.6e-1576.67Show/hide
Query:  IMDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        IMDFEAQAQ          L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGEQL+P
Subjt:  IMDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

TrEMBL top hitse value%identityAlignment
A0A6J1CYY8 Glutathione transferase3.5e-1377.08Show/hide
Query:  DFEAQAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        D    ++L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGE L+P
Subjt:  DFEAQAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

A0A6J1D039 Glutathione transferase3.5e-1377.08Show/hide
Query:  DFEAQAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        D    ++L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGE L+P
Subjt:  DFEAQAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

A0A6J1D172 Glutathione transferase3.5e-1377.08Show/hide
Query:  DFEAQAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        D    ++L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGE L+P
Subjt:  DFEAQAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

A0A6J1F3M3 Glutathione transferase3.7e-1576.27Show/hide
Query:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        MDFEAQAQ          L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGEQL+P
Subjt:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

A0A6J1IDA8 Glutathione transferase1.1e-1474.58Show/hide
Query:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        M+FEAQAQ          L++YSFW+SSCSWRVRFALNLKGLSYEYRAVNLGRGEQL+P
Subjt:  MDFEAQAQ----------LLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

SwissProt top hitse value%identityAlignment
P28342 Glutathione S-transferase 14.3e-0861.9Show/hide
Query:  QLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        ++ +YSF  SSC+WRVR AL+LKGL +EY+AV+L +GE LTP
Subjt:  QLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

P57108 Glutathione S-transferase zeta class6.6e-0969.05Show/hide
Query:  QLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        +L +YS++RSSCS+RVR ALNLKGL YEY  VNL +GEQ TP
Subjt:  QLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

Q03425 Glutathione S-transferase 2 (Fragment)9.5e-0859.52Show/hide
Query:  QLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP
        ++ +YS+  SSC+WRVR AL+LKGL +EY+AV+L +GE LTP
Subjt:  QLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTP

Q9ZVQ3 Glutathione S-transferase Z16.1e-0755.32Show/hide
Query:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTPGVK
        + +L +YS+WRSSC+ RVR AL LKGL YEY  VNL +G+Q     K
Subjt:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTPGVK

Q9ZVQ4 Glutathione S-transferase Z25.6e-0865.85Show/hide
Query:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQ
        QA+L +YS+WRSSC+ RVR AL LKGL YEY  VNL +G+Q
Subjt:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQ

Arabidopsis top hitse value%identityAlignment
AT2G02380.1 glutathione S-transferase (class zeta) 24.0e-0965.85Show/hide
Query:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQ
        QA+L +YS+WRSSC+ RVR AL LKGL YEY  VNL +G+Q
Subjt:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQ

AT2G02390.1 glutathione S-transferase zeta 14.4e-0855.32Show/hide
Query:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTPGVK
        + +L +YS+WRSSC+ RVR AL LKGL YEY  VNL +G+Q     K
Subjt:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTPGVK

AT2G02390.2 glutathione S-transferase zeta 14.4e-0855.32Show/hide
Query:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTPGVK
        + +L +YS+WRSSC+ RVR AL LKGL YEY  VNL +G+Q     K
Subjt:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTPGVK

AT2G02390.3 glutathione S-transferase zeta 15.7e-0860.98Show/hide
Query:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQ
        + +L +YS+WRSSC+ RVR AL LKGL YEY  VNL +G+Q
Subjt:  QAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATGGACTTCGAAGCTCAGGCTCAGCTGCTTGTTTATTCTTTCTGGCGGAGCTCCTGCTCGTGGCGTGTACGCTTTGCGTTGAATCTTAAAGGGCTTTCTTACGA
GTACAGAGCAGTAAACCTTGGGAGAGGAGAACAATTAACTCCAGGTGTCAAGTGCCAAGTATCGTTAGCTCAAGCTAACAACAAAGCCCGTCTAGCTCAGTTGGTAGAGC
GCAAGGCTCTTAACCTTGTGGTCGTGGGTTCAATCCCCACGGTGGGCGAAAACTATGGAGGAAAAATTTGGTCCACAATAGCAACTACCATGAGCTCAGTCCAATCTACA
AAAAGGTTTCAATGA
mRNA sequenceShow/hide mRNA sequence
GTTCAAGCAGCGTCTCCTGCTGTTTCTCTTCTCGTTGATGATCATGGACTTCGAAGCTCAGGCTCAGCTGCTTGTTTATTCTTTCTGGCGGAGCTCCTGCTCGTGGCGTG
TACGCTTTGCGTTGAATCTTAAAGGGCTTTCTTACGAGTACAGAGCAGTAAACCTTGGGAGAGGAGAACAATTAACTCCAGGTGTCAAGTGCCAAGTATCGTTAGCTCAA
GCTAACAACAAAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCAATCCCCACGGTGGGCGAAAACTATGGAGGAAAAATTTGGTC
CACAATAGCAACTACCATGAGCTCAGTCCAATCTACAAAAAGGTTTCAATGA
Protein sequenceShow/hide protein sequence
MIMDFEAQAQLLVYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLTPGVKCQVSLAQANNKARLAQLVERKALNLVVVGSIPTVGENYGGKIWSTIATTMSSVQST
KRFQ