CuGenDBv2

Gene ID	CmoCh14G020950
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	acyl-CoA thioesterase 2-like
Genome location	Cmo_Chr14:15201049..15201784
RNA-Seq Expression	CmoCh14G020950
Synteny	CmoCh14G020950
Gene Ontology terms	GO:0006637 - acyl-CoA metabolic process (biological process) GO:0009062 - fatty acid catabolic process (biological process) GO:0005829 - cytosol (cellular component) GO:0047617 - acyl-CoA hydrolase activity (molecular function)
InterPro domains	IPR003703 - Acyl-CoA thioesterase IPR025652 - Acyl-CoA thioesterase II domain IPR029069 - HotDog domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7019002.1 Acyl-coenzyme A thioesterase 8, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-24

78.31

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGE---------LVVSLTQEGVIRKARAPKSSPASKL
        V + + VWFHRPLRADDWLLFV    MHAPTAYSTRCFIKGEMFNQKGE         LVVSLTQEGVIRKARAPKSSPASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGE---------LVVSLTQEGVIRKARAPKSSPASKL

KAG7028588.1 Acyl-coenzyme A thioesterase 8 [Cucurbita argyrosperma subsp. argyrosperma]

7.4e-22

67.57

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + +WFHRPLRADDWLLFV H+Q+ +PTAY+ R F+ GEMFNQKGELVV+LTQEG++RKAR+P+ +P SKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

XP_022924547.1 uncharacterized protein LOC111431999 [Cucurbita moschata]

1.0e-26

87.84

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + VWFHRPLRADDWLLFV    MHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

XP_022979208.1 uncharacterized protein LOC111479014 [Cucurbita maxima]

8.7e-23

77.03

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + VWFHRPLRADDWLLFV    MHAPT+Y+TRCF+ GEMFNQKGELVVSLTQEGVIRK +AP+SS ASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

XP_023528821.1 uncharacterized protein LOC111791647 [Cucurbita pepo subsp. pepo]

1.0e-26

87.84

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + VWFHRPLRADDWLLFV    MHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AV40 acyl-CoA thioesterase 2-like

1.2e-20

72.97

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + +WFHRPLRADDWLLFV    + APTAY+ R F+ GEMFNQKGELVVSLTQEG+IRKARAP+S PASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

A0A5A7U0P1 Acyl-CoA thioesterase 2-like

1.2e-20

72.97

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + +WFHRPLRADDWLLFV    + APTAY+ R F+ GEMFNQKGELVVSLTQEG+IRKARAP+S PASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

A0A5D3D2P9 Acyl-CoA thioesterase 2-like

1.5e-20

72.97

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + +WFHRPLRADDWLLFV    + APTAY+ R F+ GEMFNQKGELVVSLTQEG+IRKARAP+S PASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

A0A6J1E989 uncharacterized protein LOC111431999

4.8e-27

87.84

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + VWFHRPLRADDWLLFV    MHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

A0A6J1IVG9 uncharacterized protein LOC111479014

4.2e-23

77.03

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Query:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        V + + VWFHRPLRADDWLLFV    MHAPT+Y+TRCF+ GEMFNQKGELVVSLTQEGVIRK +AP+SS ASKL
Subjt:  VVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

SwissProt top hits

e value

%identity

Alignment

P0AGG2 Acyl-CoA thioesterase 2

2.4e-07

42.37

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Query:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIR
        I + +WFHRP   ++WLL+     + + +A S R F++GE + Q G LV S  QEGV+R
Subjt:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIR

P0AGG3 Acyl-CoA thioesterase 2

2.4e-07

42.37

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Query:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIR
        I + +WFHRP   ++WLL+     + + +A S R F++GE + Q G LV S  QEGV+R
Subjt:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIR

P44498 Acyl-CoA thioesterase 2

3.2e-04

33.9

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Query:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIR
        I + +WFHRP   + W L      + +  A+  R   +G++F+Q G+L+ +  QEG+IR
Subjt:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIR

Arabidopsis top hits

e value

%identity

Alignment

AT1G01710.1 Acyl-CoA thioesterase family protein

8.1e-19

59.72

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Query:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        + + +WFHRPLRAD+WLL+V    + +PTA+ TR F+ G+MFN+KGELVVSLTQE ++R+AR PK S  SKL
Subjt:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

AT4G00520.2 Acyl-CoA thioesterase family protein

1.4e-15

56.94

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Query:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL
        + + +WFHRP+RADDWLLFV    + +PTA  +R F  G+MFN+KGELVVSLTQE V+R+A   K S  +KL
Subjt:  IPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

Sequences

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CDS sequence

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mRNA sequence

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ATGAGGCCTTTGGGGAAAGTCCAAAGCAAAGCCATAAGACCGCTCAAAGTGGACAATATCATACCATTGTGGAGGGTCGTGATTCCTAATATGGTGTGGTTTCACCGACC
TTTAAGAGCTGACGACTGGCTGCTATTTGTGAAGCATGAACAGATGCACGCGCCTACTGCCTACAGCACGCGCTGTTTCATTAAGGGCGAGATGTTCAACCAAAAGGGCG
AGCTCGTCGTCTCGTTGACTCAAGAAGGCGTTATTCGGAAGGCGAGAGCACCCAAGTCCTCTCCAGCCTCAAAGCTATGAAGTGTGTCATCTAATGTGGTAGCTTTCAAC
CTATACTATTCTGTACTATTTGTCCATATGAATGGCTGCAGAAAAAACACAGACTACATTCCTTTTCCCTTCTCCAAATTAGCAGAATATTATGGTGAGCTTTCAAAGGT
TCAATATCTAAAGCAATAACTATGTACAGCATAC

Protein sequence

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MRPLGKVQSKAIRPLKVDNIIPLWRVVIPNMVWFHRPLRADDWLLFVKHEQMHAPTAYSTRCFIKGEMFNQKGELVVSLTQEGVIRKARAPKSSPASKL

CmoCh14G020950 (gene) of Cucurbita moschata (Rifu) v1 genome