CuGenDBv2

Gene ID	CmoCh14G021030
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein PAIR1 isoform X1
Genome location	Cmo_Chr14:15237860..15250228
RNA-Seq Expression	CmoCh14G021030
Synteny	CmoCh14G021030
Gene Ontology terms	GO:0009553 - embryo sac development (biological process) GO:0009555 - pollen development (biological process) GO:0042138 - meiotic DNA double-strand break formation (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0051026 - chiasma assembly (biological process)
InterPro domains	IPR034546 - Protein PAIR1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008438048.1 PREDICTED: protein PAIR1 isoform X3 [Cucumis melo]

3.0e-153

79.58

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ
        MRLKINKACDLS ISVLPPQSRR NALTTGQQAPQLRSQPSQQSFS GLSS+HGMYSQLSQNSFDEVVTNEQRFS+QDRENSIKKNSFFPP S+ +EDCQ
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ

Query:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG
        L LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA +DGG
Subjt:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG

Query:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---
        FKLISDQLK DAYQERLHEISD LS+LEKQVQAS LKLKNDFISTFT+EM AM+ TLKKPL+KFPPHSIQSPE T C+        +C + S++ +V   
Subjt:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---

Query:  ----------------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
                        V KAFCTSSVV ++DP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+DV+
Subjt:  ----------------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

XP_023526419.1 protein PAIR1-like isoform X1 [Cucurbita pepo subsp. pepo]

8.7e-169

86.67

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPPSFFREDCQL
        MRLKINKACDLS ISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFS+QDRENSIKKNSFFPPSFFREDCQL
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPPSFFREDCQL

Query:  SLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGF
        SLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMI+SSSLLQSMNKEHDDMKATLDGGF
Subjt:  SLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGF

Query:  KLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS-------IQSP---------EPTCVSKCLHSS-
        KLISDQLKNDAYQER+HEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS       + +P         +P   + C+ ++ 
Subjt:  KLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS-------IQSP---------EPTCVSKCLHSS-

Query:  ---------NCSVVKKAFCTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
                     V+KAFCTSSVVKKEDPKKVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDV+
Subjt:  ---------NCSVVKKAFCTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

XP_023526420.1 protein PAIR1-like isoform X2 [Cucurbita pepo subsp. pepo]

3.5e-170

86.9

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPPSFFREDCQL
        MRLKINKACDLS ISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFS+QDRENSIKKNSFFPPSFFREDCQL
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPPSFFREDCQL

Query:  SLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGF
        SLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMI+SSSLLQSMNKEHDDMKATLDGGF
Subjt:  SLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGF

Query:  KLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS-------IQSP---------EPTCVSKCLHSS-
        KLISDQLKNDAYQER+HEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS       + +P         +P   + C+ ++ 
Subjt:  KLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS-------IQSP---------EPTCVSKCLHSS-

Query:  ---------NCSVVKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
                     V+KAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDV+
Subjt:  ---------NCSVVKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

XP_038882627.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida]

1.4e-155

81.48

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ
        MRLKINKACDLS ISVLPP SRRSNALTTGQQAPQLRSQPSQQSFS GLSS+HGMYSQLSQNSFDEVVTNEQRFS+QDRENSIKKNSFFPP S+ REDCQ
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ

Query:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG
        L+LSKSSTSLTQRWK TPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKM+V+SS LQSMNK+HDDMKATLDGG
Subjt:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG

Query:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---
        FKLIS+QLK DAYQERL+EIS+VLS+LEKQVQAS LKLKNDFISTFTQE+ AMVCTLK PL+KFPPHSIQSPE T C+        +C + S++ +V   
Subjt:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---

Query:  ----------------VKKAFCTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
                        V K FCT SV KK+DPKKVIPFSE Q LVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDV+
Subjt:  ----------------VKKAFCTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

XP_038882642.1 putative recombination initiation defects 3 isoform X2 [Benincasa hispida]

5.8e-157

81.7

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ
        MRLKINKACDLS ISVLPP SRRSNALTTGQQAPQLRSQPSQQSFS GLSS+HGMYSQLSQNSFDEVVTNEQRFS+QDRENSIKKNSFFPP S+ REDCQ
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ

Query:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG
        L+LSKSSTSLTQRWK TPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKM+V+SS LQSMNK+HDDMKATLDGG
Subjt:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG

Query:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---
        FKLIS+QLK DAYQERL+EIS+VLS+LEKQVQAS LKLKNDFISTFTQE+ AMVCTLK PL+KFPPHSIQSPE T C+        +C + S++ +V   
Subjt:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---

Query:  ----------------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
                        V K FCT SV KK+DPKKVIPFSEQ LVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDV+
Subjt:  ----------------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AV35 protein PAIR1 isoform X2

3.6e-152

79.37

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ
        MRLKINKACDLS ISVLPPQSRR NALTTGQQAPQLRSQPSQQSFS GLSS+HGMYSQLSQNSFDEVVTNEQRFS+QDRENSIKKNSFFPP S+ +EDCQ
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ

Query:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG
        L LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA +DGG
Subjt:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG

Query:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---
        FKLISDQLK DAYQERLHEISD LS+LEKQVQAS LKLKNDFISTFT+EM AM+ TLKKPL+KFPPHSIQSPE T C+        +C + S++ +V   
Subjt:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---

Query:  ----------------VKKAFCTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
                        V KAFCTSSVV ++DP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+DV+
Subjt:  ----------------VKKAFCTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

A0A1S3AVJ5 protein PAIR1 isoform X3

1.5e-153

79.58

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ
        MRLKINKACDLS ISVLPPQSRR NALTTGQQAPQLRSQPSQQSFS GLSS+HGMYSQLSQNSFDEVVTNEQRFS+QDRENSIKKNSFFPP S+ +EDCQ
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ

Query:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG
        L LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA +DGG
Subjt:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG

Query:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---
        FKLISDQLK DAYQERLHEISD LS+LEKQVQAS LKLKNDFISTFT+EM AM+ TLKKPL+KFPPHSIQSPE T C+        +C + S++ +V   
Subjt:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---

Query:  ----------------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
                        V KAFCTSSVV ++DP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+DV+
Subjt:  ----------------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

A0A1S4DSK1 protein PAIR1 isoform X1

4.7e-152

79.16

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ
        MRLKINKACDLS ISVLPPQSRR NALTTGQQAPQLRSQPSQQSFS GLSS+HGMYSQLSQNSFDEVVTNEQRFS+QDRENSIKKNSFFPP S+ +EDCQ
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ

Query:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG
        L LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA +DGG
Subjt:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG

Query:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---
        FKLISDQLK DAYQERLHEISD LS+LEKQVQAS LKLKNDFISTFT+EM AM+ TLKKPL+KFPPHSIQSPE T C+        +C + S++ +V   
Subjt:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPT-CVS-------KC-LHSSNCSV---

Query:  ----------------VKKAFCTSSVVKKEDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
                        V KAFCTSSVV ++DP KVIPFSE  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+DV+
Subjt:  ----------------VKKAFCTSSVVKKEDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

A0A6J1FTV4 protein PAIR1 isoform X2

2.0e-150

79.31

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ
        MRLKINKACDLS ISVLPPQS RSNALTTGQQAPQLRSQPSQQSFS GLSS HG  SQ SQNSFDEVVTNEQRFS+QDRENSIKKNSFFPP S+ RE+CQ
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ

Query:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG
        L LSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQISLDVEGIWQK+IV+SSLLQSMNKEHDDMK+TLDGG
Subjt:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG

Query:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPTC------------------VSKCLH
        FKLISDQLK DAYQERLHEISDVLSALEKQVQAS LKL+NDFISTFTQEM AMVCTLKKPL+KFP   I+SPE T                      C+ 
Subjt:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPTC------------------VSKCLH

Query:  SSNCSV----------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
        ++              V K FCTS+V KKED KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDV+
Subjt:  SSNCSV----------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

A0A6J1FY69 protein PAIR1 isoform X1

1.0e-151

79.31

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ
        MRLKINKACDLS ISVLPPQS RSNALTTGQQAPQLRSQPSQQSFS GLSS HG  SQ SQNSFDEVVTNEQRFS+QDRENSIKKNSFFPP S+ RE+CQ
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPP-SFFREDCQ

Query:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG
        L LSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQISLDVEGIWQK+IV+SSLLQSMNKEHDDMK+TLDGG
Subjt:  LSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGG

Query:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPTC------------------VSKCLH
        FKLISDQLK DAYQERLHEISDVLSALEKQVQAS LKL+NDFISTFTQEM AMVCTLKKPL+KFP   I+SPE T                      C+ 
Subjt:  FKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPTC------------------VSKCLH

Query:  SSNCSV----------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ
        ++              V K FCTS+V KKED KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDV+
Subjt:  SSNCSV----------VKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQ

SwissProt top hits

e value

%identity

Alignment

Q0WWX5 Putative recombination initiation defects 3

5.3e-52

43.53

Show/hide

Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEH---GMYSQLSQNSFDEVVTNEQRFSTQDRENSIKK-NSFFPP-SFFR
        M++ INKACDL  ISV PP  RRS      Q + QLRSQ SQQSFS G SS     G +SQ++Q+S DE++ N+QRFS+Q+R+ S+KK +S  PP +  R
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEH---GMYSQLSQNSFDEVVTNEQRFSTQDRENSIKK-NSFFPP-SFFR

Query:  EDCQLSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKAT
        ED QL  S+SS+ L++RW S  + +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K++ L+ E I QK+ +  + LQ + KE  D KA+
Subjt:  EDCQLSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKAT

Query:  LDGGFKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEP
        LDGG K I ++   D  QE+L +I  +L+ + +QV+ +  K++ +   TFT+E+  +              S+++PEP
Subjt:  LDGGFKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEP

Q75RY2 Protein PAIR1

5.0e-26

37.84

Show/hide

Query:  MRLKINKACDLSFISVLPPQ--SRRSNALTTGQQAPQLRSQP-------SQQSFSLGLSSE--HGMYSQLSQNSFDEVV-------TNEQRFSTQDRENS
        M+LK+NKACD++ ISVLPP+     S A  +G  A  + SQP       SQQSFS G S+   H   SQ SQ S D+ +       T +QRF   D  +S
Subjt:  MRLKINKACDLSFISVLPPQ--SRRSNALTTGQQAPQLRSQP-------SQQSFSLGLSSE--HGMYSQLSQNSFDEVV-------TNEQRFSTQDRENS

Query:  IKKNSFFP---PSFFREDCQLSLSKSSTSLTQRWKSTPLPDSKCQV-GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVS
         K+ S  P    S  RE+ QL L+K  ++   RW  +       QV  E+++R+   + +S++K G ++DS+ SD++QLN+ MK+ SLD   I QK+ V 
Subjt:  IKKNSFFP---PSFFREDCQLSLSKSSTSLTQRWKSTPLPDSKCQV-GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVS

Query:  SSLLQSMNKEHDDMKATLDGGFKLISDQLK-NDAYQERLHEISDVLSALEKQVQASHLK
         S LQ + K  DD+KA      K   DQ    ++   +L+EIS  L+ L+ Q+QA  L+
Subjt:  SSLLQSMNKEHDDMKATLDGGFKLISDQLK-NDAYQERLHEISDVLSALEKQVQASHLK

Arabidopsis top hits

e value

%identity

Alignment

AT1G01690.1 putative recombination initiation defects 3

3.8e-53

43.53

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Query:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEH---GMYSQLSQNSFDEVVTNEQRFSTQDRENSIKK-NSFFPP-SFFR
        M++ INKACDL  ISV PP  RRS      Q + QLRSQ SQQSFS G SS     G +SQ++Q+S DE++ N+QRFS+Q+R+ S+KK +S  PP +  R
Subjt:  MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEH---GMYSQLSQNSFDEVVTNEQRFSTQDRENSIKK-NSFFPP-SFFR

Query:  EDCQLSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKAT
        ED QL  S+SS+ L++RW S  + +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K++ L+ E I QK+ +  + LQ + KE  D KA+
Subjt:  EDCQLSLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKAT

Query:  LDGGFKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEP
        LDGG K I ++   D  QE+L +I  +L+ + +QV+ +  K++ +   TFT+E+  +              S+++PEP
Subjt:  LDGGFKLISDQLKNDAYQERLHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEP

Sequences

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CDS sequence

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ATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGTTTTATCTCCGTTCTTCCTCCTCAATCCAGGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCG
ATCACAACCTTCGCAACAATCCTTTTCTCTGGGTCTGTCATCTGAGCACGGCATGTATTCTCAGCTTTCTCAGAACTCGTTTGACGAAGTCGTGACAAATGAACAGAGAT
TTAGCACTCAAGACCGAGAAAACTCAATAAAGAAGAATTCCTTTTTTCCTCCTAGTTTTTTCAGAGAAGATTGCCAGTTGTCACTCTCTAAATCTTCAACCAGTTTAACG
CAGCGATGGAAATCAACTCCTCTTCCAGACTCTAAATGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGTACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTT
GGATTCTCTTCATAGTGATATTCTGCAACTGAACAAAGGAATGAAGCAAATTTCTCTCGATGTTGAAGGCATATGGCAAAAGATGATTGTTAGCAGTAGCTTGCTGCAAT
CCATGAACAAAGAACATGATGACATGAAAGCTACTCTTGATGGAGGCTTCAAATTAATATCCGATCAACTTAAGAACGATGCATACCAAGAAAGGCTACATGAGATATCC
GATGTTCTTTCTGCATTGGAAAAGCAAGTACAAGCATCTCACCTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAACGCAATGGTCTGTACCTTAAA
GAAACCCTTGAAGAAATTTCCACCTCACTCTATTCAATCTCCTGAGCCAACCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGTAGCGTGGTGAAAAAGGCCTTTTGCA
CTAGTAGCGTGGTGAAAAAGGAAGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCCTGGTGCTGGAAAGGGAATATAGAGTTATTGTCGATTCCGATGAGGAGATC
GAAAGAAGCTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGAGAAGATGTGCAAGATGGGTCAGCACGATCAGGATGTAAAAACGCCTTTCTTCTAGGTTGCGGCTAA

mRNA sequence

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Protein sequence

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MRLKINKACDLSFISVLPPQSRRSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQLSQNSFDEVVTNEQRFSTQDRENSIKKNSFFPPSFFREDCQLSLSKSSTSLT
QRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIS
DVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEPTCVSKCLHSSNCSVVKKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEI
ERSFSCLIEEKKTGEDVQDGSARSGCKNAFLLGCG

CmoCh14G021030 (gene) of Cucurbita moschata (Rifu) v1 genome