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CmoCh14G022300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G022300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S acidic ribosomal protein P1-like
Genome locationCmo_Chr14:15810571..15811731
RNA-Seq ExpressionCmoCh14G022300
SyntenyCmoCh14G022300
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133766.1 60S acidic ribosomal protein P1 [Cucumis sativus]1.8e-4088.5Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAV-AAAPAGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYA+LIL DD IPITAEKIATLVKAAKV  V+SYW+ LFAKLAEKR I DLILNVGAGGGAAV AAAPAGGAAGG AAAAAPPPEEKKEEPK
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAV-AAAPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]1.2e-3987.61Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAA-PAGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYA+LIL DD IPITAEKIATLVKAA V  V+SYW+SLFAKLAEKR I DLILNVGAGGGAAVAAA PAGGAA G AAAAAPPPEEKKEEPK
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAA-PAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_022924313.1 60S acidic ribosomal protein P1-like [Cucurbita moschata]1.6e-49100Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
        MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

XP_022980127.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]1.4e-4593.75Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
        MSIGEIACSYASLILCDDGIPITAEK+ATLV AAKV  V+SYWF+LFAKLAEKR IEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

XP_023528725.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo]1.3e-4695.54Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
        MSIGEIACSYASLILCDDGIPITAEK+ATLVKAAKV +V+SYWFSLFAKLAEKR IEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0L5M7 Uncharacterized protein8.7e-4188.5Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAV-AAAPAGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYA+LIL DD IPITAEKIATLVKAAKV  V+SYW+ LFAKLAEKR I DLILNVGAGGGAAV AAAPAGGAAGG AAAAAPPPEEKKEEPK
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAV-AAAPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A1S3AUG9 60S acidic ribosomal protein P1-like5.6e-4087.61Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAA-PAGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYA+LIL DD IPITAEKIATLVKAA V  V+SYW+SLFAKLAEKR I DLILNVGAGGGAAVAAA PAGGAA G AAAAAPPPEEKKEEPK
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAA-PAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A5D3DB57 60S acidic ribosomal protein P1-like5.6e-4087.61Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAA-PAGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYA+LIL DD IPITAEKIATLVKAA V  V+SYW+SLFAKLAEKR I DLILNVGAGGGAAVAAA PAGGAA G AAAAAPPPEEKKEEPK
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAA-PAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A6J1EC26 60S acidic ribosomal protein P1-like7.8e-50100Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
        MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

A0A6J1IQJ8 60S acidic ribosomal protein P1-like6.9e-4693.75Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
        MSIGEIACSYASLILCDDGIPITAEK+ATLV AAKV  V+SYWF+LFAKLAEKR IEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-26.9e-2764.29Show/hide
Query:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVA-AAPAGGAAGGAAAAAAPPPEEKKEEPKE
        ++GE+ACSYA +IL D+GI IT++KIATLVKAA V +++SYW  LFAK+AEKR + DLI+NVGAGGG   A  + A  AA G AAAAAP  EEKK+EP E
Subjt:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVA-AAPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

P52855 60S acidic ribosomal protein P13.2e-3274.11Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
        M+ GE+AC YA+LIL DDGI ITAEKIAT+VKAA + +V+SYW +LFAKL EKR +EDLIL+VG+GGGAA  AA A   AGGAAAAAAP  EEKKEE KE
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-13.1e-2763.96Show/hide
Query:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEE
        ++GE+ACSYA +IL D+GI ITA+KIATLVKAA V  ++SYW  LFAK+AEKR + DLI+NVGAGGG     A A  AAGG AAAA    E+KK+EP EE
Subjt:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEE

Query:  SDDDMGFSLFD
        SD D+GF LFD
Subjt:  SDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-31.1e-2766.07Show/hide
Query:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEE-KKEEPKE
        ++GE+ACSYA +IL D+GI ITA+KIATLVKAA V  ++SYW  LFAK+AEKR + DLI+NVGAGGG     A A  AAGG AAAAAP  EE KK+EP E
Subjt:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

Q9HGV0 60S acidic ribosomal protein P11.3e-2563.39Show/hide
Query:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE
        MS  E+ACSYA+LIL DDG+ ITA+KI TL+ AAKV  V+  W SLFAK  E + I+DL+ NVG+GG AA AA   G AAG AA A A   EEKKEE KE
Subjt:  MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD+DMGF LFD
Subjt:  ESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family2.2e-2863.96Show/hide
Query:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEE
        ++GE+ACSYA +IL D+GI ITA+KIATLVKAA V  ++SYW  LFAK+AEKR + DLI+NVGAGGG     A A  AAGG AAAA    E+KK+EP EE
Subjt:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEE

Query:  SDDDMGFSLFD
        SD D+GF LFD
Subjt:  SDDDMGFSLFD

AT1G01100.2 60S acidic ribosomal protein family2.2e-2863.96Show/hide
Query:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEE
        ++GE+ACSYA +IL D+GI ITA+KIATLVKAA V  ++SYW  LFAK+AEKR + DLI+NVGAGGG     A A  AAGG AAAA    E+KK+EP EE
Subjt:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEE

Query:  SDDDMGFSLFD
        SD D+GF LFD
Subjt:  SDDDMGFSLFD

AT1G01100.4 60S acidic ribosomal protein family2.2e-2863.96Show/hide
Query:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEE
        ++GE+ACSYA +IL D+GI ITA+KIATLVKAA V  ++SYW  LFAK+AEKR + DLI+NVGAGGG     A A  AAGG AAAA    E+KK+EP EE
Subjt:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEE

Query:  SDDDMGFSLFD
        SD D+GF LFD
Subjt:  SDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family7.5e-2966.07Show/hide
Query:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEE-KKEEPKE
        ++GE+ACSYA +IL D+GI ITA+KIATLVKAA V  ++SYW  LFAK+AEKR + DLI+NVGAGGG     A A  AAGG AAAAAP  EE KK+EP E
Subjt:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family7.5e-2966.07Show/hide
Query:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEE-KKEEPKE
        ++GE+ACSYA +IL D+GI ITA+KIATLVKAA V  ++SYW  LFAK+AEKR + DLI+NVGAGGG     A A  AAGG AAAAAP  EE KK+EP E
Subjt:  SIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCGGAGAAATTGCTTGCTCCTACGCTTCTCTCATCCTCTGCGATGATGGCATCCCTATTACCGCAGAAAAAATTGCTACGCTTGTAAAGGCAGCTAAG
GTTTATCAAGTGGATTCTTACTGGTTCAGCCTTTTTGCTAAGCTGGCTGAGAAGCGTAAAATTGAAGATCTGATTCTCAATGTTGGTGCTGGTGGTGGCGCCGCA
GTCGCTGCTGCTCCAGCTGGCGGAGCTGCTGGTGGCGCTGCTGCCGCCGCTGCTCCTCCACCGGAAGAGAAAAAGGAAGAACCAAAGGAAGAGAGTGACGATGAT
ATGGGATTCAGTTTGTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGATCGGAGAAATTGCTTGCTCCTACGCTTCTCTCATCCTCTGCGATGATGGCATCCCTATTACCGCAGAAAAAATTGCTACGCTTGTAAAGGCAGCTAAG
GTTTATCAAGTGGATTCTTACTGGTTCAGCCTTTTTGCTAAGCTGGCTGAGAAGCGTAAAATTGAAGATCTGATTCTCAATGTTGGTGCTGGTGGTGGCGCCGCA
GTCGCTGCTGCTCCAGCTGGCGGAGCTGCTGGTGGCGCTGCTGCCGCCGCTGCTCCTCCACCGGAAGAGAAAAAGGAAGAACCAAAGGAAGAGAGTGACGATGAT
ATGGGATTCAGTTTGTTTGATTAGGTCAAGATATGGCATCGCATATTTTGTGCTCGGTTGATTATCTTTTAAATGCGAGTGGGTTCTCTTTATTTTATAGATATG
TAATTTTGGACGTCCTTGACAAATTTGGCTCAAGTTTTAATTTGAATGTGATCGAATTGCAACTTTTTGGTTGAGGTTTATTTTTTATATATACCATTATATTCT
CCCGCTGGTACGCGCTAGGTATATATATGTTCTTTCTCCATTTGTGTAGTTTCTGTCTTTCTCCTTGACAATTGGAGCCCAATAGCTTTTGTTGCTGAAGTTCTT
CAACGATGATGTCTGACTTTAATTATTAGACCTGAGAATGACATTTTATTTTCTCTCTTTTTCC
Protein sequenceShow/hide protein sequence
MSIGEIACSYASLILCDDGIPITAEKIATLVKAAKVYQVDSYWFSLFAKLAEKRKIEDLILNVGAGGGAAVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEESDDD
MGFSLFD