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CmoCh15G000080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G000080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionQueuine tRNA-ribosyltransferase accessory subunit 2
Genome locationCmo_Chr15:54327..55703
RNA-Seq ExpressionCmoCh15G000080
SyntenyCmoCh15G000080
Gene Ontology termsGO:0101030 - tRNA-guanine transglycosylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008479 - queuine tRNA-ribosyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036511 - Queuine tRNA-ribosyltransferase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578306.1 Queuine tRNA-ribosyltransferase accessory subunit 2, partial [Cucurbita argyrosperma subsp. sororia]5.0e-2993.15Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHFCSKGFC
        MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLH    G C
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHFCSKGFC

KAG7015882.1 hypothetical protein SDJN02_20985, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-2990.67Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHFCSKGFCSV
        MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLH    G C +
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHFCSKGFCSV

XP_004138668.1 queuine tRNA-ribosyltransferase accessory subunit 2 [Cucumis sativus]2.8e-2486.57Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF
        MKFAVKAW NGKARTGFLQL +C +A++TPALLLSTRKGLP+F SPDLLPSLPSPDSHLLQFSPLHF
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF

XP_008441158.1 PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis melo]6.3e-2485.07Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF
        MKFAVKAW NGKARTGFLQL +C +A++TPALLLST KGLPNF SPDLLPSLPSPDSH+LQFSPLHF
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF

XP_038885042.1 queuine tRNA-ribosyltransferase accessory subunit 2-like [Benincasa hispida]3.3e-2589.55Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF
        MKFAVKAW NGKARTGFLQL +C +A+ETPALLLSTRKGLPNF SPDLLPSLPSPDSHLLQFSPLHF
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF

TrEMBL top hitse value%identityAlignment
A0A0A0LMD8 TGT domain-containing protein1.4e-2486.57Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF
        MKFAVKAW NGKARTGFLQL +C +A++TPALLLSTRKGLP+F SPDLLPSLPSPDSHLLQFSPLHF
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF

A0A1S3B3I7 Queuine tRNA-ribosyltransferase accessory subunit 23.0e-2485.07Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF
        MKFAVKAW NGKARTGFLQL +C +A++TPALLLST KGLPNF SPDLLPSLPSPDSH+LQFSPLHF
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF

A0A5A7T128 Queuine tRNA-ribosyltransferase accessory subunit 23.0e-2485.07Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF
        MKFAVKAW NGKARTGFLQL +C +A++TPALLLST KGLPNF SPDLLPSLPSPDSH+LQFSPLHF
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF

A0A6J1DE50 Queuine tRNA-ribosyltransferase accessory subunit 21.5e-2386.57Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF
        MKFAVKAW NGKARTG LQL +C +A+ETPALLLSTRKGL NF SPDLLPSLPSPDSHLLQFSPLHF
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF

A0A6J1JNK0 Queuine tRNA-ribosyltransferase accessory subunit 22.9e-2283.58Show/hide
Query:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF
        MKFAVKAW N KARTG LQL +C +A++TPALLLST KGLPNF SPDLLPSLPSPDSHLLQFSPLHF
Subjt:  MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCGCGGTGAAGGCATGGGGCAACGGCAAGGCGCGCACCGGATTTCTACAGCTCGTCCACTGCGCTTCCGCCATGGAGACTCCCGCGTTACTTCTCTCTACTCG
CAAAGGACTGCCTAATTTCAGCTCTCCTGATCTTCTTCCCTCTCTCCCTTCGCCTGATTCTCACCTCCTCCAATTCAGTCCTCTTCACTTCTGTAGCAAGGGATTCTGTT
CAGTGCCTTCCAAAATGTGA
mRNA sequenceShow/hide mRNA sequence
AGTGGCTGAAAAGTGGCGTCCATATATAAAAGGAGTTCAACATTTCAAACAGAATTGAGCGCCAAAGCTTTTGTCTCTATTTAGAGAGAATGAAATTCGCGGTGAAGGCA
TGGGGCAACGGCAAGGCGCGCACCGGATTTCTACAGCTCGTCCACTGCGCTTCCGCCATGGAGACTCCCGCGTTACTTCTCTCTACTCGCAAAGGACTGCCTAATTTCAG
CTCTCCTGATCTTCTTCCCTCTCTCCCTTCGCCTGATTCTCACCTCCTCCAATTCAGTCCTCTTCACTTCTGTAGCAAGGGATTCTGTTCAGTGCCTTCCAAAATGTGA
Protein sequenceShow/hide protein sequence
MKFAVKAWGNGKARTGFLQLVHCASAMETPALLLSTRKGLPNFSSPDLLPSLPSPDSHLLQFSPLHFCSKGFCSVPSKM