CuGenDBv2

Gene ID	CmoCh15G000170
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein PARTING DANCERS
Genome location	Cmo_Chr15:129438..132028
RNA-Seq Expression	CmoCh15G000170
Synteny	CmoCh15G000170
Gene Ontology terms	GO:0000712 - resolution of meiotic recombination intermediates (biological process) GO:0007140 - male meiotic nuclear division (biological process) GO:0009555 - pollen development (biological process) GO:0010845 - positive regulation of reciprocal meiotic recombination (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0005634 - nucleus (cellular component) GO:0005694 - chromosome (cellular component)
InterPro domains	IPR010994 - RuvA domain 2-like IPR039172 - Protein parting dancers

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7015892.1 Protein PARTING DANCERS, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.0e-134

96.46

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Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAP-------DLIFNCGGLSVAFAFVTSWDCSNTSSIFCR
        MGSLSQRHVNQMDGNQVK KNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAP       DLIFNCGGLSVAFAFVTSWDCSNTSSIFCR
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAP-------DLIFNCGGLSVAFAFVTSWDCSNTSSIFCR

Query:  VQKLMKQFANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDD
        VQKLMKQFANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKR+VQVMDAFRRVMSSVPGLDD
Subjt:  VQKLMKQFANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDD

Query:  HDANSLNQAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        HDANSLNQAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
Subjt:  HDANSLNQAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

XP_022152444.1 protein PARTING DANCERS isoform X1 [Momordica charantia]

8.3e-123

90.28

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Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        M +LSQ   N+M GNQVKAKNS GGVCLMSN+WRDEQHPS INFMSNFLS NSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIF RVQKL KQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFY VVALPTKEQNDSFV+SYFRNGMEIGKPPF+PVQD+EMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQ MDAFRRV++SVPG+DDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKE ILENTDLS DKAERIR+FFRDPKFYLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

XP_022938483.1 protein PARTING DANCERS [Cucurbita moschata]

7.7e-137

100

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Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

XP_022992780.1 protein PARTING DANCERS [Cucurbita maxima]

4.7e-134

98.79

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Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        MGSLSQR VNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLS NSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKE ILENTDLSVDKAERIRSFFRDPKFYLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

XP_038884563.1 protein PARTING DANCERS isoform X1 [Benincasa hispida]

3.2e-122

90.28

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Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        M + SQR  NQMDGN+VKAKNSGGGVCLMSN+WRDEQHPS INFMSNFL  NSFRLNFVPI PDLIFNCGGLSVAFAF+TSWDCSNTS I+ RVQKL KQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFYVVV LPTKEQNDSFVQSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQDV+ KLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKE ILENTDLSV+KAERIRSFFRDPK YLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMP7 Uncharacterized protein

1.3e-121

89.47

Show/hide

Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        M + SQR  +QM GNQVKAKN GGGVCLMSN+WRDEQHPS INF+SNFL +NSFRLNFVPIAPDLIFNCGGLSVAFAF+TSW+CSNTSSIF RVQKL KQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FAN YVVV LPTKEQNDSFVQSYFRNGMEIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQD++SKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKE ILENTDLSV+KAERIRSFFRDPK YLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

A0A6J1DDY5 protein PARTING DANCERS isoform X2

1.4e-120

89.47

Show/hide

Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        M +LSQ   N+M GNQVKAKNS GGVCLMSN+WRDEQHPS INFMSNFLS NSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIF RVQKL KQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFY VVALPTKEQNDSFV+SYFRNGMEIGKPPF+PVQD+EMGFEKIVKIAHSRGACKQQDVMSKLRTE  RSVQ MDAFRRV++SVPG+DDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKE ILENTDLS DKAERIR+FFRDPKFYLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

A0A6J1DG15 protein PARTING DANCERS isoform X1

4.0e-123

90.28

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Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        M +LSQ   N+M GNQVKAKNS GGVCLMSN+WRDEQHPS INFMSNFLS NSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIF RVQKL KQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFY VVALPTKEQNDSFV+SYFRNGMEIGKPPF+PVQD+EMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQ MDAFRRV++SVPG+DDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKE ILENTDLS DKAERIR+FFRDPKFYLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

A0A6J1FJ08 protein PARTING DANCERS

3.7e-137

100

Show/hide

Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

A0A6J1JWN6 protein PARTING DANCERS

2.3e-134

98.79

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Query:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
        MGSLSQR VNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLS NSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ
Subjt:  MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQ

Query:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN
        QAIGSIEAIAKASKE ILENTDLSVDKAERIRSFFRDPKFYLSPKIN
Subjt:  QAIGSIEAIAKASKECILENTDLSVDKAERIRSFFRDPKFYLSPKIN

SwissProt top hits

e value

%identity

Alignment

F4IDW9 Protein PARTING DANCERS

7.4e-82

68.16

Show/hide

Query:  GVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVALPTKEQNDSFVQSYF
        GVC+MSN W+ EQ PS INF+S FLSANSFRLNFV I PDLIFNCGG+S+AF FVT WD SN +SIF RV++L  QFA  YVV  L TKEQ+DSF++SYF
Subjt:  GVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVALPTKEQNDSFVQSYF

Query:  RNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKECILENTDLS
        +  ME GKP FV V D EMGFEKIVKIAHSRG CKQQ V SKL+ ERKR+VQ  + F R ++S+P ++ HDAN+L QAIGSIEAIAKASKE IL NTDLS
Subjt:  RNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKECILENTDLS

Query:  VDKAERIRSFFRDPKFYLSPKIN
          KA+ +  FF+DP+FYLSPK N
Subjt:  VDKAERIRSFFRDPKFYLSPKIN

Q6L5B5 Protein PARTING DANCERS homolog

7.4e-82

65.33

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Query:  GGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVALPTKEQNDSFVQS
        G GVC MS  WRD+Q PS INF++ FL+ANS+RLNF+ I+PD IFN G LSVAF F T+WDC N  ++F RV  L +Q  + YVVVA+PTKEQN+SF +S
Subjt:  GGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVALPTKEQNDSFVQS

Query:  YFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKECILENTD
        Y + GM++G P FVPV D EMGFEKIVKIAH+ G CKQQD++S+L+ ER+++VQ  D+F RV++S+PG+D+HDAN+L QAIGSIEAIAKASK+ ILENTD
Subjt:  YFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKECILENTD

Query:  LSVDKAERIRSFFRDPKFYLSPKIN
        LS DKAE I  FFRDP++YLSPKIN
Subjt:  LSVDKAERIRSFFRDPKFYLSPKIN

Arabidopsis top hits

e value

%identity

Alignment

AT1G12790.1 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

5.3e-83

68.16

Show/hide

Query:  GVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVALPTKEQNDSFVQSYF
        GVC+MSN W+ EQ PS INF+S FLSANSFRLNFV I PDLIFNCGG+S+AF FVT WD SN +SIF RV++L  QFA  YVV  L TKEQ+DSF++SYF
Subjt:  GVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVALPTKEQNDSFVQSYF

Query:  RNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKECILENTDLS
        +  ME GKP FV V D EMGFEKIVKIAHSRG CKQQ V SKL+ ERKR+VQ  + F R ++S+P ++ HDAN+L QAIGSIEAIAKASKE IL NTDLS
Subjt:  RNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKECILENTDLS

Query:  VDKAERIRSFFRDPKFYLSPKIN
          KA+ +  FF+DP+FYLSPK N
Subjt:  VDKAERIRSFFRDPKFYLSPKIN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAGTTTGTCACAGAGACATGTTAATCAAATGGATGGAAATCAAGTGAAAGCAAAAAATTCTGGCGGTGGAGTCTGTTTGATGAGCAATATATGGAGAGATGAGCA
GCATCCATCCACCATCAATTTTATGTCTAATTTCCTAAGCGCAAATTCATTTCGCCTCAATTTTGTTCCAATCGCTCCAGACTTGATATTCAATTGTGGGGGTTTATCAG
TGGCTTTTGCTTTTGTGACAAGTTGGGATTGCAGCAATACGTCATCAATCTTTTGCAGAGTTCAGAAGTTGATGAAGCAGTTTGCAAATTTCTATGTTGTTGTTGCCCTT
CCAACCAAGGAGCAGAATGATTCATTTGTTCAATCTTACTTCAGAAATGGGATGGAAATTGGTAAGCCACCATTTGTACCAGTTCAGGATGTTGAGATGGGCTTTGAGAA
GATTGTGAAGATAGCACACTCCCGTGGAGCATGCAAGCAGCAAGATGTCATGTCAAAACTGAGGACTGAGAGGAAGAGATCCGTGCAAGTCATGGATGCTTTTCGTAGAG
TCATGTCTTCTGTACCAGGCCTTGATGATCATGATGCGAATTCGCTAAATCAAGCTATTGGTTCAATCGAGGCAATCGCGAAAGCATCCAAGGAGTGCATTTTGGAGAAC
ACAGATCTGTCAGTGGACAAGGCAGAGAGAATTAGGAGCTTTTTCAGGGATCCAAAGTTCTACCTCAGTCCCAAAATAAATTGA

mRNA sequence

Show/hide mRNA sequence

TTCCCATTGTCCGGTTCTTTCTGGAATGTGGGATCCTTTTAGATCGTACCGGAAAGTTCGTTTCGCACAGTATTTAGATTTTCGCGCGCGATATCTTCTCCTCCCGCTGC
TTCTCTCCCTCTCTCTCCCCCGGTTCTGTACAAAGTTTATGTTATCACTGAGAGTTTGCTATGGGGAGTTTGTCACAGAGACATGTTAATCAAATGGATGGAAATCAAGT
GAAAGCAAAAAATTCTGGCGGTGGAGTCTGTTTGATGAGCAATATATGGAGAGATGAGCAGCATCCATCCACCATCAATTTTATGTCTAATTTCCTAAGCGCAAATTCAT
TTCGCCTCAATTTTGTTCCAATCGCTCCAGACTTGATATTCAATTGTGGGGGTTTATCAGTGGCTTTTGCTTTTGTGACAAGTTGGGATTGCAGCAATACGTCATCAATC
TTTTGCAGAGTTCAGAAGTTGATGAAGCAGTTTGCAAATTTCTATGTTGTTGTTGCCCTTCCAACCAAGGAGCAGAATGATTCATTTGTTCAATCTTACTTCAGAAATGG
GATGGAAATTGGTAAGCCACCATTTGTACCAGTTCAGGATGTTGAGATGGGCTTTGAGAAGATTGTGAAGATAGCACACTCCCGTGGAGCATGCAAGCAGCAAGATGTCA
TGTCAAAACTGAGGACTGAGAGGAAGAGATCCGTGCAAGTCATGGATGCTTTTCGTAGAGTCATGTCTTCTGTACCAGGCCTTGATGATCATGATGCGAATTCGCTAAAT
CAAGCTATTGGTTCAATCGAGGCAATCGCGAAAGCATCCAAGGAGTGCATTTTGGAGAACACAGATCTGTCAGTGGACAAGGCAGAGAGAATTAGGAGCTTTTTCAGGGA
TCCAAAGTTCTACCTCAGTCCCAAAATAAATTGA

Protein sequence

Show/hide protein sequence

MGSLSQRHVNQMDGNQVKAKNSGGGVCLMSNIWRDEQHPSTINFMSNFLSANSFRLNFVPIAPDLIFNCGGLSVAFAFVTSWDCSNTSSIFCRVQKLMKQFANFYVVVAL
PTKEQNDSFVQSYFRNGMEIGKPPFVPVQDVEMGFEKIVKIAHSRGACKQQDVMSKLRTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKECILEN
TDLSVDKAERIRSFFRDPKFYLSPKIN

CmoCh15G000170 (gene) of Cucurbita moschata (Rifu) v1 genome