CuGenDBv2

Gene ID	CmoCh15G001990
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	COX assembly mitochondrial protein
Genome location	Cmo_Chr15:953382..956296
RNA-Seq Expression	CmoCh15G001990
Synteny	CmoCh15G001990
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578501.1 hypothetical protein SDJN03_22949, partial [Cucurbita argyrosperma subsp. sororia]

9.9e-42

98.88

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYA QHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

XP_008459466.1 PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]

1.2e-39

93.26

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTND+VL+EMKREYA QHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

XP_022938373.1 uncharacterized protein DDB_G0275933 [Cucurbita moschata]

5.2e-43

100

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

XP_022993759.1 uncharacterized protein DDB_G0275933 [Cucurbita maxima]

9.9e-42

98.88

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYA QHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

XP_023549716.1 uncharacterized protein DDB_G0275933 [Cucurbita pepo subsp. pepo]

3.7e-41

97.75

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCR+QAKELNNCLHQYTNDTVLEEMKREYA QHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX6 COX assembly mitochondrial protein

2.4e-38

91.01

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YASKYAECAYGRTLSVVFKCRNQAKELNNCLH YTND++L+EMKREYA Q DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

A0A1S3CA82 COX assembly mitochondrial protein

5.8e-40

93.26

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTND+VL+EMKREYA QHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

A0A6J1BW91 COX assembly mitochondrial protein

1.6e-37

90.91

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGK
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYAS+YAECAYGRTLSVV+KCR+QAKELN+CLHQYTNDTVLEEMKR+YA Q DGK
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGK

A0A6J1FIP8 COX assembly mitochondrial protein

2.5e-43

100

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

A0A6J1K100 COX assembly mitochondrial protein

4.8e-42

98.88

Show/hide

Query:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYA QHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

SwissProt top hits

e value

%identity

Alignment

Q552P9 Uncharacterized protein DDB_G0275933

4.8e-07

37.88

Show/hide

Query:  VEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREY
        V+  LR K+K +++KEC  + + +A+C+  + +SVV++CR   + + NCL +YT    L  MKRE+
Subjt:  VEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREY

Arabidopsis top hits

e value

%identity

Alignment

AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like

4.9e-31

73.26

Show/hide

Query:  YIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGK
        Y+++ARENHVKKKVEEALRSKMK KA+ ECD Y SKYA+CA GRT SVV+ CR QA+ELN CLHQ+TND VLEEMKR Y  Q +GK
Subjt:  YIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTTACATTCAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGATGAAGGAATGCGATCATTACGCTTC
GAAATATGCTGAATGCGCCTATGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCAATACACCAACGACACCGTGT
TGGAAGAGATGAAGCGGGAATATGCACATCAACACGATGGGAAGCCGTGA

mRNA sequence

Show/hide mRNA sequence

TATTAAAAGCCAATTCAAGTAATTTCAACAAAAATGGAATGTGAATAAAAAATTTAAGATTTAGGGTTTGGATTAAATGGAAAAAAGATGTTAAAATTGGGGAGTGGAAT
TGATACCGCCGGAGTTGGCTTCGAAGTTCGAACGTCCTGCTTTCGACGAAACTGAAGGCATTTTGACGGCTACTTCCTGTTCTCCTACTGCTCTCTGAAATGGGTTACAT
TCAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGATGAAGGAATGCGATCATTACGCTTCGAAATATGCTG
AATGCGCCTATGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCAATACACCAACGACACCGTGTTGGAAGAGATG
AAGCGGGAATATGCACATCAACACGATGGGAAGCCGTGAGGAAAAGCATAACATCATTCAATGAGAAAACTGAAGAGTGCTGTTATGGGTCAATCTCAGGTGAACTTTCA
GACGATACTATGTTGAATTTGTCACTAGAAGCATTGATATATTAGTAAGAACTTAACGAAAGTTGAGGCTTTATGGATTTTGTAATCTGGATAAGCAAAGGAATTCTATT
TTATTTGGATAAGAATGATCTTTCATCTCTAATCATAGTGTAAATTTCGAAGCTACTCTTCTTTGTCAAAAACCTTTACCAGGAATGAGTTCCATCTGCCATTAAGGCTC
CTCGTTCATAGATTTTAGGGAGCCATTATCTGATTTATGGATTCCATCCTTCTTGCCTTGCTTGGAGTGTAAAACGAGATGAGCAATAAATCATG

Protein sequence

Show/hide protein sequence

MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYAHQHDGKP

CmoCh15G001990 (gene) of Cucurbita moschata (Rifu) v1 genome