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CmoCh15G002480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G002480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr15:1222402..1222722
RNA-Seq ExpressionCmoCh15G002480
SyntenyCmoCh15G002480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039429.1 hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa]8.2e-1143.12Show/hide
Query:  MGGRCSFWG--VAVAALMVTIILCSSNSSRASSLGRANATYGEVE-VELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHC
        MGGR SF G  + V  +M   IL SS S R S L +ANATYG V   E+++  +I RFL        T  T  PN+  C NGPGN  G C G+  N++ C
Subjt:  MGGRCSFWG--VAVAALMVTIILCSSNSSRASSLGRANATYGEVE-VELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHC

Query:  NSYAGASAC
        N Y     C
Subjt:  NSYAGASAC

KAA0039430.1 hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa]8.5e-1650Show/hide
Query:  MGGRCSFWGVAVAALMVTI-ILCSSNSSRASSLGRANATYGEVEV-ELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCN
        MG R SF G+ +  +M+ I I CSS+S R S L +ANATY  V   ELL+  +I R+L F  +D  T KT + NV +CGNG GN    CSGS +NKK CN
Subjt:  MGGRCSFWGVAVAALMVTI-ILCSSNSSRASSLGRANATYGEVEV-ELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCN

Query:  SYAGASAC
        +Y G  AC
Subjt:  SYAGASAC

KAG6578548.1 hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]6.9e-5097.17Show/hide
Query:  MGGRCSFWGVAVAALMVTIILCSSNSSRASSLGRANATYGEVEVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCNSY
        MGGRCSFWGVAVAALMVTIILCSSNSSRASSLGRANATYGEVEVELLVRREIARFLNFKNM V+TDKTQNP VKSCGNGPGNPMGDCSGSPTNKKHCNSY
Subjt:  MGGRCSFWGVAVAALMVTIILCSSNSSRASSLGRANATYGEVEVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCNSY

Query:  AGASAC
        AGASAC
Subjt:  AGASAC

KGN52518.1 hypothetical protein Csa_007870 [Cucumis sativus]6.9e-1042.86Show/hide
Query:  VAVAALMVTIILCSSNSSRASSLGRANATYGEV-EVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCNSYAGASAC
        + V  +M+  IL SS++ RAS L +ANATYG V   ELL+  ++ R+L + + D  T KT++  V  C NG GN    C GS +NKK CN+Y     C
Subjt:  VAVAALMVTIILCSSNSSRASSLGRANATYGEV-EVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCNSYAGASAC

KGN52519.1 hypothetical protein Csa_008872 [Cucumis sativus]3.0e-1344.95Show/hide
Query:  MGGRCSFWG--VAVAALMVTIILCSSNSSRASSLGRANATYGEV-EVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHC
        MGGR SF G  + V  +M   IL SS S R S L +ANAT G V   EL+++ +I R+L FK     T  T +PN+ +CGNG GN    C G+  N + C
Subjt:  MGGRCSFWG--VAVAALMVTIILCSSNSSRASSLGRANATYGEV-EVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHC

Query:  NSYAGASAC
        N+Y G +AC
Subjt:  NSYAGASAC

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ4 Uncharacterized protein3.4e-1042.86Show/hide
Query:  VAVAALMVTIILCSSNSSRASSLGRANATYGEV-EVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCNSYAGASAC
        + V  +M+  IL SS++ RAS L +ANATYG V   ELL+  ++ R+L + + D  T KT++  V  C NG GN    C GS +NKK CN+Y     C
Subjt:  VAVAALMVTIILCSSNSSRASSLGRANATYGEV-EVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCNSYAGASAC

A0A0A0KUG7 Uncharacterized protein1.5e-1344.95Show/hide
Query:  MGGRCSFWG--VAVAALMVTIILCSSNSSRASSLGRANATYGEV-EVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHC
        MGGR SF G  + V  +M   IL SS S R S L +ANAT G V   EL+++ +I R+L FK     T  T +PN+ +CGNG GN    C G+  N + C
Subjt:  MGGRCSFWG--VAVAALMVTIILCSSNSSRASSLGRANATYGEV-EVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHC

Query:  NSYAGASAC
        N+Y G +AC
Subjt:  NSYAGASAC

A0A0A0KVT8 Uncharacterized protein2.2e-0943.52Show/hide
Query:  MGGRCSFWGVA-VAALMVTIILCSSNSSRASSLGRANATYGEVEV-ELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCN
        MG R SF G+  V  +M+  IL SS+S R S L +ANATY  V   EL++  +I R L        T KT   NV +CGNG GN    C GS +N+  C+
Subjt:  MGGRCSFWGVA-VAALMVTIILCSSNSSRASSLGRANATYGEVEV-ELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCN

Query:  SYAGASAC
        +Y G +AC
Subjt:  SYAGASAC

A0A5D3BNE4 Uncharacterized protein4.0e-1143.12Show/hide
Query:  MGGRCSFWG--VAVAALMVTIILCSSNSSRASSLGRANATYGEVE-VELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHC
        MGGR SF G  + V  +M   IL SS S R S L +ANATYG V   E+++  +I RFL        T  T  PN+  C NGPGN  G C G+  N++ C
Subjt:  MGGRCSFWG--VAVAALMVTIILCSSNSSRASSLGRANATYGEVE-VELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHC

Query:  NSYAGASAC
        N Y     C
Subjt:  NSYAGASAC

A0A5D3BR80 Uncharacterized protein4.1e-1650Show/hide
Query:  MGGRCSFWGVAVAALMVTI-ILCSSNSSRASSLGRANATYGEVEV-ELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCN
        MG R SF G+ +  +M+ I I CSS+S R S L +ANATY  V   ELL+  +I R+L F  +D  T KT + NV +CGNG GN    CSGS +NKK CN
Subjt:  MGGRCSFWGVAVAALMVTI-ILCSSNSSRASSLGRANATYGEVEV-ELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCN

Query:  SYAGASAC
        +Y G  AC
Subjt:  SYAGASAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGTCGGTGTTCGTTTTGGGGAGTAGCAGTGGCGGCGTTGATGGTGACAATCATCCTCTGTTCCAGCAACAGCAGCAGAGCTTCGAGTCTGGGCAGGGCC
AACGCCACGTACGGCGAGGTGGAGGTGGAATTGCTGGTGCGTCGTGAGATAGCTCGGTTTTTGAATTTTAAAAACATGGACGTCCACACAGACAAAACCCAGAAC
CCGAACGTCAAATCTTGTGGTAACGGCCCGGGAAACCCCATGGGCGACTGCAGTGGTAGCCCCACTAATAAGAAACACTGCAACTCATACGCCGGCGCCAGCGCC
TGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGTCGGTGTTCGTTTTGGGGAGTAGCAGTGGCGGCGTTGATGGTGACAATCATCCTCTGTTCCAGCAACAGCAGCAGAGCTTCGAGTCTGGGCAGGGCC
AACGCCACGTACGGCGAGGTGGAGGTGGAATTGCTGGTGCGTCGTGAGATAGCTCGGTTTTTGAATTTTAAAAACATGGACGTCCACACAGACAAAACCCAGAAC
CCGAACGTCAAATCTTGTGGTAACGGCCCGGGAAACCCCATGGGCGACTGCAGTGGTAGCCCCACTAATAAGAAACACTGCAACTCATACGCCGGCGCCAGCGCC
TGCTAG
Protein sequenceShow/hide protein sequence
MGGRCSFWGVAVAALMVTIILCSSNSSRASSLGRANATYGEVEVELLVRREIARFLNFKNMDVHTDKTQNPNVKSCGNGPGNPMGDCSGSPTNKKHCNSYAGASA
C