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CmoCh15G002610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G002610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein 230
Genome locationCmo_Chr15:1264898..1267223
RNA-Seq ExpressionCmoCh15G002610
SyntenyCmoCh15G002610
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141452.1 transmembrane protein 230 [Cucumis sativus]5.0e-5492.24Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYS L++DDND+D +GNQ DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_008459349.1 PREDICTED: transmembrane protein 230 [Cucumis melo]2.9e-5491.38Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RYSSL++DDND+D +G++FDPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022939930.1 transmembrane protein 230-like [Cucurbita moschata]4.0e-59100Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022961740.1 transmembrane protein 230-like [Cucurbita moschata]2.7e-5593.1Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+ DDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_023521905.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]1.3e-5492.24Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+ DDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

TrEMBL top hitse value%identityAlignment
A0A0A0KXG1 Transmembrane protein 2302.4e-5492.24Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYS L++DDND+D +GNQ DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A1S3C9X7 Transmembrane protein 2301.4e-5491.38Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RYSSL++DDND+D +G++FDPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1FP54 Transmembrane protein 2301.9e-59100Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1HAY7 Transmembrane protein 2301.3e-5593.1Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+ DDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1K312 Transmembrane protein 2301.9e-59100Show/hide
Query:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2308.2e-1542.86Show/hide
Query:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS L STDD  +DL   +  P          KIP+K+IALA  L  +G+FL+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q5R8X3 Transmembrane protein 2306.2e-1544.64Show/hide
Query:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS L STDD  +DL       +F  TP    KIP+K+IALA  L  +G+FL+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q5ZLH4 Transmembrane protein 2302.8e-1542.86Show/hide
Query:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS L STDD  +DL   +  P          KIP+K+IALA+ L  +G+FL+ +   +L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q8CIB6 Transmembrane protein 2308.2e-1542.86Show/hide
Query:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS L STDD  +DL   +  P          KIP+K+IALA  L  +G+FL+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q96A57 Transmembrane protein 2303.7e-1544.64Show/hide
Query:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS L STDD  +DL       +F  TP    KIP+K+IALA  L  +G+FL+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSL-STDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)3.3e-1141.89Show/hide
Query:  PWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K I+LA+ LL  G+  + L +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)8.9e-4165.29Show/hide
Query:  MASRRNVRYSSLSTDDNDLDL-----DGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET
        MASRR+VRY+ L  D++D        +   FDPRF Y+PKAFD++PWKSIALA+FLLFLG  LL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYET
Subjt:  MASRRNVRYSSLSTDDNDLDL-----DGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET

Query:  RIAYYAWRGANGYRFASIPDY
        RIAYY+WRGA GYRFA+IP Y
Subjt:  RIAYYAWRGANGYRFASIPDY

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)5.6e-1141.89Show/hide
Query:  PWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K IALA+ LL  G+  +   +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGAGACGGAATGTTCGTTACAGCTCCCTTTCTACTGATGATAATGATCTCGATTTAGATGGAAATCAATTTGACCCTCGCTTTTACTATACACCGAAA
GCTTTTGACAAGATCCCGTGGAAATCCATCGCTCTTGCTATATTCCTGTTATTTCTTGGATCATTTCTTCTCTTTCTTTCGTACTTCGTATTGACTGGTCATATG
GCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCGTTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGGGGTGCT
AATGGATATCGCTTCGCATCGATTCCCGATTACTAG
mRNA sequenceShow/hide mRNA sequence
TGTCAAACACATCTCGTTCGCTGCTGAATCGAGGACGCGACGACGACGACTTTCTGGACCTTCAGCCTCCGGTGAGATTTTAAGAATCTTCTACTTGACGGAATT
TCTTAGATTTTAGGATCCATTCTGCATCATCTTCTTCTGTTGTGCCTGATTCTATTTTTTGTTCCAGGTGGCTCCATTGTGTTGAATTTTGAAGACTGCATTCTT
GATATTTCCTGTCATGGCTTCGAGACGGAATGTTCGTTACAGCTCCCTTTCTACTGATGATAATGATCTCGATTTAGATGGAAATCAATTTGACCCTCGCTTTTA
CTATACACCGAAAGCTTTTGACAAGATCCCGTGGAAATCCATCGCTCTTGCTATATTCCTGTTATTTCTTGGATCATTTCTTCTCTTTCTTTCGTACTTCGTATT
GACTGGTCATATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCGTTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGC
ATGGAGGGGTGCTAATGGATATCGCTTCGCATCGATTCCCGATTACTAGGTGTTCATATCGCGGTGGTGTATGCTTGTCTCATTTCTCTTTCAACGTAAAACTAT
CATATAAAGTCAGAAAATGGTTTGTACAGAATCACATCTCTCGAGTTTGTAATGTATTCATCTCTTGTTCCTCTTTCATAGGCTGTTTAGGGTTAGGAAAACGAT
TAATGATGTAGCTTTAGCTCATTTACTTGACAAGTCCTGTAGCTAAAGTCAAAAACTTAATGCCCTTGCAAACACTTCGAGTGAGATTTATCCATGATTAACGGT
GTGGATCAAGGTTTTTATGTAGGATTTGAAGTTGTATGGATTACATTGTGCAGAAGAAAGCATTGTTTCATGACAAAGAACTACCACATGAATCTTTAGTTGCAG
C
Protein sequenceShow/hide protein sequence
MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA
NGYRFASIPDY