CuGenDBv2

Gene ID	CmoCh15G002980
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Translation factor GUF1 homolog, mitochondrial
Genome location	Cmo_Chr15:1400327..1402360
RNA-Seq Expression	CmoCh15G002980
Synteny	CmoCh15G002980
Gene Ontology terms	GO:0045727 - positive regulation of translation (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005759 - mitochondrial matrix (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0097177 - mitochondrial ribosome binding (molecular function)
InterPro domains	IPR006297 - Elongation factor 4 IPR013842 - GTP-binding protein LepA, C-terminal IPR038363 - LepA, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7016148.1 Translation factor GUF1-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-30

100

Show/hide

Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

XP_022964900.1 translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita moschata]

1.1e-27

94.59

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

XP_022991182.1 translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita maxima]

1.1e-27

94.59

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

XP_023553579.1 translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]

1.1e-27

94.59

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

XP_023553581.1 translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]

1.1e-27

94.59

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

TrEMBL top hits

e value

%identity

Alignment

A0A1U7YWP0 Translation factor GUF1 homolog, mitochondrial

1.2e-27

91.89

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSK+IARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

A0A6J1HK65 Translation factor GUF1 homolog, mitochondrial

5.2e-28

94.59

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

A0A6J1HM47 Translation factor GUF1 homolog, mitochondrial

5.2e-28

94.59

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

A0A6J1JL24 Translation factor GUF1 homolog, mitochondrial

5.2e-28

94.59

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

A0A6J1JU42 Translation factor GUF1 homolog, mitochondrial

5.2e-28

94.59

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

SwissProt top hits

e value

%identity

Alignment

B8B2R1 Translation factor GUF1 homolog, mitochondrial

2.0e-29

86.49

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAA+GSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

B9RUN8 Translation factor GUF1 homolog, mitochondrial

4.1e-30

90.54

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSK++ARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

C5Z3W1 Translation factor GUF1 homolog, mitochondrial

1.6e-29

87.84

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAAIGSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Q5VQ69 Translation factor GUF1 homolog, mitochondrial

2.0e-29

86.49

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFEITIQAA+GSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Q9FLE4 Translation factor GUF1 homolog, mitochondrial

4.2e-27

83.78

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFE+ IQAAIGSKIIAR+TISA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIP EA  +ILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Arabidopsis top hits

e value

%identity

Alignment

AT5G08650.1 Small GTP-binding protein

3.6e-21

64.38

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKV
        QMF++ IQA IGSK+IA E +SA RK+VLAKCYGGD++RK+KLL+KQ  GKK MK +G VD+PQEA   +LK+
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKV

AT5G39900.1 Small GTP-binding protein

3.0e-28

83.78

Show/hide

Query:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        QMFE+ IQAAIGSKIIAR+TISA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIP EA  +ILKVS
Subjt:  QMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGCATCATTCGATTACGAGGATTCAGAGTATCAACAAGCAGATTTGGCAAATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGAT
CTCGGCCACGAGGAAAAATGTTCTTGCAAAGTGTTATGGTGGAGATGTTACTCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTG
GATCTGTTGATATTCCTCAGGAAGCAATTCATGAAATTCTGAAGGTTTCATAGGTTGAAAAAATCAGAGTAAATTTATGAACCATACTTATTACAGCAAGAGTTTTCTCA
ATTGGCCAGATACCCAGAAGATATATTCCACCGGTCTTGATCGATGATAGATAAATGTGGGATCTTCAACATGCTCCCTCAAGATCGTGTAAGCCTCTTTCTTCTTTTTG
ATGTACGATAATCA

Protein sequence

Show/hide protein sequence

MHHSITRIQSINKQIWQMFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

CmoCh15G002980 (gene) of Cucurbita moschata (Rifu) v1 genome