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CmoCh15G003100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G003100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25
Genome locationCmo_Chr15:1447855..1449825
RNA-Seq ExpressionCmoCh15G003100
SyntenyCmoCh15G003100
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578608.1 CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia]8.7e-46100Show/hide
Query:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
        MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
Subjt:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA

KAG6602472.1 CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2686.36Show/hide
Query:  FIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
        + G IDNASPASRRATD+QWK+IG  KHVFHWHSDFYSVSKRRVPNGPDPIHNRRV NSKQPP+RA
Subjt:  FIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA

KAG7016157.1 ylbH, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3498.61Show/hide
Query:  RFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHN
        +FLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHN
Subjt:  RFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHN

KAG7033147.1 CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3884.44Show/hide
Query:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
        M  NCRF + LFG FLFLG+IWFSFIG IDNASPASRRATD+QWK+IG  KHVFHWHSDFYSVSKRRVPNGPDPIHNRRV NSKQPP+RA
Subjt:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA

KGN52425.1 hypothetical protein Csa_008367 [Cucumis sativus]6.7e-3886.52Show/hide
Query:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIR
        M S C FLKSLFGAFLFLG+IWFSFIGVIDNAS ASRR TD+QWK+IGR KH FHWHSDFYSVSKRRVPNGPDPIHNRRV NS+QPPIR
Subjt:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIR

TrEMBL top hitse value%identityAlignment
A0A0A0KS32 Uncharacterized protein3.2e-3886.52Show/hide
Query:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIR
        M S C FLKSLFGAFLFLG+IWFSFIGVIDNAS ASRR TD+QWK+IGR KH FHWHSDFYSVSKRRVPNGPDPIHNRRV NS+QPPIR
Subjt:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIR

A0A5N5GL02 CLAVATA3/ESR (CLE)-related protein 251.8e-1752.58Show/hide
Query:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDV-------QWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
        M S  + L+++FGA L LGV WF   G++ N S A + A  V        WK+IGR KH   W S F  VSKRRVPNGPDPIHNRRV  ++QPP RA
Subjt:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDV-------QWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA

A0A6A1VIF3 CLAVATA3/ESR (CLE)-related protein 254.4e-1951.04Show/hide
Query:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDN----ASPASRRATDV--QWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
        MV + R  ++LFG  LF+GVIWF  +G++ N     S  + R+T++   WK+IGR KHV HW SD   VS+RRVPNGPDPIHNRR   +++PP R+
Subjt:  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDN----ASPASRRATDV--QWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA

A0A6J1HAQ4 uncharacterized protein LOC111461653 isoform X22.2e-2689.06Show/hide
Query:  GVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
        G IDNASPASRRATD+QWK+IG  KHVFHWHSDFYSVSKRRVPNGPDPIHNRRV NSKQPP+RA
Subjt:  GVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA

A0A6J1HAS8 uncharacterized protein LOC111461653 isoform X12.2e-2689.06Show/hide
Query:  GVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
        G IDNASPASRRATD+QWK+IG  KHVFHWHSDFYSVSKRRVPNGPDPIHNRRV NSKQPP+RA
Subjt:  GVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA

SwissProt top hitse value%identityAlignment
Q8LFL4 CLAVATA3/ESR (CLE)-related protein 252.3e-0938.27Show/hide
Query:  LKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQ-WKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPP
        +++L G    LG+I F  +G++ N++P+   + +V+  +  G+  ++FH       VSKR+VPNGPDPIHNR+   S++PP
Subjt:  LKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQ-WKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPP

Arabidopsis top hitse value%identityAlignment
AT1G69970.2 CLAVATA3/ESR-RELATED 262.9e-0773.33Show/hide
Query:  YSVSKRRVPNGPDPIHNRRVGNSKQPPIRA
        Y  SKR+VP GPDPIHNRR GNS++PP RA
Subjt:  YSVSKRRVPNGPDPIHNRRVGNSKQPPIRA

AT3G28455.1 CLAVATA3/ESR-RELATED 251.7e-1038.27Show/hide
Query:  LKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQ-WKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPP
        +++L G    LG+I F  +G++ N++P+   + +V+  +  G+  ++FH       VSKR+VPNGPDPIHNR+   S++PP
Subjt:  LKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQ-WKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTAACTGTAGGTTCTTAAAGTCTCTGTTTGGAGCTTTTCTCTTTCTTGGTGTCATCTGGTTTTCTTTTATTGGAGTGATTGATAATGCTAGCCCAGCATCCAG
AAGAGCGACAGACGTGCAGTGGAAGATGATTGGAAGAGGGAAGCATGTCTTTCATTGGCATTCTGATTTTTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATC
CAATCCATAACAGGAGAGTAGGAAACTCTAAACAGCCACCAATTCGAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTAACTGTAGGTTCTTAAAGTCTCTGTTTGGAGCTTTTCTCTTTCTTGGTGTCATCTGGTTTTCTTTTATTGGAGTGATTGATAATGCTAGCCCAGCATCCAG
AAGAGCGACAGACGTGCAGTGGAAGATGATTGGAAGAGGGAAGCATGTCTTTCATTGGCATTCTGATTTTTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATC
CAATCCATAACAGGAGAGTAGGAAACTCTAAACAGCCACCAATTCGAGCCTAAACAAATCCTGGAGATGGATCAGCTGCAGAAAAAGATGAGAAATGAACAGTTATTTTT
TTCCTTTACCTGTAAATGTTCATCTTTGCTCTCCATCAAGGATAGATCCTGCATTGAGACTTTTGTCCCTGAAAGCACTGACATGGCTACTGTTCTTAGTGGGTTCTTGG
GAGTAGAAAAGAAAGAGATTTTGAATAACTTTCCCAGAAAATTCTCAGCTGTTGCTAGTCATCATTTATTTGATCTCAGATGCAAAGTGTTTGTTTCTTTCCTCGGAATT
TGAAGATTTTATAATGTTCCTTGTCGTTCATGCATAACTTGAATTTTCCATTCA
Protein sequenceShow/hide protein sequence
MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVGNSKQPPIRA