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CmoCh15G003210 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G003210
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTF-B3 domain-containing protein
Genome locationCmo_Chr15:1492244..1492801
RNA-Seq ExpressionCmoCh15G003210
SyntenyCmoCh15G003210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7023659.1 hypothetical protein CFC21_036134 [Triticum aestivum]4.7e-0650Show/hide
Query:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFS
        MLPASA++ P+LTKT KV KT  A +SP   N  PYQK  AH + VR  + P  IPA HD  +    G SC  S
Subjt:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFS
KAG5616499.1 hypothetical protein H5410_016323 [Solanum commersonii]9.4e-0746.07Show/hide
Query:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTV
        MLPASA+T P+LT   KV KT  A +SP   NL PYQK +A    VR    P PIPA  D  +   +G SCA S I R        VT+
Subjt:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTV
OWM71605.1 hypothetical protein CDL15_Pgr005792 [Punica granatum]3.4e-0959.38Show/hide
Query:  VRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASLLHCSWDLVA
        V+ W  P P PAY DCL+   VG S AFS+ILR+RS +EKAV VR  +TASAA+LL  SW L A
Subjt:  VRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASLLHCSWDLVA
TrEMBL top hitse value%identityAlignment
A0A0A9HK05 Uncharacterized protein9.1e-1655.68Show/hide
Query:  INLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASLLHCSWDLVAFLDIFRRST
        ++L PYQK +AHV ++RL E P P PA HDC M    GPSCA+S   R+RSC+EKAV V+RLETASAASLL      + FLD+    T
Subjt:  INLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASLLHCSWDLVAFLDIFRRST
A0A0D3ETI3 TF-B3 domain-containing protein1.9e-0547.3Show/hide
Query:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFS
        MLPASA+  P+LTKT  V KT  A +SP   N  PYQK +AH +  R  + P  IPA HD  +    G SC  S
Subjt:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFS
A0A0E0G342 Uncharacterized protein1.8e-2457.63Show/hide
Query:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASL
        MLPASA+TRP+LT+ MKVWK+ LA++    I+L PYQK +AHV ++RL E PSP PA HDC M    GPSC  S   +MRS +EKAV VRRLETASAASL
Subjt:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASL

Query:  LHCSWDLVAFLDIFRRST
        L  +   + FLD+    T
Subjt:  LHCSWDLVAFLDIFRRST
A0A218WFM0 Uncharacterized protein1.7e-0959.38Show/hide
Query:  VRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASLLHCSWDLVA
        V+ W  P P PAY DCL+   VG S AFS+ILR+RS +EKAV VR  +TASAA+LL  SW L A
Subjt:  VRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASLLHCSWDLVA
A0A341RWW3 Uncharacterized protein2.3e-0650Show/hide
Query:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFS
        MLPASA++ P+LTKT KV KT  A +SP   N  PYQK  AH + VR  + P  IPA HD  +    G SC  S
Subjt:  MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCCAGCGTCGGCGATGACACGGCCGATGCTAACCAAAACCATGAAGGTTTGGAAGACACCTTTAGCAGTGGTTTCGCCTTGGGATATTAACTTGCTGCCGTACCA
GAAGTTCAAAGCCCATGTACAAATGGTGAGGCTTTGGGAGCAGCCGAGTCCAATTCCGGCATACCACGATTGCTTAATGCCTTGTCGGGTTGGGCCTTCTTGCGCCTTCT
CGAGCATTTTAAGGATGCGGTCTTGTGAAGAGAAGGCCGTGACGGTTCGGAGGTTGGAGACAGCCTCTGCGGCGAGCTTACTGCACTGTTCTTGGGATTTGGTGGCGTTT
TTGGACATCTTCCGTAGGAGTACTTGTCTTCTAATTACTGCTGGTTGGGCTGCGATTACTACAAGCGCCAGCCTCCATGAAATTATAAGCCCCATTGTGAATGCTACTAT
TACTGCTGAAATGGTTTGCATAATTAGAGCCATTCTATCGCCCACTAAGGATCGAACCTGCCCAAAAAGGAGCTCCCGGTCATACTTCAATACAAATTCATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCCAGCGTCGGCGATGACACGGCCGATGCTAACCAAAACCATGAAGGTTTGGAAGACACCTTTAGCAGTGGTTTCGCCTTGGGATATTAACTTGCTGCCGTACCA
GAAGTTCAAAGCCCATGTACAAATGGTGAGGCTTTGGGAGCAGCCGAGTCCAATTCCGGCATACCACGATTGCTTAATGCCTTGTCGGGTTGGGCCTTCTTGCGCCTTCT
CGAGCATTTTAAGGATGCGGTCTTGTGAAGAGAAGGCCGTGACGGTTCGGAGGTTGGAGACAGCCTCTGCGGCGAGCTTACTGCACTGTTCTTGGGATTTGGTGGCGTTT
TTGGACATCTTCCGTAGGAGTACTTGTCTTCTAATTACTGCTGGTTGGGCTGCGATTACTACAAGCGCCAGCCTCCATGAAATTATAAGCCCCATTGTGAATGCTACTAT
TACTGCTGAAATGGTTTGCATAATTAGAGCCATTCTATCGCCCACTAAGGATCGAACCTGCCCAAAAAGGAGCTCCCGGTCATACTTCAATACAAATTCATTGTAA
Protein sequenceShow/hide protein sequence
MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASLLHCSWDLVAF
LDIFRRSTCLLITAGWAAITTSASLHEIISPIVNATITAEMVCIIRAILSPTKDRTCPKRSSRSYFNTNSL