CuGenDBv2

Gene ID	CmoCh15G003510
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	proteasome assembly chaperone 3 isoform X1
Genome location	Cmo_Chr15:1646670..1649592
RNA-Seq Expression	CmoCh15G003510
Synteny	CmoCh15G003510
Gene Ontology terms	GO:0043248 - proteasome assembly (biological process)
InterPro domains	IPR018788 - Proteasome assembly chaperone 3

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0042745.1 uncharacterized protein E6C27_scaffold44G002440 [Cucumis melo var. makuwa]

9.1e-44

90.2

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Query:  MGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENK
        MGTMLQARKEEGM IH TFSVSTVFGKRDEVS L YSSLLLNNAAIDTWNFQPMLVACARQLIEQIS+SGSY+PLLISLGLKDHSVETM+GIVTAV++N+
Subjt:  MGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENK

Query:  LW
        LW
Subjt:  LW

KAG7016194.1 hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-60

86.18

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Query:  MESSGGTRFPVSHKQASSEIK---------------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWN
        MESSGGTRFPVSHKQASSEIK                     VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWN
Subjt:  MESSGGTRFPVSHKQASSEIK---------------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWN

Query:  FQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
        FQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Subjt:  FQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW

XP_022939014.1 uncharacterized protein LOC111445047 isoform X1 [Cucurbita moschata]

1.8e-44

74.15

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Query:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML
        MESSGGTRFPVSHKQASSEIK                VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDE                      PML
Subjt:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
        VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Subjt:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW

XP_022939015.1 uncharacterized protein LOC111445047 isoform X2 [Cucurbita moschata]

3.5e-43

73.97

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Query:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML
        MESSGGTRFPVSHKQASSEIK                VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDE                      PML
Subjt:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL
        VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL
Subjt:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL

XP_022993682.1 uncharacterized protein LOC111489603 isoform X1 [Cucurbita maxima]

9.1e-44

73.47

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Query:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML
        MESSGGTRFPVSHKQAS EIK                VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDE                      PML
Subjt:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
        VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Subjt:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TMV9 Uncharacterized protein

4.4e-44

90.2

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Query:  MGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENK
        MGTMLQARKEEGM IH TFSVSTVFGKRDEVS L YSSLLLNNAAIDTWNFQPMLVACARQLIEQIS+SGSY+PLLISLGLKDHSVETM+GIVTAV++N+
Subjt:  MGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENK

Query:  LW
        LW
Subjt:  LW

A0A6J1FFU1 uncharacterized protein LOC111445047 isoform X1

8.9e-45

74.15

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Query:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML
        MESSGGTRFPVSHKQASSEIK                VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDE                      PML
Subjt:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
        VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Subjt:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW

A0A6J1FLG3 uncharacterized protein LOC111445047 isoform X2

1.7e-43

73.97

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Query:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML
        MESSGGTRFPVSHKQASSEIK                VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDE                      PML
Subjt:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL
        VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL
Subjt:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL

A0A6J1JTJ3 uncharacterized protein LOC111489603 isoform X1

4.4e-44

73.47

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Query:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML
        MESSGGTRFPVSHKQAS EIK                VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDE                      PML
Subjt:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
        VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Subjt:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW

A0A6J1K306 uncharacterized protein LOC111489603 isoform X2

8.3e-43

73.29

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Query:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML
        MESSGGTRFPVSHKQAS EIK                VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDE                      PML
Subjt:  MESSGGTRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPML

Query:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL
        VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL
Subjt:  VACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G14710.1 CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

1.2e-25

48.23

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Query:  TRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQ
        T FPV H++ S E K                +IATQIGAMGT+L ARKEEGM++  TFSVS +FGKRDE                      PML A AR+
Subjt:  TRFPVSHKQASSEIK----------------VIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQ

Query:  LIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
        LIE IS     KPL++SLGLKDHS ET++ IV  V EN+LW
Subjt:  LIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW

Sequences

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CDS sequence

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ATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATCGGAAATCAAGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAA
GCGAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTATAGTAGTTTGTTACTG
AATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGCACGTCAGTTGATCGAACAAATCAGTTTATCAGGTTCATACAAGCCATTATTA
ATCTCTCTTGGCCTAAAAGACCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAA

mRNA sequence

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AACAAATGGTAGGTGGATTGACTTCGAAGTTGAAGAGTTGGTGAGCAAAGCAACTTGATTGACTTGACCCTAGTCAGGACACTTTGACTCTTCCTTCCCGCATGG
AAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATCGGAAATCAAGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGA
GGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTATAGTAGTTTGTTACTGAATA
ATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGCACGTCAGTTGATCGAACAAATCAGTTTATCAGGTTCATACAAGCCATTATTAATCT
CTCTTGGCCTAAAAGACCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAATATTTGACTTTTGCTGCTTAAACCCTCG
TTTTGTTCACATTCAGTAAGATACATATTTATATTCCTACTTCTGTGACCTTTTTTGGTGGGGTTTTGACGATTTTATTGGCAAATGACCTCTCGATTGTCTGAT
CAATAAGATAGTAGACACGAAAATGAGATTTCAATAGTAGATTGTGTGAATTAGCTCTATTTTTTTTTAGTTAACGATATATTAGTGAAGGTTCAAACATCTAAC
TTTAAGAATAGATGTAATAGCTTATCCTGTTTGTTGGAGAATGATACGTGGTTCACGGCATTCAAACATCTAACTTTAAGAAT

Protein sequence

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MESSGGTRFPVSHKQASSEIKVIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLL
ISLGLKDHSVETMRGIVTAVSENKLW

CmoCh15G003510 (gene) of Cucurbita moschata (Rifu) v1 genome