; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G003760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G003760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptiontRNA pseudouridine synthase B
Genome locationCmo_Chr15:1744641..1746306
RNA-Seq ExpressionCmoCh15G003760
SyntenyCmoCh15G003760
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0006396 - RNA processing (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR002501 - Pseudouridine synthase II, N-terminal
IPR014780 - tRNA pseudouridine synthase II, TruB
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578676.1 hypothetical protein SDJN03_23124, partial [Cucurbita argyrosperma subsp. sororia]1.0e-21390.91Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
        MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED

Query:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRP+KDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE

Query:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA
        IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATKLA
Subjt:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA

Query:  DRYQGMIKSYSGVFRLGEATSTWDADSAV
        DRYQGMIKSYSGVFRLGEATSTWDADSAV
Subjt:  DRYQGMIKSYSGVFRLGEATSTWDADSAV

XP_022938741.1 uncharacterized protein LOC111444875 [Cucurbita moschata]4.7e-21491.14Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
        MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED

Query:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE

Query:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA
        IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATKLA
Subjt:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA

Query:  DRYQGMIKSYSGVFRLGEATSTWDADSAV
        DRYQGMIKSYSGVFRLGEATSTWDADSAV
Subjt:  DRYQGMIKSYSGVFRLGEATSTWDADSAV

XP_022993331.1 uncharacterized protein LOC111489372 [Cucurbita maxima]4.5e-20989.28Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
        MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMII+ PIYPPMPPQNRRTP RIS DNSPELESSED
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED

Query:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRR+RMYGSDSDE+KKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE

Query:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA
        IGQ  PYLLTRHTELPAKWDSPCGTVVLVNKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATKLA
Subjt:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA

Query:  DRYQGMIKSYSGVFRLGEATSTWDADSAV
        DRYQGMIKSYSGVFRLGEATSTWDADSAV
Subjt:  DRYQGMIKSYSGVFRLGEATSTWDADSAV

XP_023550635.1 uncharacterized protein LOC111808717 [Cucurbita pepo subsp. pepo]7.7e-20988.81Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
        MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMI++RPIYPPMPPQNRRTP RISPDNSPELESSED
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED

Query:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDE+KKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
        YQLE+KYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETK+EVTNGVD KGLVFFDGGRPEKDNKGS KDVTEKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE

Query:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA
        IGQ  PYLLTRHTELPAKWDSPCGTVVLVNKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATKLA
Subjt:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA

Query:  DRYQGMIKSYSGVFRLGEATSTWDADSAV
        DRYQGMIKSYSGVFRLGEATSTWDADSAV
Subjt:  DRYQGMIKSYSGVFRLGEATSTWDADSAV

XP_038891059.1 uncharacterized protein LOC120080471 [Benincasa hispida]1.1e-17877.73Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFP--NSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESS
        M  S AL HAS+FFIRST M SS +L  F   SNLNHLHRF   NSLS LS RR STTSTPFPLQY+MII+RP YPP P QNRRTP RI  DNSPE +SS
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFP--NSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESS

Query:  EDPVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK
        EDP SE+GFESWVD+KLISESE+ SGKEGVVMDKA RKYYNKRRKRMYGSDSDE+ KTQDEGFVELKPEVVEFNTLHKREEELFFYD FAYPWEKDKHYK
Subjt:  EDPVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK

Query:  MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKD
        MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGV+K VGV+PE KV+VT+G+D+KGLVFFD G+PE +NKGSVKDVTEKKVEEFFKCLKKVPAKD
Subjt:  MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKD

Query:  SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATK
        SEIG   PYLLTRHTELPAKWDSPCGTVVL+NKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATK
Subjt:  SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATK

Query:  LADRYQGMIKSYSGVFRLGEATSTWDADSAV
        L +RYQGMIKSYSGVFRLGEATSTWDADS V
Subjt:  LADRYQGMIKSYSGVFRLGEATSTWDADSAV

TrEMBL top hitse value%identityAlignment
A0A0A0KP03 Uncharacterized protein3.3e-17376.33Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFP--NSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESS
        MA SPAL HASHFFIRSTLM SSKSL+ F PLSNLNHLHRF   NSLS LSLR  STT T FPLQY++II+RP YP  P QN RTPAR+S DNSPEL SS
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFP--NSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESS

Query:  EDPVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK
        EDP SELGF+SWVD+KLISE  + SGKEGVVMDKA RKYYNKRRKRMYGSDSDE+ +TQ EGFVELKPEVVEFNTLHKREEELFF+D FAYPWEKDKHYK
Subjt:  EDPVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK

Query:  MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKD
        M+YQLEKKYFPD+GLDKAFLGPGESNVEVNEQTKGR+GVRKA  VKPE  VEV NG+D+K +VFFD G+PEK+NKGSV DV+EKKVEEFFKCLKK PAKD
Subjt:  MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKD

Query:  SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATK
        S IGQ  PYLLTRH ELPAKWDSPCGTVVL+NKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATK
Subjt:  SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATK

Query:  LADRYQGMIKSYSGVFRLGEATSTWDADSAV
        L DRYQGMIKSYSGVFRLGEATSTWDADS V
Subjt:  LADRYQGMIKSYSGVFRLGEATSTWDADSAV

A0A1S3C8B0 uncharacterized protein LOC1034981183.2e-17677.03Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFP--NSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESS
        MA SPAL HASHFFIRSTLM SSKSL  F PLSNLNH HRF   NSLS LSLRR   TSTPFPLQY++II+RP YP  P QN RTPARIS DN PEL SS
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFP--NSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESS

Query:  EDPVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK
        EDP SELGF+SWVD+KLISES + SGKEGVVMDKA RKYYNKRRKRMYGSDSDE+ +TQDEGFVELKPEVVEFNTLHKREEELFF+D FAYPWEKDKHYK
Subjt:  EDPVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK

Query:  MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKD
        M+YQLEKKYFPD+GLDKAFLGPGESNVEVNEQTKGR+GV+KAV VKPET VEV NG+D+KG+VFFD G+PEK+NKGSV DVTEKKVEEFFKCLKK PAKD
Subjt:  MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKD

Query:  SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATK
        S+IGQ  PYLLTRH ELPA+WDSPCGTVVL+NKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATK
Subjt:  SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATK

Query:  LADRYQGMIKSYSGVFRLGEATSTWDADSAV
        L DRYQGMIK YSGVFRLGEATSTWDADS V
Subjt:  LADRYQGMIKSYSGVFRLGEATSTWDADSAV

A0A5A7T7S0 TruB_N domain-containing protein3.2e-17677.03Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFP--NSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESS
        MA SPAL HASHFFIRSTLM SSKSL  F PLSNLNH HRF   NSLS LSLRR   TSTPFPLQY++II+RP YP  P QN RTPARIS DN PEL SS
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFP--NSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESS

Query:  EDPVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK
        EDP SELGF+SWVD+KLISES + SGKEGVVMDKA RKYYNKRRKRMYGSDSDE+ +TQDEGFVELKPEVVEFNTLHKREEELFF+D FAYPWEKDKHYK
Subjt:  EDPVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYK

Query:  MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKD
        M+YQLEKKYFPD+GLDKAFLGPGESNVEVNEQTKGR+GV+KAV VKPET VEV NG+D+KG+VFFD G+PEK+NKGSV DVTEKKVEEFFKCLKK PAKD
Subjt:  MVYQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKD

Query:  SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATK
        S+IGQ  PYLLTRH ELPA+WDSPCGTVVL+NKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATK
Subjt:  SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATK

Query:  LADRYQGMIKSYSGVFRLGEATSTWDADSAV
        L DRYQGMIK YSGVFRLGEATSTWDADS V
Subjt:  LADRYQGMIKSYSGVFRLGEATSTWDADSAV

A0A6J1FDZ7 uncharacterized protein LOC1114448752.3e-21491.14Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
        MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED

Query:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE

Query:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA
        IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATKLA
Subjt:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA

Query:  DRYQGMIKSYSGVFRLGEATSTWDADSAV
        DRYQGMIKSYSGVFRLGEATSTWDADSAV
Subjt:  DRYQGMIKSYSGVFRLGEATSTWDADSAV

A0A6J1JSH8 uncharacterized protein LOC1114893722.2e-20989.28Show/hide
Query:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED
        MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMII+ PIYPPMPPQNRRTP RIS DNSPELESSED
Subjt:  MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSED

Query:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
        PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRR+RMYGSDSDE+KKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV
Subjt:  PVSELGFESWVDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMV

Query:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
        YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE
Subjt:  YQLEKKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSE

Query:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA
        IGQ  PYLLTRHTELPAKWDSPCGTVVLVNKPKG +   V   LR+                           + GHAGTLDPMATGLLIVCVGKATKLA
Subjt:  IGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLA

Query:  DRYQGMIKSYSGVFRLGEATSTWDADSAV
        DRYQGMIKSYSGVFRLGEATSTWDADSAV
Subjt:  DRYQGMIKSYSGVFRLGEATSTWDADSAV

SwissProt top hitse value%identityAlignment
A6LEL7 tRNA pseudouridine synthase B2.6e-1041.33Show/hide
Query:  NLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADSAV
        +L   F Y L +     + + GHAGTLDP+ATG++IVC G+ATK  D +Q   K Y    +LGE T ++D +  +
Subjt:  NLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADSAV

Q1QEP3 tRNA pseudouridine synthase B2.0e-1037.25Show/hide
Query:  VVLVNKPKGQSMVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADS
        V+LV+KP+G +      + +Y               L+K+      + GH GTLDPMATGLL +C+G+ATK +       KSY     LG  T T DAD 
Subjt:  VVLVNKPKGQSMVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADS

Query:  AV
         V
Subjt:  AV

Q4FVL3 tRNA pseudouridine synthase B2.0e-1037.25Show/hide
Query:  VVLVNKPKGQSMVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADS
        V+LV+KP+G +      + +Y               L+K+      + GH GTLDPMATGLL +C+G+ATK +       KSY     LG  T T DAD 
Subjt:  VVLVNKPKGQSMVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADS

Query:  AV
         V
Subjt:  AV

Q72ER4 tRNA pseudouridine synthase B3.8e-0949.23Show/hide
Query:  KTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQG-MIKSYSGVFRLGEATSTWDADSAV
        K     Q + GHAGTLDPMA G+L+V +G ATK++        K Y+G  RLGE T TWDA+  V
Subjt:  KTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQG-MIKSYSGVFRLGEATSTWDADSAV

Q9RB36 tRNA pseudouridine synthase B6.3e-1236.54Show/hide
Query:  GTVVLVNKPKGQSMVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDA
        G V+L++KP   S   A  + +Y       L ++      K   P + + GHAGTLDP+ATGLL++C GK TK     QG  K Y+G F +G  T ++D 
Subjt:  GTVVLVNKPKGQSMVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDA

Query:  DSAV
        ++ +
Subjt:  DSAV

Arabidopsis top hitse value%identityAlignment
AT3G57150.1 homologue of NAP579.0e-0654.55Show/hide
Query:  GHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEA
        GH+GTLDP  TG LIVC+ +AT+L    QG  K Y  V RL  A
Subjt:  GHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEA

AT5G14460.1 Pseudouridine synthase family protein1.4e-9450.8Show/hide
Query:  LSHASHF--FIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSEDPVSE
        ++ + HF   + S+   S  S  FF  +    ++H+ P   SL      STTST +PLQYDMII+RP    +  QNRR P +     +P+    E     
Subjt:  LSHASHF--FIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSEDPVSE

Query:  LGFESWVDQKLISESESA-SGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQ--DEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVY
          F+SWVD KL  E E    G     MDKAKRKYY+KRRKR+YGSDS++E  ++  DEGFVELKPEVVEF+ LH+REEEL+FYDTFAYPWEKDKHYKMVY
Subjt:  LGFESWVDQKLISESESA-SGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQ--DEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVY

Query:  QLEKKYFPDEGLDKAFLGPGE--SNVEVNEQTKGRKGVRKAVGVKPE--TKVEVTN-GVDEKGLVFFDGGRPEKDNKGSVKD---VTEKKVEEFFKCLKK
        QLEKKY+PD+ LDKAFL PGE     + + + +G+K V  A+G K     ++ + N   D+  LVFFD  + +++ K S  D   VTEKKVE+FFK L K
Subjt:  QLEKKYFPDEGLDKAFLGPGE--SNVEVNEQTKGRKGVRKAVGVKPE--TKVEVTN-GVDEKGLVFFDGGRPEKDNKGSVKD---VTEKKVEEFFKCLKK

Query:  VPAKD---SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLI
         P +    S  G   P+L+TR+ ELP +WD P GTV+LVNKPKG +   V   LR+                           + GHAGTLDPMATGLLI
Subjt:  VPAKD---SEIGQMGPYLLTRHTELPAKWDSPCGTVVLVNKPKGQS--MVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLI

Query:  VCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADSAV
        VCVGKATK+ DRYQGMIK YSGVFRLGEATST DADS V
Subjt:  VCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADSAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACATCACCTGCTCTATCTCATGCCTCCCATTTCTTCATTCGGTCCACGCTCATGGCTTCTTCCAAATCGCTCGCTTTCTTCTTCCCACTTTCAAACCTCAACCA
TCTCCACAGATTTCCCAATTCACTTTCTCTCTTATCGCTCCGCAGATCCTCGACCACTTCCACCCCATTCCCTCTCCAATACGATATGATCATCGACCGCCCCATTTATC
CTCCCATGCCCCCTCAGAACCGACGAACACCCGCTAGAATCAGCCCCGACAACTCTCCCGAGCTCGAGTCCTCCGAGGATCCCGTTTCCGAACTGGGGTTCGAGAGCTGG
GTGGATCAGAAGCTTATTTCCGAGAGTGAATCTGCGTCCGGTAAAGAAGGCGTGGTCATGGACAAGGCTAAGAGGAAATACTATAATAAAAGAAGGAAGAGGATGTATGG
GTCCGATTCTGATGAAGAAAAGAAGACACAGGACGAGGGGTTTGTGGAATTAAAGCCTGAGGTGGTTGAGTTCAACACATTGCATAAGAGAGAGGAGGAATTGTTCTTCT
ATGACACTTTTGCGTATCCGTGGGAGAAAGATAAGCATTACAAAATGGTGTATCAGTTAGAGAAAAAGTATTTCCCTGATGAAGGTCTTGACAAGGCTTTTCTGGGACCT
GGAGAGTCAAATGTGGAAGTGAATGAACAGACAAAGGGAAGGAAGGGGGTGAGAAAGGCAGTGGGGGTTAAGCCCGAGACAAAAGTGGAGGTCACAAATGGCGTGGATGA
AAAAGGGTTGGTTTTCTTTGATGGGGGGAGACCAGAAAAGGATAATAAAGGGTCAGTGAAAGATGTGACAGAGAAGAAGGTGGAGGAGTTCTTCAAGTGTTTGAAGAAAG
TTCCAGCCAAAGATTCTGAAATTGGTCAGATGGGGCCATATCTTTTGACGAGACATACAGAGCTCCCTGCCAAATGGGATAGTCCTTGTGGGACAGTGGTTTTGGTGAAC
AAACCTAAAGGTCAGTCTATGGTTTATGCAGCCCTTCGAAAGGAATACCCTAATGAACAATATGATAATTTAACGGTGGACTTCATTTACGGTCTGTGGAAAACTTCGGC
GCCTAGTCAAAGTGAAAAAGGTCATGCAGGTACTCTTGATCCTATGGCTACTGGATTGTTGATAGTTTGTGTTGGTAAAGCGACTAAGTTGGCAGACAGATATCAAGGTA
TGATCAAGAGCTACAGTGGAGTTTTCCGTTTAGGAGAGGCTACTTCAACTTGGGATGCTGATTCAGCGGTGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACATCACCTGCTCTATCTCATGCCTCCCATTTCTTCATTCGGTCCACGCTCATGGCTTCTTCCAAATCGCTCGCTTTCTTCTTCCCACTTTCAAACCTCAACCA
TCTCCACAGATTTCCCAATTCACTTTCTCTCTTATCGCTCCGCAGATCCTCGACCACTTCCACCCCATTCCCTCTCCAATACGATATGATCATCGACCGCCCCATTTATC
CTCCCATGCCCCCTCAGAACCGACGAACACCCGCTAGAATCAGCCCCGACAACTCTCCCGAGCTCGAGTCCTCCGAGGATCCCGTTTCCGAACTGGGGTTCGAGAGCTGG
GTGGATCAGAAGCTTATTTCCGAGAGTGAATCTGCGTCCGGTAAAGAAGGCGTGGTCATGGACAAGGCTAAGAGGAAATACTATAATAAAAGAAGGAAGAGGATGTATGG
GTCCGATTCTGATGAAGAAAAGAAGACACAGGACGAGGGGTTTGTGGAATTAAAGCCTGAGGTGGTTGAGTTCAACACATTGCATAAGAGAGAGGAGGAATTGTTCTTCT
ATGACACTTTTGCGTATCCGTGGGAGAAAGATAAGCATTACAAAATGGTGTATCAGTTAGAGAAAAAGTATTTCCCTGATGAAGGTCTTGACAAGGCTTTTCTGGGACCT
GGAGAGTCAAATGTGGAAGTGAATGAACAGACAAAGGGAAGGAAGGGGGTGAGAAAGGCAGTGGGGGTTAAGCCCGAGACAAAAGTGGAGGTCACAAATGGCGTGGATGA
AAAAGGGTTGGTTTTCTTTGATGGGGGGAGACCAGAAAAGGATAATAAAGGGTCAGTGAAAGATGTGACAGAGAAGAAGGTGGAGGAGTTCTTCAAGTGTTTGAAGAAAG
TTCCAGCCAAAGATTCTGAAATTGGTCAGATGGGGCCATATCTTTTGACGAGACATACAGAGCTCCCTGCCAAATGGGATAGTCCTTGTGGGACAGTGGTTTTGGTGAAC
AAACCTAAAGGTCAGTCTATGGTTTATGCAGCCCTTCGAAAGGAATACCCTAATGAACAATATGATAATTTAACGGTGGACTTCATTTACGGTCTGTGGAAAACTTCGGC
GCCTAGTCAAAGTGAAAAAGGTCATGCAGGTACTCTTGATCCTATGGCTACTGGATTGTTGATAGTTTGTGTTGGTAAAGCGACTAAGTTGGCAGACAGATATCAAGGTA
TGATCAAGAGCTACAGTGGAGTTTTCCGTTTAGGAGAGGCTACTTCAACTTGGGATGCTGATTCAGCGGTGTGTTGA
Protein sequenceShow/hide protein sequence
MATSPALSHASHFFIRSTLMASSKSLAFFFPLSNLNHLHRFPNSLSLLSLRRSSTTSTPFPLQYDMIIDRPIYPPMPPQNRRTPARISPDNSPELESSEDPVSELGFESW
VDQKLISESESASGKEGVVMDKAKRKYYNKRRKRMYGSDSDEEKKTQDEGFVELKPEVVEFNTLHKREEELFFYDTFAYPWEKDKHYKMVYQLEKKYFPDEGLDKAFLGP
GESNVEVNEQTKGRKGVRKAVGVKPETKVEVTNGVDEKGLVFFDGGRPEKDNKGSVKDVTEKKVEEFFKCLKKVPAKDSEIGQMGPYLLTRHTELPAKWDSPCGTVVLVN
KPKGQSMVYAALRKEYPNEQYDNLTVDFIYGLWKTSAPSQSEKGHAGTLDPMATGLLIVCVGKATKLADRYQGMIKSYSGVFRLGEATSTWDADSAVC