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CmoCh15G003900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G003900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein translocase subunit
Genome locationCmo_Chr15:1792422..1794072
RNA-Seq ExpressionCmoCh15G003900
SyntenyCmoCh15G003900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016228.1 hypothetical protein SDJN02_21334, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6793.06Show/hide
Query:  MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRPSDKAPWPYAWVQYTPGDPILPNQPNEGSIYSGSYAE
        MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRP      PYAWVQYTPGDPILPNQPNEGSIYSGSYAE
Subjt:  MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRPSDKAPWPYAWVQYTPGDPILPNQPNEGSIYSGSYAE

Query:  KKKRKAQLQEAKKKKKLSYDPSSYIDSKPVLSFGNLVHRHRQQN
        KKKRKAQLQEAKKKKKLSYD SS IDSKPVLSFGNLVH HRQ+N
Subjt:  KKKRKAQLQEAKKKKKLSYDPSSYIDSKPVLSFGNLVHRHRQQN

XP_022132599.1 uncharacterized protein LOC111005424 [Momordica charantia]4.4e-3159.59Show/hide
Query:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD
        MGLG+LRS+VRPLTR   SRP     P P   TS +  FH+ S     TQAPW F I NHFHSLTDTRFPKRRPSDK          P PYAWVQYTPG+
Subjt:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD

Query:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK
        PILPNQPNEGS+   +             AEKKKRKAQ QEAKKKK
Subjt:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK

XP_022992813.1 uncharacterized protein LOC111489033 [Cucurbita maxima]2.9e-4372.79Show/hide
Query:  MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGDPILPNQPNEG
        MGL ILRSIVRPLTRIATSRPPCPVTSTSAKLGFHV ST+APW FQI  HFHSLTDTRFPKRRPSDK          P PYAWVQYTPG+PILPNQPNEG
Subjt:  MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGDPILPNQPNEG

Query:  SIYSGS------------YAEKKKRKAQLQEAKKKK
        S+   +              EKKKRKAQLQEAKKKK
Subjt:  SIYSGS------------YAEKKKRKAQLQEAKKKK

XP_023002923.1 uncharacterized protein LOC111496683 [Cucurbita maxima]1.5e-2857.53Show/hide
Query:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD
        MGLGILRS +RPLTR   SRP     P P   TS K GF++ S     T+APW F I NHF+SLTDTR PKRRPSDK          P PYAWV+YTPG+
Subjt:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD

Query:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK
        PI PNQPNEGS+   +             AEKKKRKAQLQEAKKKK
Subjt:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK

XP_038890999.1 uncharacterized protein LOC120080411 [Benincasa hispida]3.0e-3260.27Show/hide
Query:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPST-----QAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD
        MGLGILRSIVRPLTRI+ SRP     P P   TS K GFH+PS      +APW F I NHFHSLT+TRFPKRRPSDK          P PYAWV YTPG+
Subjt:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPST-----QAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD

Query:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK
        PILPN PNEGS+   +             AEKKKRKAQ+QEAKKKK
Subjt:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK

TrEMBL top hitse value%identityAlignment
A0A0A0KUQ0 Uncharacterized protein1.8e-2754.79Show/hide
Query:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPSTQA-----PWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD
        MGLGILRSI+RPLTRI+ S P       P   T +K GFH+PST +     PW F I NHFHSLT+TR PKRRPS K          P PYAWV YTPG 
Subjt:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPSTQA-----PWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD

Query:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK
        PILPNQPNEGS+   +             +E+KKRKAQ+QEA KKK
Subjt:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK

A0A6J1BTI2 uncharacterized protein LOC1110054242.1e-3159.59Show/hide
Query:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD
        MGLG+LRS+VRPLTR   SRP     P P   TS +  FH+ S     TQAPW F I NHFHSLTDTRFPKRRPSDK          P PYAWVQYTPG+
Subjt:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD

Query:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK
        PILPNQPNEGS+   +             AEKKKRKAQ QEAKKKK
Subjt:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK

A0A6J1HFM5 uncharacterized protein LOC1114635168.3e-2855.41Show/hide
Query:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD
        MGLGILRS +RPLTR   SRP     P P    S K GF++ S     T+APW F I NHF+SLTDTRFPKRRPSDK          P PYAWV+YTPG+
Subjt:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD

Query:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKKKL
        PI PNQPNEGS+   +             AEKKKR+AQLQEA KKK +
Subjt:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKKKL

A0A6J1K0A4 uncharacterized protein LOC1114890331.4e-4372.79Show/hide
Query:  MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGDPILPNQPNEG
        MGL ILRSIVRPLTRIATSRPPCPVTSTSAKLGFHV ST+APW FQI  HFHSLTDTRFPKRRPSDK          P PYAWVQYTPG+PILPNQPNEG
Subjt:  MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGDPILPNQPNEG

Query:  SIYSGS------------YAEKKKRKAQLQEAKKKK
        S+   +              EKKKRKAQLQEAKKKK
Subjt:  SIYSGS------------YAEKKKRKAQLQEAKKKK

A0A6J1KV00 uncharacterized protein LOC1114966837.5e-2957.53Show/hide
Query:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD
        MGLGILRS +RPLTR   SRP     P P   TS K GF++ S     T+APW F I NHF+SLTDTR PKRRPSDK          P PYAWV+YTPG+
Subjt:  MGLGILRSIVRPLTRIATSRP-----PCPVTSTSAKLGFHVPS-----TQAPWSFQIGNHFHSLTDTRFPKRRPSDK---------APWPYAWVQYTPGD

Query:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK
        PI PNQPNEGS+   +             AEKKKRKAQLQEAKKKK
Subjt:  PILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G51010.1 unknown protein2.4e-1942.48Show/hide
Query:  MGLGILRSIVRPLTRIATSR-------PPCPVTSTSAK------LGFHVPSTQAPWSFQIGNHFH--SLTDTRFPKRRPSD---------KAPWPYAWVQ
        MG G +RSI+RPL+R   SR        P   T  +AK       G  +   + PW   + NHFH  SLTDTR PKRRP           K P PYA+VQ
Subjt:  MGLGILRSIVRPLTRIATSR-------PPCPVTSTSAK------LGFHVPSTQAPWSFQIGNHFH--SLTDTRFPKRRPSD---------KAPWPYAWVQ

Query:  YTPGDPILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKKKL
        YTPG PI  N PNEGS+   +             +EKKKR+A +QEAK+KK++
Subjt:  YTPGDPILPNQPNEGSIYSGS------------YAEKKKRKAQLQEAKKKKKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTGGAATTCTAAGATCCATTGTCCGACCCCTAACGAGGATCGCCACTTCCCGACCACCATGTCCGGTCACTTCCACTTCCGCGAAACTGGGGTTTCATGTCCC
TTCAACTCAAGCTCCTTGGTCGTTCCAAATTGGGAACCATTTCCACAGTTTGACCGACACTCGGTTTCCGAAGAGACGGCCCAGTGATAAAGCTCCTTGGCCATATGCTT
GGGTTCAATATACCCCTGGTGACCCAATTCTTCCCAATCAACCGAATGAAGGGAGCATTTATTCTGGTTCGTATGCTGAAAAAAAGAAGAGGAAAGCTCAGCTTCAAGAG
GCAAAGAAGAAGAAAAAACTAAGTTACGATCCAAGTTCATACATAGACAGCAAACCTGTCCTGTCTTTTGGTAACCTAGTACACAGACACAGACAGCAAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTTGGAATTCTAAGATCCATTGTCCGACCCCTAACGAGGATCGCCACTTCCCGACCACCATGTCCGGTCACTTCCACTTCCGCGAAACTGGGGTTTCATGTCCC
TTCAACTCAAGCTCCTTGGTCGTTCCAAATTGGGAACCATTTCCACAGTTTGACCGACACTCGGTTTCCGAAGAGACGGCCCAGTGATAAAGCTCCTTGGCCATATGCTT
GGGTTCAATATACCCCTGGTGACCCAATTCTTCCCAATCAACCGAATGAAGGGAGCATTTATTCTGGTTCGTATGCTGAAAAAAAGAAGAGGAAAGCTCAGCTTCAAGAG
GCAAAGAAGAAGAAAAAACTAAGTTACGATCCAAGTTCATACATAGACAGCAAACCTGTCCTGTCTTTTGGTAACCTAGTACACAGACACAGACAGCAAAACTAG
Protein sequenceShow/hide protein sequence
MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRPSDKAPWPYAWVQYTPGDPILPNQPNEGSIYSGSYAEKKKRKAQLQE
AKKKKKLSYDPSSYIDSKPVLSFGNLVHRHRQQN