; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G004060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G004060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCASP-like protein
Genome locationCmo_Chr15:1851378..1852147
RNA-Seq ExpressionCmoCh15G004060
SyntenyCmoCh15G004060
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016238.1 CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-6594.48Show/hide
Query:  ASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTID
        A  +  VLTFVFLLISIIVLGTTSKTVGD+K+QFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITK+DGGVLFDFFGDKVLSYFLLAGAAAALGSTID
Subjt:  ASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTID

Query:  LKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
        LKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
Subjt:  LKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT

XP_008458887.1 PREDICTED: CASP-like protein 4D1 [Cucumis melo]1.2e-6385.62Show/hide
Query:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
        MEAKM TKIASFVLRVLTFVFLL+SIIVLGT SKT+G++++ FHNVNSYR+AMATIIIGGAFNLLQIALALYRL+TK+DG +LFDF+GDKVLSYFLLAGA
Subjt:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA

Query:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP
        AAALGS++DLKAN+D LNSFFDQGNAAAALLLLAFLCSAI+SVLSS ALS+KP
Subjt:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP

XP_022939465.1 CASP-like protein 4D1 [Cucurbita moschata]5.8e-74100Show/hide
Query:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
        MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
Subjt:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA

Query:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
        AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
Subjt:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT

XP_022992769.1 CASP-like protein 4D1 [Cucurbita maxima]1.7e-7398.7Show/hide
Query:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
        MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITK+DGGVLFDFFGDKVLSYFLLAGA
Subjt:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA

Query:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
        AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSA+VSVLSSFALSHKPT
Subjt:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT

XP_023551429.1 CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]3.2e-7296.75Show/hide
Query:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
        ME KMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGD+K+QFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITK+DGGVLFDFFGDKVLSYFLLAGA
Subjt:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA

Query:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
        AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSA+VSVLSSFALSHKPT
Subjt:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT

TrEMBL top hitse value%identityAlignment
A0A1S3C911 CASP-like protein5.9e-6485.62Show/hide
Query:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
        MEAKM TKIASFVLRVLTFVFLL+SIIVLGT SKT+G++++ FHNVNSYR+AMATIIIGGAFNLLQIALALYRL+TK+DG +LFDF+GDKVLSYFLLAGA
Subjt:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA

Query:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP
        AAALGS++DLKAN+D LNSFFDQGNAAAALLLLAFLCSAI+SVLSS ALS+KP
Subjt:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP

A0A6J1BZ60 CASP-like protein7.2e-4671.81Show/hide
Query:  MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAAL
        MG+KIAS VLRV+TFVFL ISIIVL T S+      + FHNVNSYRFAMATIIIGGAFNLLQIAL+LY +I+KS G +LF F+GDKVLSY LL+GAAA L
Subjt:  MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAAL

Query:  GSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP
        G  IDL ANI+ + SFF +GNAAAALLL+AFLCSA +S+LSS ALS+KP
Subjt:  GSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP

A0A6J1C1A4 CASP-like protein6.8e-3653.37Show/hide
Query:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV-----GDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYF
        M A  G++IAS +LR+LTFV + IS++++ T SKTV      + K++F +V SYR+  A  +IG A +LLQIAL LY ++TKSDG   FD F DK+L+Y 
Subjt:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV-----GDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYF

Query:  LLAGAAAALGSTIDLKANIDWL-----NSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP
        LL+GA+A LG+ IDL++N   L     NSFFD+G+A+AA+LLLAF+CSA+VS+LSS AL  KP
Subjt:  LLAGAAAALGSTIDLKANIDWL-----NSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP

A0A6J1FMS6 CASP-like protein2.8e-74100Show/hide
Query:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
        MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
Subjt:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA

Query:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
        AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
Subjt:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT

A0A6J1JYE7 CASP-like protein8.2e-7498.7Show/hide
Query:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA
        MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITK+DGGVLFDFFGDKVLSYFLLAGA
Subjt:  MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGA

Query:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT
        AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSA+VSVLSSFALSHKPT
Subjt:  AAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT

SwissProt top hitse value%identityAlignment
A1XGB4 CASP-like protein PIMP11.8e-2244.3Show/hide
Query:  SFVLRVLTFVFLLISIIVLGTTSKTV----GDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKS----DGGVLFDFFGDKVLSYFLLAGAAA
        S ++R+LT + LLIS IV+ T ++TV    GD K++F +  +YR+ +AT+IIG A+ LLQIA ++  L T +    +G +LFDF+GDK +SYFL+ GAAA
Subjt:  SFVLRVLTFVFLLISIIVLGTTSKTV----GDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKS----DGGVLFDFFGDKVLSYFLLAGAAA

Query:  ALGSTIDLK--ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFAL
        + G T DLK     D  + F +  NAAA+L L+ F  +   S+ SS+ L
Subjt:  ALGSTIDLK--ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFAL

B9NBE5 CASP-like protein 4D16.8e-2542.5Show/hide
Query:  MGTKIASFVLRVLTFVFLLISIIVLGTTSKT----VGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLI------TKSDGGVLFDFFGDKVLSY
        M +++ +  LRVLTF FL++S++++ T + T    + + K++  +  SYR+ +A I  G  + +LQIAL L  +       T  DG ++FDF+GDKV+SY
Subjt:  MGTKIASFVLRVLTFVFLLISIIVLGTTSKT----VGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLI------TKSDGGVLFDFFGDKVLSY

Query:  FLLAGAAAALGSTIDLKANIDWL--NSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK
         L  GAAAA G+T +LK  +  L  + FF++G A+A+LLLL F+C+AI+SV SS+AL  K
Subjt:  FLLAGAAAALGSTIDLKANIDWL--NSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK

B9SXY8 CASP-like protein 4D11.6e-2642.68Show/hide
Query:  MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVG----DEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLIT-----KSDGGVLFDFFGDKVLSYF
        + +++A+ +LR+LTF+FL+ S+++L T + T+     + K+ F +V +YR+ +ATI+IG A+ +LQIA  LY + T       DG + FDFFGDKV+SY 
Subjt:  MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVG----DEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLIT-----KSDGGVLFDFFGDKVLSYF

Query:  LLAGAAAALGSTIDLK---ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFAL
        L+ GAAA   ST D+K   +     ++F ++G A+A+LLL+ F+C+A++SV SS+AL
Subjt:  LLAGAAAALGSTIDLK---ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFAL

C6T1Z6 CASP-like protein 4D11.3e-2844.81Show/hide
Query:  GTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDE--KLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLIT-----KSDGGVLFDFFGDKVLSYFLLA
        G++    +LRVLTFVFLLI++I++    +T  +   +++F+++ +YR+ ++TIIIG A+NLLQ+AL+++ +++       DGG LFDFFGDK++SY L++
Subjt:  GTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDE--KLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLIT-----KSDGGVLFDFFGDKVLSYFLLA

Query:  GAAAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK
        G+AA  G T++L   +   NSF D+ NA+A+LLL+AFL +A+ S  +SFAL  K
Subjt:  GAAAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK

Q56X75 CASP-like protein 4D25.5e-1936.88Show/hide
Query:  KIASFVLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLIT--KSDGGVLFDFFGDKVLSYFLLAGAA
        K+   +LRVLT VFL+I++I+L T S T+  +    K  F +V +YR+ ++  +IG  + ++Q+   +    T  K+      DF+GDK++SY +  G+A
Subjt:  KIASFVLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLIT--KSDGGVLFDFFGDKVLSYFLLAGAA

Query:  AALGSTIDLK---------ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK
        A  G T DLK          + D ++ FF +G A+A+LLL AF+C A++SV SSFA++ +
Subjt:  AALGSTIDLK---------ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK

Arabidopsis top hitse value%identityAlignment
AT2G39518.1 Uncharacterised protein family (UPF0497)3.9e-2036.88Show/hide
Query:  KIASFVLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLIT--KSDGGVLFDFFGDKVLSYFLLAGAA
        K+   +LRVLT VFL+I++I+L T S T+  +    K  F +V +YR+ ++  +IG  + ++Q+   +    T  K+      DF+GDK++SY +  G+A
Subjt:  KIASFVLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLIT--KSDGGVLFDFFGDKVLSYFLLAGAA

Query:  AALGSTIDLK---------ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK
        A  G T DLK          + D ++ FF +G A+A+LLL AF+C A++SV SSFA++ +
Subjt:  AALGSTIDLK---------ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK

AT2G39530.1 Uncharacterised protein family (UPF0497)7.4e-1937.82Show/hide
Query:  VLRVLTFVFLLISIIVLGTTSKTV----GDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVL--FDFFGDKVLSYFLLAGAAAALGS
        +LRVLT  FLLI+++++ T + T+       KL F++V +YR+ ++  +IG  + ++Q+ L + +  T     +   FDF+GDKV+SY L  G+AA  G 
Subjt:  VLRVLTFVFLLISIIVLGTTSKTV----GDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVL--FDFFGDKVLSYFLLAGAAAALGS

Query:  TIDLK---------ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP
        + DLK          + D ++ FF +G A+A+LLL AF+  A++SV SS ALS +P
Subjt:  TIDLK---------ANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCTTAATTTCCATCATAGTTCTTGGAACCACTTCCAAGACCGTAGG
AGATGAGAAGCTTCAATTCCATAATGTCAATTCCTATAGGTTTGCAATGGCGACGATCATCATTGGAGGAGCATTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTC
TCATAACCAAATCCGACGGCGGCGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTG
AAGGCCAATATTGACTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTCCTATGCAGTGCTATAGTTTCTGTTCTTTCCTCTTT
TGCCCTTTCTCACAAACCTACTTAG
mRNA sequenceShow/hide mRNA sequence
TGTGGAAACAAAAAGCAAAGGGCATTTTTTGGGCTATAAAAGGTGAACCAGTTAGAGATATTAAATTCATTACCAAGATCAGCAAAAATGGAAGCTAAAATGGGTACCAA
AATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCTTAATTTCCATCATAGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGAGAAGCTTCAATTCCATA
ATGTCAATTCCTATAGGTTTGCAATGGCGACGATCATCATTGGAGGAGCATTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAATCCGACGGCGGC
GTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGACTGGTTGAA
CTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTCCTATGCAGTGCTATAGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTT
AGTTTTGTTTTTTATTTATTGCAAAATTCATAGCACAATCTTTGTCGGACACCCTTTTATCAAATTCTTTCTCGTTTCATGTTCATGGAGTGTATTTTTCTCGGAGACAA
TTTTTAAATCAAATTTAATTATTTGGATC
Protein sequenceShow/hide protein sequence
MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDL
KANIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT