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CmoCh15G005400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G005400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCore-2 i-branching beta-n-acetylglucosaminyltransferase family protein
Genome locationCmo_Chr15:2566162..2570182
RNA-Seq ExpressionCmoCh15G005400
SyntenyCmoCh15G005400
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsIPR044174 - Glycosyltransferase BC10-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578829.1 hypothetical protein SDJN03_23277, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2795.45Show/hide
Query:  DRTGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFSGTEVIVGSFLLLI
        DRTGCWDGHPHLYSPEEVSPALTHTLRLSN SYSYFFARKFSLESLTP+MSFSGTEVIVGSFLLL+
Subjt:  DRTGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFSGTEVIVGSFLLLI

KAG7032923.1 hypothetical protein SDJN02_06974, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-1672.88Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFSGTEVIVGS
        TGCWDGHPHLYSPEEVSPAL  TLR SNSSYS+FFARKFS E+LTP+M  +    + GS
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFSGTEVIVGS

XP_004140994.2 glycosyltransferase BC10 [Cucumis sativus]5.5e-1682.35Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TGCWDGHPHLYSPEEVSP L H LR+SNSSYSYFFARKFS ESLTP+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

XP_008456621.1 PREDICTED: uncharacterized protein LOC103496524 [Cucumis melo]5.0e-1786.27Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TGCWDGHPHLYSPEEVSP L HTLRLSNSSYSYFFARKFS ESLTP+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

XP_038886472.1 glycosyltransferase BC10 [Benincasa hispida]6.5e-1786.27Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TGCWDGHPHLYSPEEVSPAL HTLR SNSSYSYFFARKFS ESLTP+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

TrEMBL top hitse value%identityAlignment
A0A0A0K8K2 Uncharacterized protein2.7e-1682.35Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TGCWDGHPHLYSPEEVSP L H LR+SNSSYSYFFARKFS ESLTP+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

A0A1S3C397 uncharacterized protein LOC1034965242.4e-1786.27Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TGCWDGHPHLYSPEEVSP L HTLRLSNSSYSYFFARKFS ESLTP+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

A0A5A7SQB2 Uncharacterized protein2.4e-1786.27Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TGCWDGHPHLYSPEEVSP L HTLRLSNSSYSYFFARKFS ESLTP+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

A0A6J1BWZ7 uncharacterized protein LOC1110061013.5e-1682.35Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TGCWDGHPHLY+PEEVSPAL HTLR SNSSYSY FARKFS ESLTP+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

A0A6J1JT55 uncharacterized protein LOC1114872641.7e-1580.39Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TGCWDGHPHLYSPEEVSPAL  TLR SNSSYS+FFARKFS E+LTP+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52060.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein3.3e-1158.82Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TG   GHPH Y   E+SP L H+LR SNSS  YFFARKF+ ESL P+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

AT3G52060.2 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein3.3e-1158.82Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS
        TG   GHPH Y   E+SP L H+LR SNSS  YFFARKF+ ESL P+M  +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFS

AT5G22070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein1.2e-0847.27Show/hide
Query:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFSGTEV
        TG   GHP+ Y P+EV P L   LR SN S SYFFARKF+ + L P+++ + + +
Subjt:  TGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFSGTEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATCGGACAGGATGTTGGGATGGACATCCGCATTTGTACTCGCCGGAGGAGGTCTCTCCGGCGCTCACACACACATTGAGGCTATCGAATTCGAGCTAC
TCGTACTTCTTTGCAAGGAAGTTCTCGCTGGAATCCTTGACGCCGGTGATGTCATTTTCCGGGACTGAAGTGATTGTCGGCTCGTTTCTCTTACTGATAGTGTAA
mRNA sequenceShow/hide mRNA sequence
GTCCACCTTTCGAGTCATTATGAACACATTTTTTTAAATATTAGATTTATGGATACGAGTCTCATATTTCAAAGGGTCTTATTATGTTCCTATGACGCTCGAGGA
AGCCTTCGGACTTAAAAGAGGTCTATTAAAAAAGCCTACATTTGATTTTTCAAATTTTCTTTTCCAAAATTACCCTTCCATGAATTCCCTCACATTTTCACTCAT
TTTCCCGCTCCCCACTGTACGAGCGATACACCGCCAGGCCAGGGGAGCCACCGCGATGCTCTCTGAAGTGTCGTTTGGGCGATTCTCAGTCGGATCGCAGTTCTT
CATTCTGGCTCGCAACCACGCGGTGCTGGTGGTGAAAGAGAGAAAACTCTAGAGGAAGTGCGAGGAACCGTGGCCTGAGGAGCATTACTTGCCGACATTGTTGTC
CATGAAGGATCGGACAGGATGTTGGGATGGACATCCGCATTTGTACTCGCCGGAGGAGGTCTCTCCGGCGCTCACACACACATTGAGGCTATCGAATTCGAGCTA
CTCGTACTTCTTTGCAAGGAAGTTCTCGCTGGAATCCTTGACGCCGGTGATGTCATTTTCCGGGACTGAAGTGATTGTCGGCTCGTTTCTCTTACTGATAGTGTA
A
Protein sequenceShow/hide protein sequence
MKDRTGCWDGHPHLYSPEEVSPALTHTLRLSNSSYSYFFARKFSLESLTPVMSFSGTEVIVGSFLLLIV