; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G005440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G005440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSHSP domain-containing protein
Genome locationCmo_Chr15:2586023..2586784
RNA-Seq ExpressionCmoCh15G005440
SyntenyCmoCh15G005440
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]1.3e-2155.05Show/hide
Query:  MSSQIVEQDWGD-VTRSDQPFSPDTKW--AEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQT
        MSSQIV QDW + VT+ +Q F P   +  +EE++    SMKLPGF K++L+I LN  TR + VTGQK DGLFNI RLNER++I + C L+GV A+L + T
Subjt:  MSSQIVEQDWGD-VTRSDQPFSPDTKW--AEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQT

Query:  LFVTFSKKK
        L VTF K+K
Subjt:  LFVTFSKKK

KAG6578833.1 Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2796.97Show/hide
Query:  MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQD
        MSSQIVEQDW DVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKN+LQITLNAATRTLTVTGQKQD
Subjt:  MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQD

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5097.17Show/hide
Query:  MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV
        MSSQIVEQDW DVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKN+LQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHD TLFV
Subjt:  MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV

Query:  TFSKKK
        TFSKKK
Subjt:  TFSKKK

XP_018442964.1 PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Raphanus sativus]5.5e-0737.63Show/hide
Query:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK
        TRS Q F P T+W  E  + IL + LPGF K Q+++ +   TR L +TG++  G    IR  + + I  T  +D V A   D  L++  SK K
Subjt:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]1.1e-52100Show/hide
Query:  MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV
        MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV
Subjt:  MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV

Query:  TFSKKK
        TFSKKK
Subjt:  TFSKKK

TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein6.5e-2255.05Show/hide
Query:  MSSQIVEQDWGD-VTRSDQPFSPDTKW--AEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQT
        MSSQIV QDW + VT+ +Q F P   +  +EE++    SMKLPGF K++L+I LN  TR + VTGQK DGLFNI RLNER++I + C L+GV A+L + T
Subjt:  MSSQIVEQDWGD-VTRSDQPFSPDTKW--AEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQT

Query:  LFVTFSKKK
        L VTF K+K
Subjt:  LFVTFSKKK

A0A397XKR4 SHSP domain-containing protein5.9e-0737.63Show/hide
Query:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK
        TR  Q F P T+W  E  + IL + LPGF K Q+++ +   TR L +TG++  G    IR    I+I  T  +D V A   D  L++  SK K
Subjt:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK

A0A3P6EPU1 SHSP domain-containing protein7.8e-0736.56Show/hide
Query:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK
        TR  Q F P T+W  E  + IL + LPGF K Q+++ +   TR L +TG++  G    IR    I++  T  +D V A   D  L++  SK K
Subjt:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK

A0A6J0K7J7 inactive protein RESTRICTED TEV MOVEMENT 2-like2.7e-0737.63Show/hide
Query:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK
        TRS Q F P T+W  E  + IL + LPGF K Q+++ +   TR L +TG++  G    IR  + + I  T  +D V A   D  L++  SK K
Subjt:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK

A0A6J1FGX8 uncharacterized protein LOC1114452975.5e-53100Show/hide
Query:  MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV
        MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV
Subjt:  MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV

Query:  TFSKKK
        TFSKKK
Subjt:  TFSKKK

SwissProt top hitse value%identityAlignment
D5K211 Inactive protein RESTRICTED TEV MOVEMENT 23.1e-0525Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK
        + F P ++W ++  + IL++ L GF K Q+++T   +++ + VTG++        R NE  ++   C +D +     +  L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK

D9UBX4 Inactive protein RESTRICTED TEV MOVEMENT 22.4e-0525Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK
        + F P ++W ++  + IL++ L GF K Q+++T   +++ + VTG++        R NE  ++   C +D +     +  L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK

D9UBX6 Inactive protein RESTRICTED TEV MOVEMENT 22.4e-0525Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK
        + F P ++W ++  + IL++ L GF K Q+++T   +++ + VTG++        R NE  ++   C +D +     +  L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK

D9UC01 Inactive protein RESTRICTED TEV MOVEMENT 25.3e-0525Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK
        + F P ++W ++  + IL++ L GF K Q+++T   +++ + VTG++        R NE  ++   C +D +        L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK

Q9M670 Protein RESTRICTED TEV MOVEMENT 22.4e-0525Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK
        + F P ++W ++  + IL++ L GF K Q+++T   +++ + VTG++        R NE  ++   C +D +     +  L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK

Arabidopsis top hitse value%identityAlignment
AT2G27140.1 HSP20-like chaperones superfamily protein3.2e-0530.43Show/hide
Query:  DWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV
        D  +  R    F P + W  E+    L++ LPGF K QL++ +   TR L V G +  G    IR  +   I     +D V A+     L V
Subjt:  DWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFV

AT3G10680.1 HSP20-like chaperones superfamily protein3.2e-0531.34Show/hide
Query:  FSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSL
        F P  +W     S  L + LPGF ++Q++I  +  TRT+ + GQ+        R +E   + DTC +
Subjt:  FSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSL

AT5G04890.1 HSP20-like chaperones superfamily protein1.7e-0625Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK
        + F P ++W ++  + IL++ L GF K Q+++T   +++ + VTG++        R NE  ++   C +D +     +  L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK

AT5G20970.1 HSP20-like chaperones superfamily protein3.3e-1035.11Show/hide
Query:  VTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK
        + R  Q F P T+W  E  + +L   LPGF K QL++++  ATR L +TG++  G    IR ++ I +  T  +D V A   D  L++   K K
Subjt:  VTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCCAGATCGTGGAACAAGATTGGGGAGACGTAACTCGCTCAGATCAACCGTTTTCCCCCGATACAAAATGGGCAGAAGAGGAACACAGTCGAATACTG
AGCATGAAACTTCCAGGGTTTCCAAAGAATCAACTACAAATCACCTTGAATGCAGCAACAAGGACTCTTACAGTTACTGGACAGAAACAAGATGGCCTATTCAAC
ATTATTCGTTTGAACGAACGTATATCGATCGACGACACATGCTCCCTAGACGGAGTGTTTGCAAGACTGCATGATCAGACTCTTTTTGTTACCTTTTCCAAGAAG
AAATAA
mRNA sequenceShow/hide mRNA sequence
CTAAAATAGAAAGAGCCATATATAAATGCTTCTTCTCTTGCATGTACAAACACCCAATTCCATAGCCATCTAGCTCATTCTTTGGTGGTGGATAGAAGCACTTTC
AAAGATAAAATTACCATTTTACCCTTCTCCTCGAATTTTTTCACATCTTCGAACGTAAGCTAGAAAGCTCTTTCGATGTCGAGCCAGATCGTGGAACAAGATTGG
GGAGACGTAACTCGCTCAGATCAACCGTTTTCCCCCGATACAAAATGGGCAGAAGAGGAACACAGTCGAATACTGAGCATGAAACTTCCAGGGTTTCCAAAGAAT
CAACTACAAATCACCTTGAATGCAGCAACAAGGACTCTTACAGTTACTGGACAGAAACAAGATGGCCTATTCAACATTATTCGTTTGAACGAACGTATATCGATC
GACGACACATGCTCCCTAGACGGAGTGTTTGCAAGACTGCATGATCAGACTCTTTTTGTTACCTTTTCCAAGAAGAAATAAATCGTCATTTCAATCGAAATGAAG
ATTTACGTTCATAACGAATAATGATCATCTTCTATGTACATAATAGAGTTTATGTATTTCGATACCTGTAATTGAATCGTGTGTGAAGAACGATGTTATTGTGCA
CTTGAATATGAATAAATTGAATATTTACATTTATGTACCGGAAA
Protein sequenceShow/hide protein sequence
MSSQIVEQDWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSKK
K