; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G006090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G006090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr15:2958942..2960043
RNA-Seq ExpressionCmoCh15G006090
SyntenyCmoCh15G006090
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578893.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.0e-14499.22Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLVIVAA+QPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

KAG7016421.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.4e-14499.61Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

XP_022939277.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata]1.6e-145100Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

XP_022993917.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]4.0e-14499.22Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

XP_023550942.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo subsp. pepo]8.0e-14599.22Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGTIKDGVYIPDT+KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGV
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

TrEMBL top hitse value%identityAlignment
A0A6J1EIR2 Chlorophyll a-b binding protein, chloroplastic2.0e-14196.06Show/hide
Query:  AATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI
        AATSGA+LNGLGSPFLHGGSRTQTLLAGARGGVNVV SRKLVIVAAAQPKKSWIPAVKGGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        FAGT+KDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

A0A6J1FGC5 Chlorophyll a-b binding protein, chloroplastic7.8e-146100Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

A0A6J1JEC2 Chlorophyll a-b binding protein, chloroplastic5.2e-14296.08Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGA+LNGLGSPFLHGGSRTQTLLAGARGGVNVV SRKLVIVAAAQPKKSWIPAVKGGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGT+KDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic1.9e-14499.22Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

D1MWY9 Chlorophyll a-b binding protein, chloroplastic1.5e-14196.08Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSG VLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLV+VAAAQPKKSWIPAVKGGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPW RTAENFAN TGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic4.7e-3136.18Show/hide
Query:  SGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVI--VAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH
        +G+++    + FL GG R +         +  VGSR + +  VAA   +  W P          PEWLDGSLPGDFGFDPLGLG DP  LKW  +AEL+H
Subjt:  SGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVI--VAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH

Query:  GRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
         RWAM    GIF+ +  + I       W+ AG            +L   +L+L+GW E +RW D   P   + +   P      N    T + GYPGG +
Subjt:  GRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFE
        FDPLG+              K++ L+  EIK+ R+AMLA++  +F+
Subjt:  FDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFE

P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic2.6e-12282.56Show/hide
Query:  MAATSGAVLNGLGSPFLHGGSRTQTLLA---GARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYRE
        MA TS AVLNGL S FL GG+++Q LLA    AR G      R  V+ AAA  KKSWIPAV+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYRE
Subjt:  MAATSGAVLNGLGSPFLHGGSRTQTLLA---GARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYRE

Query:  AELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF
        AELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFF
Subjt:  AELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF

Query:  DPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        DPL  AGT+ +GVY+PDT+KLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALG+
Subjt:  DPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic4.9e-12182.49Show/hide
Query:  MAATSG-AVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAA-QPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREA
        M  TS  AVLNGL S FL GG +TQ LL GA     V   ++ V+ AAA  PKKSWIPAVK GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREA
Subjt:  MAATSG-AVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAA-QPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREA

Query:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD
        ELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFD
Subjt:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD

Query:  PLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        PL  AGT+ +GVY+PDT+KLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALG+
Subjt:  PLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

P36494 Chlorophyll a-b binding protein CP24, chloroplastic3.7e-12181.08Show/hide
Query:  AATSG-AVLNGLGSPFLHGGSR-TQTLL---AGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYR
        AATS  A++NG  SPFL GG + +Q+LL   +    GV+    + +V+ AAA PKKSWIPAVKGGGN +DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYR
Subjt:  AATSG-AVLNGLGSPFLHGGSR-TQTLL---AGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYR

Query:  EAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
        EAELIHGRWAM AV+GIFVGQAW+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGKF
Subjt:  EAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        FDPL  AGTI +GVY PDTDKLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic2.8e-3143.33Show/hide
Query:  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFN
        PEWLDGSLPGDFGFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +    + + E  +  D G+   F+   +L   Q++LMGW E +RW D   
Subjt:  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFN

Query:  PESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA
        P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  PESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 67.7e-12282.35Show/hide
Query:  ATSGAVLNGLGSPFLHGGSRTQTLLAGARG-GVNVVGSRKLVI-VAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        A SGAVL+GLGS FL GG R  T LA   G G   VG + L++  AAAQPKKSWIPAVKGGGN +DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  ATSGAVLNGLGSPFLHGGSRTQTLLAGARG-GVNVVGSRKLVI-VAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAV+GIFVGQAWSG+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAENFAN TG+QGYPGG+FFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV
        G AG  +DGVY PD +KLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

AT1G19150.1 photosystem I light harvesting complex gene 62.0e-3243.33Show/hide
Query:  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFN
        PEWLDGSLPGDFGFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +    + + E  +  D G+   F+   +L   Q++LMGW E +RW D   
Subjt:  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFN

Query:  PESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA
        P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  PESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 54.8e-3138.02Show/hide
Query:  GLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
        G+   FLH      +++      V   G    +    A  + +W+P       L  P +LDG+L GD+GFDPLGLG+DP  LKWY +AEL+H R+AM  V
Subjt:  GLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV

Query:  VGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
         GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG
Subjt:  VGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA
         A          D       KL EIK+ R+AM+AML F+ +A
Subjt:  FAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.2 photosystem I light harvesting complex gene 54.8e-3138.02Show/hide
Query:  GLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
        G+   FLH      +++      V   G    +    A  + +W+P       L  P +LDG+L GD+GFDPLGLG+DP  LKWY +AEL+H R+AM  V
Subjt:  GLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV

Query:  VGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
         GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG
Subjt:  VGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA
         A          D       KL EIK+ R+AM+AML F+ +A
Subjt:  FAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA

AT3G61470.1 photosystem I light harvesting complex gene 26.3e-3136.24Show/hide
Query:  GGVNVVGSRKLVIVAAAQPKKS------------WIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW
        GG  +   +KL + A ++P  S            W P          PEWLDGSLPGDFGFDPLGL  DP  LKW  +AE++H RWAM    GIF+ +  
Subjt:  GGVNVVGSRKLVIVAAAQPKKS------------WIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW

Query:  SGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIP
        + I       W+ AG            +L   +L+L+GW E +RW D   P S + +   P      N    T + GYPGG +FDPLG+           
Subjt:  SGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIP

Query:  DTDKLERLKLAEIKHARIAMLAMLIFYFE
           KL+ L+  EIK+ R+AMLA++  +F+
Subjt:  DTDKLERLKLAEIKHARIAMLAMLIFYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGGTTGGGCTCACCCTTCCTCCATGGCGGAAGCAGAACTCAGACCTTGCTGGCTGGAGCCAGAGGCGGTGTCAATGTCGT
TGGCTCTCGCAAGCTTGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGCGGAGGCAACTTAGTCGACCCAGAATGGCTAGATGGCTCAC
TTCCAGGTGACTTCGGCTTCGACCCATTAGGGTTGGGGAAGGACCCTGCATTTCTGAAATGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCGGTG
GTCGGAATCTTCGTAGGCCAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTCGGAACCCAGCT
TCTACTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAA
ACGCAACGGGAGAACAGGGTTATCCCGGCGGAAAATTCTTCGATCCGTTGGGATTTGCCGGAACTATTAAAGATGGGGTTTACATTCCGGACACGGACAAATTGGAGAGA
TTGAAGTTGGCTGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGGTTGGGCTCACCCTTCCTCCATGGCGGAAGCAGAACTCAGACCTTGCTGGCTGGAGCCAGAGGCGGTGTCAATGTCGT
TGGCTCTCGCAAGCTTGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGCGGAGGCAACTTAGTCGACCCAGAATGGCTAGATGGCTCAC
TTCCAGGTGACTTCGGCTTCGACCCATTAGGGTTGGGGAAGGACCCTGCATTTCTGAAATGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCGGTG
GTCGGAATCTTCGTAGGCCAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTCGGAACCCAGCT
TCTACTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAA
ACGCAACGGGAGAACAGGGTTATCCCGGCGGAAAATTCTTCGATCCGTTGGGATTTGCCGGAACTATTAAAGATGGGGTTTACATTCCGGACACGGACAAATTGGAGAGA
TTGAAGTTGGCTGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGAGTATAAGG
AAAAATGTTGTTGATTTTAAGGTAAAATTGTTCATAATTTCACTAGAAAAAAAAAATGGAGACACTGTGTTGATTGCCATTTCCAAGTCTGCCCTTTGCCTTATTTCAAC
TCGGTTATACAAGAACGTTGAAACTCGTCTCACTAAATGCGTTTTAAAAATTGTGAGGCCGACGACTATGCATAACGAACCAAATTGGATAATATCTACTAGTGGTGGC
Protein sequenceShow/hide protein sequence
MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLER
LKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV