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CmoCh15G006130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G006130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr15:2985673..2985963
RNA-Seq ExpressionCmoCh15G006130
SyntenyCmoCh15G006130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054914.1 hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa]2.4e-0645.1Show/hide
Query:  MGYSTANLMF-----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPP
        MG STAN++      ASIALRLP E  A A+  P PL  P         ++   +KV L  +A     +G+DE++ P SK+ K  RKPWPK PV K+PPP
Subjt:  MGYSTANLMF-----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPP

Query:  PF
        PF
Subjt:  PF

KAE8637368.1 hypothetical protein CSA_004461, partial [Cucumis sativus]1.7e-0445.16Show/hide
Query:  MGYSTANLMF-----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQP
        MG STAN++      ASIALRLP E  A A+  P PL  P        L++   +KV L  +A     SG+DE++ P  K+EKG RKPWPK P
Subjt:  MGYSTANLMF-----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQP

KAE8646678.1 hypothetical protein Csa_023589, partial [Cucumis sativus]3.1e-0648.84Show/hide
Query:  SIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPPPF
        SIALRLP E  A A+  P PL  P        L++   +KV L  +A     SG+DE++ P  K+EKG RKPWPK PV K+PPPPF
Subjt:  SIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPPPF

KAG6578898.1 hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3994.79Show/hide
Query:  MGYSTANLMF----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKASGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPPPF
        MGYSTANLMF    ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKASGEDEAEAPSSKDEKG RKPWPKQPVPKAPPPPF
Subjt:  MGYSTANLMF----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKASGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPPPF

KAG6578899.1 hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]7.9e-1861.17Show/hide
Query:  MGYSTANL----MFASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAE--APSSKDEKGGRKPWPKQPVPKAPP
        MGYSTANL    + ASIALR P    ASA+VGPSPLPPP  HS SG L F R IK+SL  KA     +GEDE+E   PSSK  +G R+PWPK+PV K+PP
Subjt:  MGYSTANL----MFASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAE--APSSKDEKGGRKPWPKQPVPKAPP

Query:  PPF
        PPF
Subjt:  PPF

TrEMBL top hitse value%identityAlignment
A0A0A0K9K2 Uncharacterized protein1.2e-0848.04Show/hide
Query:  MGYSTANLMF-----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPP
        MG STAN++      ASIALRLP E  A A+  P PL  P        L++   +KV L  +A     SG+DE++ P  K+EKG RKPWPK PV K+PPP
Subjt:  MGYSTANLMF-----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPP

Query:  PF
        PF
Subjt:  PF

A0A5A7UIB8 Uncharacterized protein1.1e-0645.1Show/hide
Query:  MGYSTANLMF-----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPP
        MG STAN++      ASIALRLP E  A A+  P PL  P         ++   +KV L  +A     +G+DE++ P SK+ K  RKPWPK PV K+PPP
Subjt:  MGYSTANLMF-----ASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKA-----SGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPP

Query:  PF
        PF
Subjt:  PF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTATTCGACGGCCAATCTAATGTTTGCATCCATCGCTCTAAGGCTGCCGTTGGAAGCCAGGGCAAGCGCCATGGTTGGCCCTTCTCCTCTGCCACCGCCGACATG
CCATTCACCTTCTGGGCAGCTATTATTTCGCCGCCCCATAAAGGTTAGCCTTACAGTGAAGGCTAGTGGAGAAGATGAAGCTGAAGCACCATCGTCCAAGGATGAAAAGG
GTGGCAGAAAACCATGGCCAAAGCAACCTGTCCCTAAAGCGCCACCACCTCCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTATTCGACGGCCAATCTAATGTTTGCATCCATCGCTCTAAGGCTGCCGTTGGAAGCCAGGGCAAGCGCCATGGTTGGCCCTTCTCCTCTGCCACCGCCGACATG
CCATTCACCTTCTGGGCAGCTATTATTTCGCCGCCCCATAAAGGTTAGCCTTACAGTGAAGGCTAGTGGAGAAGATGAAGCTGAAGCACCATCGTCCAAGGATGAAAAGG
GTGGCAGAAAACCATGGCCAAAGCAACCTGTCCCTAAAGCGCCACCACCTCCATTTTAG
Protein sequenceShow/hide protein sequence
MGYSTANLMFASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKASGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPPPF