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CmoCh15G006140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G006140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr15:2987046..2987363
RNA-Seq ExpressionCmoCh15G006140
SyntenyCmoCh15G006140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054914.1 hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa]3.1e-1050Show/hide
Query:  MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLP---PPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAK
        MG STAN+ I+ I VASIALR PS TTA A+  P PL     PIY++          +K+ L  +AG   ENG+ ES+  PPS + +  R+PWPK PV+K
Subjt:  MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLP---PPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAK

Query:  SPPPPF
        SPPPPF
Subjt:  SPPPPF

KAE8646678.1 hypothetical protein Csa_023589, partial [Cucumis sativus]2.5e-0444.83Show/hide
Query:  SIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAKSPPPPF
        SIALR P+ TTA A+  P PL  P        L +   +K+ L  +AG    +G+ ES+PP    K    R+PWPK PV+KSPPPPF
Subjt:  SIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAKSPPPPF

KAG6578898.1 hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]7.6e-1760.78Show/hide
Query:  MGYSTANLFIVILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAKSPPP
        MGYSTANL   ILVASIALR P    ASA+VGPSPLPPP  HS SG L F R IK+SL  KA     +GE E+E P    +  R R+PWPK+PV K+PPP
Subjt:  MGYSTANLFIVILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAKSPPP

Query:  PF
        PF
Subjt:  PF

KAG6578899.1 hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4498.06Show/hide
Query:  MGYSTANLFIVILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRR-PRRPWPKKPVAKSPP
        MGYSTANLFIVILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGE ESEPPPPSSKVRR PRRPWPKKPVAKSPP
Subjt:  MGYSTANLFIVILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRR-PRRPWPKKPVAKSPP

Query:  PPF
        PPF
Subjt:  PPF

TrEMBL top hitse value%identityAlignment
A0A0A0K9K2 Uncharacterized protein5.3e-0847.57Show/hide
Query:  MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAKSPP
        MG STAN+ I+ I VASIALR P+ TTA A+  P PL  P        L +   +K+ L  +AG    +G+ ES+PP    K    R+PWPK PV+KSPP
Subjt:  MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAKSPP

Query:  PPF
        PPF
Subjt:  PPF

A0A5A7UIB8 Uncharacterized protein1.5e-1050Show/hide
Query:  MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLP---PPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAK
        MG STAN+ I+ I VASIALR PS TTA A+  P PL     PIY++          +K+ L  +AG   ENG+ ES+  PPS + +  R+PWPK PV+K
Subjt:  MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLP---PPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAK

Query:  SPPPPF
        SPPPPF
Subjt:  SPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAAATGGGGTATTCCACGGCTAACCTATTCATTGTTATTTTGGTAGCATCCATTGCTCTAAGGCCACCGTCGGCAACCACCGCAAGCGCCGTCGTTGGCCCTTC
TCCTCTGCCGCCGCCGATATACCATTCAGCTTCTGGGACACTATCATTTGGCCGTTATATCAAAATTAGCCTTGAAGGGAAGGCAGGCCCTGTAGTGGAAAATGGAGAGT
ATGAATCTGAACCACCACCACCATCATCCAAGGTTAGACGCCCCAGACGACCATGGCCTAAGAAACCTGTCGCCAAATCGCCACCGCCTCCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAAAATGGGGTATTCCACGGCTAACCTATTCATTGTTATTTTGGTAGCATCCATTGCTCTAAGGCCACCGTCGGCAACCACCGCAAGCGCCGTCGTTGGCCCTTC
TCCTCTGCCGCCGCCGATATACCATTCAGCTTCTGGGACACTATCATTTGGCCGTTATATCAAAATTAGCCTTGAAGGGAAGGCAGGCCCTGTAGTGGAAAATGGAGAGT
ATGAATCTGAACCACCACCACCATCATCCAAGGTTAGACGCCCCAGACGACCATGGCCTAAGAAACCTGTCGCCAAATCGCCACCGCCTCCATTTTAG
Protein sequenceShow/hide protein sequence
MIKMGYSTANLFIVILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEYESEPPPPSSKVRRPRRPWPKKPVAKSPPPPF