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CmoCh15G006200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G006200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr15:3026022..3026489
RNA-Seq ExpressionCmoCh15G006200
SyntenyCmoCh15G006200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058917.1 hypothetical protein E6C27_scaffold98G00860 [Cucumis melo var. makuwa]1.1e-0637.63Show/hide
Query:  TRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEE-DASEFRHMVRFPGSS----------SSRSDSDSDR--------PSTSTSTSTSSSTFSDGRNGL
        +RKRK+K+ P PPR  KA          K IEVEE D   +       GS           SS SD   D+        P+  +    S + F+     L
Subjt:  TRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEE-DASEFRHMVRFPGSS----------SSRSDSDSDR--------PSTSTSTSTSSSTFSDGRNGL

Query:  SPSS-EELSVYDYEGWEDPLVIVNPRP---SSGIPP-------LTTYSGFDYSGLVYP------LPPVFKNPLPPLYYRPKFPDPN
        +PSS EELS+YDY GWE+      P P   SS I P       L+ ++  +    VYP      LPP+FK PLPPLYYRPK P PN
Subjt:  SPSS-EELSVYDYEGWEDPLVIVNPRP---SSGIPP-------LTTYSGFDYSGLVYP------LPPVFKNPLPPLYYRPKFPDPN

KAE8647158.1 hypothetical protein Csa_018821 [Cucumis sativus]8.0e-0735.38Show/hide
Query:  MESSATRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEEDASEFRHMV-RFPGSSSSRSDSDSDRPSTSTST-------------------STSSSTFS
        + S  +RKRK+K PP PPRA +A          K IEVEE    F +MV +    S S   S +D PS+S++T                     S + F+
Subjt:  MESSATRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEEDASEFRHMV-RFPGSSSSRSDSDSDRPSTSTST-------------------STSSSTFS

Query:  DGRNGLSPSSEELSVYDYEGWEDPLVIVNPRP---SSGIPPLTTYSG-----------------FDY-SGLVYPLPPVFKNPLPPLYYRPKFPDP
              S S  ELS++DY GWE+    +   P   SS I P    +G                 F Y   ++YPLPP+FK PLPPLYYRPKF  P
Subjt:  DGRNGLSPSSEELSVYDYEGWEDPLVIVNPRP---SSGIPPLTTYSG-----------------FDY-SGLVYPLPPVFKNPLPPLYYRPKFPDP

KAG6578907.1 hypothetical protein SDJN03_23355, partial [Cucurbita argyrosperma subsp. sororia]2.0e-7498.73Show/hide
Query:  MESSATRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEEDASEFRHMVRFPGSSSSRSDSDSDRP--STSTSTSTSSSTFSDGRNGLSPSSEELSVYDY
        MESSATRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEEDASEFRHMVRFPGSSSSRSDSDSDRP  STSTSTSTSSSTFSDGRNGLSPSSEELSVYDY
Subjt:  MESSATRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEEDASEFRHMVRFPGSSSSRSDSDSDRP--STSTSTSTSSSTFSDGRNGLSPSSEELSVYDY

Query:  EGWEDPLVIVNPRPSSGIPPLTTYSGFDYSGLVYPLPPVFKNPLPPLYYRPKFPDPN
        EGWEDPLVIVNPRPSSGIPPLTTYSGFDYSGLVYPLPPVFKNPLPPLYYRPKFPDPN
Subjt:  EGWEDPLVIVNPRPSSGIPPLTTYSGFDYSGLVYPLPPVFKNPLPPLYYRPKFPDPN

TrEMBL top hitse value%identityAlignment
A0A5D3DJD1 Uncharacterized protein5.1e-0737.63Show/hide
Query:  TRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEE-DASEFRHMVRFPGSS----------SSRSDSDSDR--------PSTSTSTSTSSSTFSDGRNGL
        +RKRK+K+ P PPR  KA          K IEVEE D   +       GS           SS SD   D+        P+  +    S + F+     L
Subjt:  TRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEE-DASEFRHMVRFPGSS----------SSRSDSDSDR--------PSTSTSTSTSSSTFSDGRNGL

Query:  SPSS-EELSVYDYEGWEDPLVIVNPRP---SSGIPP-------LTTYSGFDYSGLVYP------LPPVFKNPLPPLYYRPKFPDPN
        +PSS EELS+YDY GWE+      P P   SS I P       L+ ++  +    VYP      LPP+FK PLPPLYYRPK P PN
Subjt:  SPSS-EELSVYDYEGWEDPLVIVNPRP---SSGIPP-------LTTYSGFDYSGLVYP------LPPVFKNPLPPLYYRPKFPDPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTTCAGCCACCAGAAAGCGAAAGATGAAGAAGCCGCCGGCGCCGCCGAGAGCCGCGAAAGCCCAAGCGCCGGCGAAAATAAGGAAGTCGAAGAAAATCATTGA
AGTAGAAGAAGACGCCTCAGAGTTCAGGCACATGGTTCGATTCCCTGGCAGCAGTAGCAGCCGCTCCGACTCCGATTCCGACCGCCCTTCTACTTCCACTTCCACTTCTA
CTTCTTCTTCCACTTTTTCCGATGGCCGGAATGGTTTATCGCCGTCGTCGGAAGAACTGAGCGTTTATGATTACGAGGGCTGGGAAGACCCTCTTGTAATCGTAAATCCA
CGGCCCTCTTCCGGAATTCCTCCATTAACAACGTATTCCGGTTTTGATTACTCCGGTTTGGTTTATCCACTTCCGCCGGTTTTCAAGAACCCTCTGCCCCCGCTTTACTA
CCGGCCCAAATTTCCCGACCCCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTTCAGCCACCAGAAAGCGAAAGATGAAGAAGCCGCCGGCGCCGCCGAGAGCCGCGAAAGCCCAAGCGCCGGCGAAAATAAGGAAGTCGAAGAAAATCATTGA
AGTAGAAGAAGACGCCTCAGAGTTCAGGCACATGGTTCGATTCCCTGGCAGCAGTAGCAGCCGCTCCGACTCCGATTCCGACCGCCCTTCTACTTCCACTTCCACTTCTA
CTTCTTCTTCCACTTTTTCCGATGGCCGGAATGGTTTATCGCCGTCGTCGGAAGAACTGAGCGTTTATGATTACGAGGGCTGGGAAGACCCTCTTGTAATCGTAAATCCA
CGGCCCTCTTCCGGAATTCCTCCATTAACAACGTATTCCGGTTTTGATTACTCCGGTTTGGTTTATCCACTTCCGCCGGTTTTCAAGAACCCTCTGCCCCCGCTTTACTA
CCGGCCCAAATTTCCCGACCCCAATTAA
Protein sequenceShow/hide protein sequence
MESSATRKRKMKKPPAPPRAAKAQAPAKIRKSKKIIEVEEDASEFRHMVRFPGSSSSRSDSDSDRPSTSTSTSTSSSTFSDGRNGLSPSSEELSVYDYEGWEDPLVIVNP
RPSSGIPPLTTYSGFDYSGLVYPLPPVFKNPLPPLYYRPKFPDPN