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CmoCh15G006730 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G006730
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionE3 ubiquitin ligase BIG BROTHER-related-like
Genome locationCmo_Chr15:3289192..3290120
RNA-Seq ExpressionCmoCh15G006730
SyntenyCmoCh15G006730
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0046621 - negative regulation of organ growth (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0031624 - ubiquitin conjugating enzyme binding (molecular function)
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type
IPR033276 - E3 ubiquitin-protein ligase BIG BROTHER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578952.1 Proteasome subunit beta type-3-A, partial [Cucurbita argyrosperma subsp. sororia]1.2e-26100Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHS
        MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHS
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHS

KAG6602111.1 Proteasome subunit beta type-3-A, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2645.95Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLD-TNASF-------------------------------------------------------
        MALAMQQQEHE  YT L TIESDS+EDERSDSNS+NGLD TN SF                                                       
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLD-TNASF-------------------------------------------------------

Query:  -----------------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA
                                           QVEYEDSEELAALPCEHPYHSECI KW+QIKRVCPICGTEVSSPKPSKNA
Subjt:  -----------------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA

XP_022954880.1 E3 ubiquitin ligase BIG BROTHER-related [Cucurbita moschata]4.7e-2645.95Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLD-TNASF-------------------------------------------------------
        MALAMQQQEHE  YT L TIESDS+EDERSDSNS+NGLD TN SF                                                       
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLD-TNASF-------------------------------------------------------

Query:  -----------------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA
                                           QVEYEDSEELAALPCEHPYHSECI KW+QIKRVCPICGTEVSSPKPSKNA
Subjt:  -----------------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA

XP_022993933.1 E3 ubiquitin ligase BIG BROTHER-related-like [Cucurbita maxima]1.4e-3050Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNASF--------------------------------------------------------
        MALAMQQQEHEM YTTLGTIESDSDEDERSDSNSNNGLDTNAS                                                         
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNASF--------------------------------------------------------

Query:  --------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA
                                  QVEYED EELAALPCEHPYHS+CIVKWVQ KRVCPICGTEVSSPK SKNA
Subjt:  --------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA

XP_023551485.1 E3 ubiquitin ligase BIG BROTHER-related-like [Cucurbita pepo subsp. pepo]2.3e-2850Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDS--DEDERSDSNSNNGLDTNASF------------------------------------------------------
        MALAMQQQEHEM YTTLGTIESDS  DEDERSDSNSNNGLDTNAS                                                       
Subjt:  MALAMQQQEHEMPYTTLGTIESDS--DEDERSDSNSNNGLDTNASF------------------------------------------------------

Query:  ---------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP-KPSKNA
                                   QVEYED E+LAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP K SKNA
Subjt:  ---------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP-KPSKNA

TrEMBL top hitse value%identityAlignment
A0A0A0KFS4 RING-type domain-containing protein2.8e-2442.86Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNAS---------------------------------------------------------
        MALAMQQQEHE+ YTTL TI SDS+EDE SDSNSNNGLDTNA+                                                         
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNAS---------------------------------------------------------

Query:  --------------------------------FQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN
                                         QVEY+D EELAALPCEHPYHSECI +W+QIKRVCPICGTEVSSP  SKN
Subjt:  --------------------------------FQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN

A0A5D3CF09 E3 ubiquitin ligase BIG BROTHER-related-like1.3e-2138.97Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNAS---------------------------------------------------------
        MALAMQQQEHEM YTTL TI S+S+EDE SDSNSNNGL+TNA+                                                         
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNAS---------------------------------------------------------

Query:  ---------------------------------------------FQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN
                                                      QVEY+D EELAALPC+HPYHSECI +W+QIKRVCPICGTEVSSP  SKN
Subjt:  ---------------------------------------------FQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN

A0A6J1GTM7 E3 ubiquitin ligase BIG BROTHER-related2.3e-2645.95Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLD-TNASF-------------------------------------------------------
        MALAMQQQEHE  YT L TIESDS+EDERSDSNS+NGLD TN SF                                                       
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLD-TNASF-------------------------------------------------------

Query:  -----------------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA
                                           QVEYEDSEELAALPCEHPYHSECI KW+QIKRVCPICGTEVSSPKPSKNA
Subjt:  -----------------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA

A0A6J1JR32 E3 ubiquitin ligase BIG BROTHER-related-like8.1e-2444.32Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLD-TNASF-------------------------------------------------------
        MALAMQQQEHE  YT L TIESDS+EDERSDSNS+NGLD TN S                                                        
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLD-TNASF-------------------------------------------------------

Query:  -----------------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA
                                           QVEYEDSEELAALPCEHPYHSECI KW+QIKRVCPICGTEVSS K SKNA
Subjt:  -----------------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA

A0A6J1K3Q9 E3 ubiquitin ligase BIG BROTHER-related-like6.8e-3150Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNASF--------------------------------------------------------
        MALAMQQQEHEM YTTLGTIESDSDEDERSDSNSNNGLDTNAS                                                         
Subjt:  MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNASF--------------------------------------------------------

Query:  --------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA
                                  QVEYED EELAALPCEHPYHS+CIVKWVQ KRVCPICGTEVSSPK SKNA
Subjt:  --------------------------QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA

SwissProt top hitse value%identityAlignment
Q8BP31 RING finger protein 1225.1e-0738.1Show/hide
Query:  EYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP
        +++  +EL  LPC+H +H +C+VKW++++ VCP+C   ++ P
Subjt:  EYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP

Q8GUU2 E3 ubiquitin protein ligase RIE13.9e-0758.82Show/hide
Query:  YEDSEELAALPCEHPYHSECIVKWVQIKRVCPIC
        YED  EL ALPC H +HS CIVKW++++  CP+C
Subjt:  YEDSEELAALPCEHPYHSECIVKWVQIKRVCPIC

Q8L649 E3 ubiquitin-protein ligase BIG BROTHER6.0e-0853.66Show/hide
Query:  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV
        Q++Y+  E    LPC+H YHSECI KW+ I +VCP+C +EV
Subjt:  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV

Q9H9V4 RING finger protein 1221.7e-0740.48Show/hide
Query:  EYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP
        +++  +EL  LPC+H +H +C+VKW++++ VCP+C   ++SP
Subjt:  EYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP

Q9LT17 E3 ubiquitin ligase BIG BROTHER-related1.4e-0942.03Show/hide
Query:  TIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSS
        TI S   +  +   N N   ++    +++YED E+L  LPC+H YHSECI  W++I +VCP+C  EVS+
Subjt:  TIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSS

Arabidopsis top hitse value%identityAlignment
AT2G01735.1 RING-finger protein for embryogenesis2.8e-0858.82Show/hide
Query:  YEDSEELAALPCEHPYHSECIVKWVQIKRVCPIC
        YED  EL ALPC H +HS CIVKW++++  CP+C
Subjt:  YEDSEELAALPCEHPYHSECIVKWVQIKRVCPIC

AT3G19910.1 RING/U-box superfamily protein1.0e-1042.03Show/hide
Query:  TIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSS
        TI S   +  +   N N   ++    +++YED E+L  LPC+H YHSECI  W++I +VCP+C  EVS+
Subjt:  TIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSS

AT3G47180.1 RING/U-box superfamily protein2.7e-1150Show/hide
Query:  SNSNNGLDTNASFQVEYEDSEELAAL-PCEHPYHSECIVKWVQIKRVCPICGTEVS
        S++ N +D     Q+E+E+ E L  L PC+HPYHSECI KW++ K++CPIC +E S
Subjt:  SNSNNGLDTNASFQVEYEDSEELAAL-PCEHPYHSECIVKWVQIKRVCPICGTEVS

AT3G63530.1 RING/U-box superfamily protein4.3e-0953.66Show/hide
Query:  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV
        Q++Y+  E    LPC+H YHSECI KW+ I +VCP+C +EV
Subjt:  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV

AT3G63530.2 RING/U-box superfamily protein4.3e-0953.66Show/hide
Query:  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV
        Q++Y+  E    LPC+H YHSECI KW+ I +VCP+C +EV
Subjt:  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTGGCAATGCAGCAGCAGGAGCATGAGATGCCCTATACGACGCTTGGGACCATCGAAAGTGATAGCGACGAAGATGAAAGGTCTGATTCCAATAGCAACAATGG
TCTCGACACCAATGCCTCCTTCCAAGTTGAATATGAGGATAGTGAAGAATTGGCTGCCCTTCCTTGTGAGCATCCTTACCATTCAGAGTGTATAGTAAAATGGGTTCAAA
TCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAAGCCTTCTAAAAATGCA
mRNA sequenceShow/hide mRNA sequence
TACGCCAACTGAAGTGAACTCAGATTTGATCATGGCCTTGGCAATGCAGCAGCAGGAGCATGAGATGCCCTATACGACGCTTGGGACCATCGAAAGTGATAGCGACGAAG
ATGAAAGGTCTGATTCCAATAGCAACAATGGTCTCGACACCAATGCCTCCTTCCAAGTTGAATATGAGGATAGTGAAGAATTGGCTGCCCTTCCTTGTGAGCATCCTTAC
CATTCAGAGTGTATAGTAAAATGGGTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAAGCCTTCTAAAAATGCA
Protein sequenceShow/hide protein sequence
MALAMQQQEHEMPYTTLGTIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKNA