; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh15G006930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G006930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic-like
Genome locationCmo_Chr15:3384093..3385642
RNA-Seq ExpressionCmoCh15G006930
SyntenyCmoCh15G006930
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578969.1 Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.9e-14498.89Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
        MAAQTMLLTSGACAGHK +FASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGK FRSALGLKEGGPLFGFTKANEL
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL

Query:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
Subjt:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

XP_022939950.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]3.4e-146100Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
        MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL

Query:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
Subjt:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

XP_022993721.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]1.0e-14298.15Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
        MAAQTMLLTSGACAGHK +FASIFT TLRPNAQVTRLLFNPSP HSV+LPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL

Query:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
Subjt:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

XP_023549599.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]4.8e-14096.3Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
        MAAQTMLLTSGACAGHK +FASIFT TLRPN Q T LLFNPSP HSVSLPARGFTTLA FKSRTKVPPKKV+KPKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGK FRSALGLKEGGPLFGFTKANEL
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL

Query:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
Subjt:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]6.1e-12789.74Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFVG
        MAAQTMLLTSG C GH +         LRPNAQ +RL FNP P HSVSLPARGFTTLA FKSRTK PPKKVSKP  KVEDGIFGTSGGIGFTKQNELFVG
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFVG

Query:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGPLFGFTKA
        RVAMIGFAASLLGE ITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGK+FRSALGLKEGGPLFGFTKA
Subjt:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGPLFGFTKA

Query:  NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEEDD+
Subjt:  NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein6.1e-12588.32Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPN-AQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFV
        MAAQTMLLTSG C GH +        +LRPN  Q TRL FNP P HSVSLP RGFTTLA FKSRTK PPKKV KP  KVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPN-AQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGPLFGFTK
        GRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGKSFRSALGLKEGGPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEEDD+
Subjt:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

A0A1S3CS23 photosystem II 22 kDa protein, chloroplastic1.0e-12488.69Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRP-NAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFV
        MAAQTMLLTSG C GH +        +LRP N Q TRL FNP P HSVSLPARGFT LA FKSRTK PPKKV KP  KVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRP-NAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGPLFGFTK
        GRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGKSFRSALGLKEGGPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEEDD+
Subjt:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

A0A5A7UZ08 Photosystem II 22 kDa protein1.0e-12488.69Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRP-NAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFV
        MAAQTMLLTSG C GH +        +LRP N Q TRL FNP P HSVSLPARGFT LA FKSRTK PPKKV KP  KVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRP-NAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGPLFGFTK
        GRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGKSFRSALGLKEGGPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEEDD+
Subjt:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

A0A6J1FP79 photosystem II 22 kDa protein, chloroplastic-like1.7e-146100Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
        MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL

Query:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
Subjt:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

A0A6J1JX49 photosystem II 22 kDa protein, chloroplastic-like5.0e-14398.15Show/hide
Query:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
        MAAQTMLLTSGACAGHK +FASIFT TLRPNAQVTRLLFNPSP HSV+LPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANEL

Query:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
Subjt:  FVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic1.7e-10373.84Show/hide
Query:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPP-----HSVSLPARGF--TTLAAFKSRTKVPPKKVSKP----KVEDGIFGTSGGIGFTK
        AQTMLLT+ A    K+D  S  +   R   +    LF PS P      S +  +  F  TT+A FKS+ K PPKKV+ P    KVEDGIFGTSGGIGFTK
Subjt:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPP-----HSVSLPARGF--TTLAAFKSRTKVPPKKVSKP----KVEDGIFGTSGGIGFTK

Query:  QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDP-ETAGLERAVIPPGKSFRSALGLKEGGP
        QNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP    GLE+AVIPPGKSF+SALGL EGGP
Subjt:  QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDP-ETAGLERAVIPPGKSFRSALGLKEGGP

Query:  LFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD
        LFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  LFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD

Q02060 Photosystem II 22 kDa protein, chloroplastic5.7e-10473.29Show/hide
Query:  MAAQTMLLTSGACAGHKID-----FASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQN
        MA   +L+  G    + ID        +    ++P +  + L F+P P  S S  +  F TLA FKS+ K  PKKV KP  KVEDG+FGTSGGIGFTK+N
Subjt:  MAAQTMLLTSGACAGHKID-----FASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFG
        ELFVGRVAMIGFAASLLGEGITGKGIL+QLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+D+P T GLE+AVIPPGK  RSALGLK  GPLFG
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD
        FTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E++D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic2.0e-10474.19Show/hide
Query:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGF-------TTLAAFKSRTKVPPKKVSKP----KVEDGIFGTSGGIGFTK
        AQTMLLT+ A    K+D  S  +   R   +    LF PS P   S     F       TT+A FKS+ K PPKKV+ P    KVEDGIFGTSGGIGFTK
Subjt:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGF-------TTLAAFKSRTKVPPKKVSKP----KVEDGIFGTSGGIGFTK

Query:  QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGP
        QNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP  A GLE+AVIPPGKSF+SALGL EGGP
Subjt:  QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKSFRSALGLKEGGP

Query:  LFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD
        LFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  LFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic8.6e-10073.29Show/hide
Query:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPP---HSVSLPARGF---TTLAAFKSRTKVPPKKV---SKPKVEDGIFGTSGGIGFTKQN
        AQTMLLT+ A    K+D  S  +   R   +     F PS P    S S  A      TT+A FKS+ K P KKV    K KVEDGIFGTSGGIGFTKQN
Subjt:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPP---HSVSLPARGF---TTLAAFKSRTKVPPKKV---SKPKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDP-ETAGLERAVIPPGKSFRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP    GL++AVIPPGK F+SALGL EGGPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDP-ETAGLERAVIPPGKSFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD
         FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD

Q9XF91 Photosystem II 22 kDa protein, chloroplastic5.7e-10476.01Show/hide
Query:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPAR--GFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFVG
        AQTMLLTSG  AGH   F    +P  +P  +V  L  + + P  V+LP+R   F  LA FK +TK  PKKV KP  KVEDGIFGTSGGIGFTK NELFVG
Subjt:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPAR--GFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFVG

Query:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        RVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP T GLE+AVIPPGK+ RSALGLKE GPLFGFTKAN
Subjt:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD
        ELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein4.1e-10576.01Show/hide
Query:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPAR--GFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFVG
        AQTMLLTSG  AGH   F    +P  +P  +V  L  + + P  V+LP+R   F  LA FK +TK  PKKV KP  KVEDGIFGTSGGIGFTK NELFVG
Subjt:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPAR--GFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFVG

Query:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        RVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP T GLE+AVIPPGK+ RSALGLKE GPLFGFTKAN
Subjt:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD
        ELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDD

AT1G44575.2 Chlorophyll A-B binding family protein1.6e-6472.77Show/hide
Query:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPAR--GFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFVG
        AQTMLLTSG  AGH   F    +P  +P  +V  L  + + P  V+LP+R   F  LA FK +TK  PKKV KP  KVEDGIFGTSGGIGFTK NELFVG
Subjt:  AQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPAR--GFTTLAAFKSRTKVPPKKVSKP--KVEDGIFGTSGGIGFTKQNELFVG

Query:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGG
        RVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP T GLE+AVIPPGK+ RSALGLKE G
Subjt:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGCGTGCGCCGGCCATAAGATAGATTTCGCTTCTATTTTCACTCCAACGCTTAGACCTAACGCCCAAGTTACT
CGCCTCCTTTTCAATCCTTCGCCTCCGCATTCCGTTTCCTTGCCGGCGCGTGGATTTACGACTCTTGCAGCTTTTAAATCCAGAACCAAAGTGCCGCCGAAGAAG
GTTTCGAAGCCGAAGGTTGAAGACGGCATTTTCGGGACTTCCGGTGGCATTGGTTTCACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCCATGATCGGCTTT
GCTGCATCTTTGTTAGGAGAGGGGATTACCGGGAAGGGAATTCTGGCGCAACTGAACTTGGAAACTGGAGTTCCGATTTACGAGGCGGAGCCTCTTCTTCTATTC
TTCATCTTGTTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTTATCGACGATCCAGAAACGGCTGGATTGGAACGCGCCGTCATCCCTCCC
GGGAAGAGCTTCAGATCGGCGCTAGGTCTCAAGGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCAAATGAGCTGTTCGTCGGGCGATTGGCGCAGCTAGGGTTT
GCGTTCTCGCTAATCGGAGAAATTATTACAGGAAAAGGTGCGTTGGCGCAGTTAAACATCGAGACGGGAGTGCCGATCAATGAGATCGAGCCTCTGGTATTGTTG
AACGTTGTGTTCTTCTTCATTGCTGCTCTGAATCCTGGAACTGGAAAGTTCGTCACCGACGAGGAAGATGATGATTGA
mRNA sequenceShow/hide mRNA sequence
CCCACCAATCCACCATCACAAAAAACTAAACGACGACGTGTCACTCTATGCGCCGATCGTCAAACTCTCCCCACCAAATCCACAAGCACATCCCATTTCACCATA
CACTCAAATTCCCTCTGATTTCTCGAAACCTTTCTTCTTAAAAGCCTATCCAAATTACTCACCCATTTGCTTAAGCTTTTTAAATCACAGGCTTCCCTGCATTAA
TCTCACTCGAATACCTTATAGCATTTTCATTTCGGTTCATTTCGGTTCATTTCCATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGCGTGCGCCGGCCATAAG
ATAGATTTCGCTTCTATTTTCACTCCAACGCTTAGACCTAACGCCCAAGTTACTCGCCTCCTTTTCAATCCTTCGCCTCCGCATTCCGTTTCCTTGCCGGCGCGT
GGATTTACGACTCTTGCAGCTTTTAAATCCAGAACCAAAGTGCCGCCGAAGAAGGTTTCGAAGCCGAAGGTTGAAGACGGCATTTTCGGGACTTCCGGTGGCATT
GGTTTCACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCCATGATCGGCTTTGCTGCATCTTTGTTAGGAGAGGGGATTACCGGGAAGGGAATTCTGGCGCAA
CTGAACTTGGAAACTGGAGTTCCGATTTACGAGGCGGAGCCTCTTCTTCTATTCTTCATCTTGTTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGA
AAATTTATCGACGATCCAGAAACGGCTGGATTGGAACGCGCCGTCATCCCTCCCGGGAAGAGCTTCAGATCGGCGCTAGGTCTCAAGGAAGGAGGTCCGTTGTTC
GGATTCACGAAGGCAAATGAGCTGTTCGTCGGGCGATTGGCGCAGCTAGGGTTTGCGTTCTCGCTAATCGGAGAAATTATTACAGGAAAAGGTGCGTTGGCGCAG
TTAAACATCGAGACGGGAGTGCCGATCAATGAGATCGAGCCTCTGGTATTGTTGAACGTTGTGTTCTTCTTCATTGCTGCTCTGAATCCTGGAACTGGAAAGTTC
GTCACCGACGAGGAAGATGATGATTGAACGGATCGATTCTGCTTTAATTTTCTTTGTACATGAACTTAGCAAATCCGCGAATTTCTCTTTAGGCTTGTGTTATTG
TAACATGTGTATTCTGCTTGAGCACCTAAAACAACGAAATCCGAGCAACAGACTTTGACTGGTAAATTGTTAAAAAATTATTATAAATATAAAACTTTATGGGAA
ATAATTATTCGAC
Protein sequenceShow/hide protein sequence
MAAQTMLLTSGACAGHKIDFASIFTPTLRPNAQVTRLLFNPSPPHSVSLPARGFTTLAAFKSRTKVPPKKVSKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGF
AASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGF
AFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAALNPGTGKFVTDEEDDD