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CmoCh15G007080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh15G007080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr15:3442588..3442929
RNA-Seq ExpressionCmoCh15G007080
SyntenyCmoCh15G007080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578979.1 DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]3.5e-17100Show/hide
Query:  MCSALDSATKLVESTTKSRFLQEKIVEELEHVLEKGHSTSAAAMVHPIQL
        MCSALDSATKLVESTTKSRFLQEKIVEELEHVLEKGHSTSAAAMVHPIQL
Subjt:  MCSALDSATKLVESTTKSRFLQEKIVEELEHVLEKGHSTSAAAMVHPIQL

XP_004140864.1 uncharacterized protein LOC101219718 [Cucumis sativus]6.2e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

XP_008445269.1 PREDICTED: uncharacterized protein LOC103488352 [Cucumis melo]6.2e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

XP_008445675.1 PREDICTED: uncharacterized protein LOC103488633 isoform X4 [Cucumis melo]6.2e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

XP_008445677.1 PREDICTED: uncharacterized protein LOC103488633 isoform X5 [Cucumis melo]6.2e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

TrEMBL top hitse value%identityAlignment
A0A0A0K969 Uncharacterized protein3.0e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

A0A1S3BCT2 uncharacterized protein LOC103488633 isoform X53.0e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

A0A1S3BE50 uncharacterized protein LOC103488633 isoform X43.0e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

A0A5A7V947 Uncharacterized protein3.0e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

A0A5D3BZV1 Uncharacterized protein3.0e-0678.26Show/hide
Query:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM
        KMCSALD+ATKLVEST + SRFL EKIV ELEHVLEKG +T  AAM
Subjt:  KMCSALDSATKLVEST-TKSRFLQEKIVEELEHVLEKGHSTSAAAM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGTTTGGCTTTGGTTATCAAGGAATGAAGAAGATGTGCAGTGCTCTTGATTCTGCTACTAAGTTGGTTGAATCAACCACAAAATCAAGATTTTTGCAGGAGAA
GATTGTGGAGGAGCTTGAACATGTTCTTGAAAAGGGACATTCTACAAGTGCAGCCGCCATGGTCCACCCTATCCAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGTTTGGCTTTGGTTATCAAGGAATGAAGAAGATGTGCAGTGCTCTTGATTCTGCTACTAAGTTGGTTGAATCAACCACAAAATCAAGATTTTTGCAGGAGAA
GATTGTGGAGGAGCTTGAACATGTTCTTGAAAAGGGACATTCTACAAGTGCAGCCGCCATGGTCCACCCTATCCAGTTGTAG
Protein sequenceShow/hide protein sequence
MIKFGFGYQGMKKMCSALDSATKLVESTTKSRFLQEKIVEELEHVLEKGHSTSAAAMVHPIQL